RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
PDAP1-201ENST00000350498 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
PDAP1-201ENST00000350498 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
PDAP1-201ENST00000350498 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
PDAP1-201ENST00000350498 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
PDAP1-201ENST00000350498 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
PDAP1-201ENST00000350498 TIAM1Q13009 1591 aa24.47■■□□□ 1.51
PDAP1-201ENST00000350498 PHLDB1Q86UU1 1377 aa24.44■■□□□ 1.5
PDAP1-201ENST00000350498 PCF11O94913 1555 aaKnown RBP24.41■■□□□ 1.5
PDAP1-201ENST00000350498 LRRC9Q6ZRR7 1453 aa24.4■■□□□ 1.5
PDAP1-201ENST00000350498 FAM50AQ14320 339 aaKnown RBP24.39■■□□□ 1.5
PDAP1-201ENST00000350498 RAB3GAP2Q9H2M9 1393 aa24.34■■□□□ 1.49
PDAP1-201ENST00000350498 LAMC3Q9Y6N6 1575 aa24.34■■□□□ 1.49
PDAP1-201ENST00000350498 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
PDAP1-201ENST00000350498 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
PDAP1-201ENST00000350498 MAP3K1Q13233 1512 aa24.27■■□□□ 1.48
PDAP1-201ENST00000350498 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
PDAP1-201ENST00000350498 CLSPNQ9HAW4 1339 aa24.27■■□□□ 1.48
PDAP1-201ENST00000350498 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
PDAP1-201ENST00000350498 CUL7Q14999 1698 aa24.25■■□□□ 1.47
PDAP1-201ENST00000350498 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
PDAP1-201ENST00000350498 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
PDAP1-201ENST00000350498 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
PDAP1-201ENST00000350498 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
PDAP1-201ENST00000350498 SIN3AQ96ST3 1273 aa24.21■■□□□ 1.47
PDAP1-201ENST00000350498 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
PDAP1-201ENST00000350498 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
PDAP1-201ENST00000350498 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
PDAP1-201ENST00000350498 FYCO1Q9BQS8 1478 aa24.17■■□□□ 1.46
PDAP1-201ENST00000350498 EFCAB5A4FU69 1503 aa24.15■■□□□ 1.46
PDAP1-201ENST00000350498 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.451e-7■■■■■ 32.7
PDAP1-201ENST00000350498 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
PDAP1-201ENST00000350498 LRRIQ1Q96JM4 1722 aa24.11■■□□□ 1.45
PDAP1-201ENST00000350498 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
PDAP1-201ENST00000350498 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
PDAP1-201ENST00000350498 FMN1Q68DA7 1419 aa24.08■■□□□ 1.45
PDAP1-201ENST00000350498 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
PDAP1-201ENST00000350498 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
PDAP1-201ENST00000350498 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
PDAP1-201ENST00000350498 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
PDAP1-201ENST00000350498 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
PDAP1-201ENST00000350498 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
PDAP1-201ENST00000350498 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
PDAP1-201ENST00000350498 MAGI3Q5TCQ9 1506 aa23.95■■□□□ 1.43
PDAP1-201ENST00000350498 NCOA2Q15596 1464 aa23.95■■□□□ 1.42
PDAP1-201ENST00000350498 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
PDAP1-201ENST00000350498 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
PDAP1-201ENST00000350498 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
PDAP1-201ENST00000350498 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
PDAP1-201ENST00000350498 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
PDAP1-201ENST00000350498 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
PDAP1-201ENST00000350498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.412e-8■■■■□ 23.1
PDAP1-201ENST00000350498 CDK13Q14004 1512 aaKnown RBP23.85■■□□□ 1.41
PDAP1-201ENST00000350498 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
PDAP1-201ENST00000350498 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
PDAP1-201ENST00000350498 IQGAP2Q13576 1575 aa23.83■■□□□ 1.4
PDAP1-201ENST00000350498 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
PDAP1-201ENST00000350498 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
PDAP1-201ENST00000350498 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
PDAP1-201ENST00000350498 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
PDAP1-201ENST00000350498 NAIPQ13075 1403 aa23.79■■□□□ 1.4
PDAP1-201ENST00000350498 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
PDAP1-201ENST00000350498 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
PDAP1-201ENST00000350498 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
PDAP1-201ENST00000350498 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
PDAP1-201ENST00000350498 EPRSP07814 1512 aaKnown RBP23.76■■□□□ 1.39
PDAP1-201ENST00000350498 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
PDAP1-201ENST00000350498 ARHGEF11O15085 1522 aa23.72■■□□□ 1.39
PDAP1-201ENST00000350498 FBLN2P98095 1184 aa23.71■■□□□ 1.39
PDAP1-201ENST00000350498 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
PDAP1-201ENST00000350498 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
PDAP1-201ENST00000350498 HECW1Q76N89 1606 aa23.7■■□□□ 1.38
PDAP1-201ENST00000350498 KDM6BO15054 1643 aa23.68■■□□□ 1.38
PDAP1-201ENST00000350498 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
PDAP1-201ENST00000350498 WDR62O43379 1518 aa23.68■■□□□ 1.38
PDAP1-201ENST00000350498 FOXD1Q16676 465 aa23.68■■□□□ 1.38
PDAP1-201ENST00000350498 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
PDAP1-201ENST00000350498 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PDAP1-201ENST00000350498 DISP1Q96F81 1524 aa23.66■■□□□ 1.38
PDAP1-201ENST00000350498 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
PDAP1-201ENST00000350498 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
PDAP1-201ENST00000350498 DENND4BO75064 1496 aaPredicted RBP23.61■■□□□ 1.37
PDAP1-201ENST00000350498 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
PDAP1-201ENST00000350498 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
PDAP1-201ENST00000350498 KIAA0586Q9BVV6 1533 aa23.6■■□□□ 1.37
PDAP1-201ENST00000350498 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
PDAP1-201ENST00000350498 TCOF1Q13428 1488 aaKnown RBP23.59■■□□□ 1.37
PDAP1-201ENST00000350498 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
PDAP1-201ENST00000350498 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.37
PDAP1-201ENST00000350498 BCANQ96GW7 911 aa23.56■■□□□ 1.36
PDAP1-201ENST00000350498 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
PDAP1-201ENST00000350498 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
PDAP1-201ENST00000350498 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
PDAP1-201ENST00000350498 MPHOSPH9Q99550 1183 aa23.52■■□□□ 1.35
PDAP1-201ENST00000350498 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
PDAP1-201ENST00000350498 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
PDAP1-201ENST00000350498 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
PDAP1-201ENST00000350498 RAPGEF6Q8TEU7 1601 aa23.47■■□□□ 1.35
PDAP1-201ENST00000350498 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
PDAP1-201ENST00000350498 TSHZ2Q9NRE2 1034 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms