RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 ISY1Q9ULR0 285 aaKnown RBP17.96■□□□□ 0.47
LMBR1-201ENST00000353442 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
LMBR1-201ENST00000353442 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
LMBR1-201ENST00000353442 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
LMBR1-201ENST00000353442 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
LMBR1-201ENST00000353442 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
LMBR1-201ENST00000353442 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
LMBR1-201ENST00000353442 PRM3Q9NNZ6 103 aa17.89■□□□□ 0.45
LMBR1-201ENST00000353442 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
LMBR1-201ENST00000353442 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
LMBR1-201ENST00000353442 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
LMBR1-201ENST00000353442 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
LMBR1-201ENST00000353442 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
LMBR1-201ENST00000353442 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
LMBR1-201ENST00000353442 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.83■□□□□ 0.45
LMBR1-201ENST00000353442 SOX12O15370 315 aa17.79■□□□□ 0.44
LMBR1-201ENST00000353442 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
LMBR1-201ENST00000353442 PLCB2Q00722 1185 aa17.77■□□□□ 0.44
LMBR1-201ENST00000353442 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
LMBR1-201ENST00000353442 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
LMBR1-201ENST00000353442 TSPY4P0CV99 314 aa17.75■□□□□ 0.43
LMBR1-201ENST00000353442 TSPY10P0CW01 314 aa17.75■□□□□ 0.43
LMBR1-201ENST00000353442 GLIPR1L2Q4G1C9 344 aa17.74■□□□□ 0.43
LMBR1-201ENST00000353442 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
LMBR1-201ENST00000353442 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
LMBR1-201ENST00000353442 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
LMBR1-201ENST00000353442 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
LMBR1-201ENST00000353442 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
LMBR1-201ENST00000353442 FGD1P98174 961 aa17.71■□□□□ 0.43
LMBR1-201ENST00000353442 MLECQ14165 292 aa17.71■□□□□ 0.43
LMBR1-201ENST00000353442 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
LMBR1-201ENST00000353442 PDE4CQ08493 712 aa17.69■□□□□ 0.42
LMBR1-201ENST00000353442 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
LMBR1-201ENST00000353442 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
LMBR1-201ENST00000353442 TRIM44Q96DX7 344 aaPredicted RBP17.68■□□□□ 0.42
LMBR1-201ENST00000353442 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
LMBR1-201ENST00000353442 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
LMBR1-201ENST00000353442 KCNJ4P48050 445 aa17.63■□□□□ 0.41
LMBR1-201ENST00000353442 POGKQ9P215 609 aa17.61■□□□□ 0.41
LMBR1-201ENST00000353442 FTSJ3Q8IY81 847 aaKnown RBP17.61■□□□□ 0.41
LMBR1-201ENST00000353442 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
LMBR1-201ENST00000353442 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
LMBR1-201ENST00000353442 GOLGA6L22H0YM25 854 aa17.59■□□□□ 0.41
LMBR1-201ENST00000353442 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.41
LMBR1-201ENST00000353442 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
LMBR1-201ENST00000353442 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
LMBR1-201ENST00000353442 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
LMBR1-201ENST00000353442 BECN1Q14457 450 aa17.54■□□□□ 0.4
LMBR1-201ENST00000353442 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
LMBR1-201ENST00000353442 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
LMBR1-201ENST00000353442 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.39
LMBR1-201ENST00000353442 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
LMBR1-201ENST00000353442 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
LMBR1-201ENST00000353442 G3V3G9 751 aa17.49■□□□□ 0.39
LMBR1-201ENST00000353442 DCAF8Q5TAQ9 597 aa17.49■□□□□ 0.39
LMBR1-201ENST00000353442 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
LMBR1-201ENST00000353442 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
LMBR1-201ENST00000353442 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
LMBR1-201ENST00000353442 GNL2Q13823 731 aaKnown RBP17.45■□□□□ 0.38
LMBR1-201ENST00000353442 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
LMBR1-201ENST00000353442 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
LMBR1-201ENST00000353442 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
LMBR1-201ENST00000353442 APBB1O00213 710 aa17.42■□□□□ 0.38
LMBR1-201ENST00000353442 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
LMBR1-201ENST00000353442 RGS3P49796 1198 aa17.41■□□□□ 0.38
LMBR1-201ENST00000353442 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
LMBR1-201ENST00000353442 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
LMBR1-201ENST00000353442 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.376e-6■□□□□ 8.5
LMBR1-201ENST00000353442 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
LMBR1-201ENST00000353442 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
LMBR1-201ENST00000353442 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
LMBR1-201ENST00000353442 MSH5O43196 834 aa17.38■□□□□ 0.37
LMBR1-201ENST00000353442 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
LMBR1-201ENST00000353442 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
LMBR1-201ENST00000353442 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
LMBR1-201ENST00000353442 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
LMBR1-201ENST00000353442 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
LMBR1-201ENST00000353442 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
LMBR1-201ENST00000353442 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
LMBR1-201ENST00000353442 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
LMBR1-201ENST00000353442 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
LMBR1-201ENST00000353442 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
LMBR1-201ENST00000353442 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
LMBR1-201ENST00000353442 RTN4Q9NQC3 1192 aaKnown RBP17.33■□□□□ 0.37
LMBR1-201ENST00000353442 STK26Q9P289 416 aa17.33■□□□□ 0.37
LMBR1-201ENST00000353442 SRPK2P78362 688 aaKnown RBP17.32■□□□□ 0.36
LMBR1-201ENST00000353442 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
LMBR1-201ENST00000353442 CREBRFQ8IUR6 639 aa17.31■□□□□ 0.36
LMBR1-201ENST00000353442 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
LMBR1-201ENST00000353442 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
LMBR1-201ENST00000353442 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
LMBR1-201ENST00000353442 NRDCO43847 1150 aa17.27■□□□□ 0.35
LMBR1-201ENST00000353442 TAF7LQ5H9L4 462 aa17.25■□□□□ 0.35
LMBR1-201ENST00000353442 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
LMBR1-201ENST00000353442 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
LMBR1-201ENST00000353442 A0A0U1RQG5 324 aaPredicted RBP17.23■□□□□ 0.35
LMBR1-201ENST00000353442 ARID3AQ99856 593 aa17.23■□□□□ 0.35
LMBR1-201ENST00000353442 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
LMBR1-201ENST00000353442 RAD21O60216 631 aa17.22■□□□□ 0.35
LMBR1-201ENST00000353442 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms