RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 KIF21BO75037 1637 aa10.19□□□□□ -0.78
ATR-201ENST00000350721 TMC1Q8TDI8 760 aa10.17□□□□□ -0.78
ATR-201ENST00000350721 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
ATR-201ENST00000350721 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
ATR-201ENST00000350721 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
ATR-201ENST00000350721 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
ATR-201ENST00000350721 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.79
ATR-201ENST00000350721 NOP58Q9Y2X3 529 aaKnown RBP10.14□□□□□ -0.79
ATR-201ENST00000350721 FANCIQ9NVI1 1328 aa10.14□□□□□ -0.79
ATR-201ENST00000350721 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
ATR-201ENST00000350721 RAB3GAP2Q9H2M9 1393 aa10.12□□□□□ -0.79
ATR-201ENST00000350721 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
ATR-201ENST00000350721 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
ATR-201ENST00000350721 PPP1R15AO75807 674 aaPredicted RBP10.09□□□□□ -0.79
ATR-201ENST00000350721 NBR1Q14596 966 aa10.08□□□□□ -0.8
ATR-201ENST00000350721 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
ATR-201ENST00000350721 RAPGEF2Q9Y4G8 1499 aa10.08□□□□□ -0.8
ATR-201ENST00000350721 USP35Q9P2H5 1018 aa10.08□□□□□ -0.8
ATR-201ENST00000350721 ZNF326Q5BKZ1 582 aaKnown RBP10.07□□□□□ -0.8
ATR-201ENST00000350721 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
ATR-201ENST00000350721 CNGB1Q14028 1251 aaPredicted RBP10.07□□□□□ -0.8
ATR-201ENST00000350721 ANP32BQ92688 251 aaKnown RBP10.05□□□□□ -0.8
ATR-201ENST00000350721 NPM2Q86SE8 214 aaKnown RBP10.05□□□□□ -0.8
ATR-201ENST00000350721 CARMIL1Q5VZK9 1371 aa10.04□□□□□ -0.8
ATR-201ENST00000350721 BECN1Q14457 450 aa10.04□□□□□ -0.8
ATR-201ENST00000350721 ARID4BQ4LE39 1312 aaPredicted RBP10.03□□□□□ -0.8
ATR-201ENST00000350721 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
ATR-201ENST00000350721 EIF5BO60841 1220 aaKnown RBP10.03□□□□□ -0.8
ATR-201ENST00000350721 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
ATR-201ENST00000350721 SIN3AQ96ST3 1273 aa10.02□□□□□ -0.8
ATR-201ENST00000350721 DEKP35659 375 aaKnown RBP10.02□□□□□ -0.81
ATR-201ENST00000350721 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
ATR-201ENST00000350721 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
ATR-201ENST00000350721 SLC4A1APQ9BWU0 796 aaKnown RBP10.01□□□□□ -0.81
ATR-201ENST00000350721 TCERG1O14776 1098 aaKnown RBP10.01□□□□□ -0.81
ATR-201ENST00000350721 NEFMP07197 916 aa10□□□□□ -0.81
ATR-201ENST00000350721 IRX6P78412 446 aaPredicted RBP10□□□□□ -0.81
ATR-201ENST00000350721 ROCK2O75116 1388 aaKnown RBP10□□□□□ -0.81
ATR-201ENST00000350721 ZBED9Q6R2W3 1325 aa10□□□□□ -0.81
ATR-201ENST00000350721 CUX2O14529 1486 aa9.99□□□□□ -0.81
ATR-201ENST00000350721 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
ATR-201ENST00000350721 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
ATR-201ENST00000350721 TSPY4P0CV99 314 aa9.98□□□□□ -0.81
ATR-201ENST00000350721 TSPY10P0CW01 314 aa9.98□□□□□ -0.81
ATR-201ENST00000350721 CDCA8Q53HL2 280 aa9.98□□□□□ -0.81
ATR-201ENST00000350721 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
ATR-201ENST00000350721 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
ATR-201ENST00000350721 PDE3BQ13370 1112 aa9.96□□□□□ -0.81
ATR-201ENST00000350721 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.82
ATR-201ENST00000350721 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
ATR-201ENST00000350721 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
ATR-201ENST00000350721 PHLDB1Q86UU1 1377 aa9.94□□□□□ -0.82
ATR-201ENST00000350721 RRP7BPQ9NSQ0 103 aa9.94□□□□□ -0.82
ATR-201ENST00000350721 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
ATR-201ENST00000350721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATR-201ENST00000350721 NUDCQ9Y266 331 aa9.93□□□□□ -0.82
ATR-201ENST00000350721 RALBP1Q15311 655 aa9.93□□□□□ -0.82
ATR-201ENST00000350721 UACAQ9BZF9 1416 aa9.92□□□□□ -0.82
ATR-201ENST00000350721 TOP2BQ02880 1626 aa9.91□□□□□ -0.82
ATR-201ENST00000350721 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
ATR-201ENST00000350721 HSP90AA1P07900 732 aaKnown RBP9.91□□□□□ -0.82
ATR-201ENST00000350721 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
ATR-201ENST00000350721 CUX1P39880 1505 aa9.91□□□□□ -0.82
ATR-201ENST00000350721 MS4A1P11836 297 aa9.91□□□□□ -0.82
ATR-201ENST00000350721 HSPA5P11021 654 aaKnown RBP9.9□□□□□ -0.82
ATR-201ENST00000350721 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
ATR-201ENST00000350721 PRKRIP1Q9H875 184 aaPredicted RBP9.89□□□□□ -0.83
ATR-201ENST00000350721 LRRC9Q6ZRR7 1453 aa9.89□□□□□ -0.83
ATR-201ENST00000350721 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
ATR-201ENST00000350721 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
ATR-201ENST00000350721 CARD11Q9BXL7 1154 aa9.88□□□□□ -0.83
ATR-201ENST00000350721 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
ATR-201ENST00000350721 TRIM44Q96DX7 344 aaPredicted RBP9.87□□□□□ -0.83
ATR-201ENST00000350721 GOLGA6L22H0YM25 854 aa9.86□□□□□ -0.83
ATR-201ENST00000350721 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
ATR-201ENST00000350721 NLRP13Q86W25 1043 aa9.86□□□□□ -0.83
ATR-201ENST00000350721 RCAN3Q9UKA8 241 aa9.86□□□□□ -0.83
ATR-201ENST00000350721 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
ATR-201ENST00000350721 ARAP1Q96P48 1450 aa9.85□□□□□ -0.83
ATR-201ENST00000350721 MPHOSPH9Q99550 1183 aa9.85□□□□□ -0.83
ATR-201ENST00000350721 FYCO1Q9BQS8 1478 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 FGD6Q6ZV73 1430 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
ATR-201ENST00000350721 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
ATR-201ENST00000350721 CHMP4BQ9H444 224 aaKnown RBP9.83□□□□□ -0.84
ATR-201ENST00000350721 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
ATR-201ENST00000350721 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
ATR-201ENST00000350721 KIF15Q9NS87 1388 aa9.82□□□□□ -0.84
ATR-201ENST00000350721 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
ATR-201ENST00000350721 PLEKHD1A6NEE1 506 aa9.82□□□□□ -0.84
ATR-201ENST00000350721 EIF4G1Q04637 1599 aaKnown RBP9.81□□□□□ -0.84
ATR-201ENST00000350721 HFM1A2PYH4 1435 aa9.81□□□□□ -0.84
ATR-201ENST00000350721 PTMSP20962 102 aa9.81□□□□□ -0.84
ATR-201ENST00000350721 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
ATR-201ENST00000350721 CADPSQ9ULU8 1353 aa9.81□□□□□ -0.84
ATR-201ENST00000350721 MYOM3Q5VTT5 1437 aa9.81□□□□□ -0.84
ATR-201ENST00000350721 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms