RNA–Protein interactions for RNA: ENST00000347529.7

EPB41-202, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-202ENST00000347529 ANP32CO43423 234 aa12.25□□□□□ -0.45
EPB41-202ENST00000347529 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
EPB41-202ENST00000347529 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
EPB41-202ENST00000347529 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
EPB41-202ENST00000347529 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
EPB41-202ENST00000347529 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
EPB41-202ENST00000347529 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
EPB41-202ENST00000347529 TIAM1Q13009 1591 aa12.2□□□□□ -0.46
EPB41-202ENST00000347529 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
EPB41-202ENST00000347529 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
EPB41-202ENST00000347529 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
EPB41-202ENST00000347529 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
EPB41-202ENST00000347529 MSH5O43196 834 aa12.17□□□□□ -0.46
EPB41-202ENST00000347529 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
EPB41-202ENST00000347529 ERICH6BQ5W0A0 696 aa12.13□□□□□ -0.47
EPB41-202ENST00000347529 CUX1P39880 1505 aa12.13□□□□□ -0.47
EPB41-202ENST00000347529 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
EPB41-202ENST00000347529 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
EPB41-202ENST00000347529 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
EPB41-202ENST00000347529 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
EPB41-202ENST00000347529 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
EPB41-202ENST00000347529 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
EPB41-202ENST00000347529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.07□□□□□ -0.485e-11■□□□□ 10.7
EPB41-202ENST00000347529 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.485e-9■□□□□ 10.1
EPB41-202ENST00000347529 PPP4R2Q9NY27 417 aa12.04□□□□□ -0.48
EPB41-202ENST00000347529 HMGXB3Q12766 1538 aa12.02□□□□□ -0.49
EPB41-202ENST00000347529 IGF1RP08069 1367 aa12.02□□□□□ -0.49
EPB41-202ENST00000347529 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
EPB41-202ENST00000347529 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
EPB41-202ENST00000347529 CFTRP13569 1480 aa11.99□□□□□ -0.49
EPB41-202ENST00000347529 CARMIL1Q5VZK9 1371 aa11.99□□□□□ -0.49
EPB41-202ENST00000347529 UACAQ9BZF9 1416 aa11.99□□□□□ -0.49
EPB41-202ENST00000347529 CCDC18Q5T9S5 1454 aa11.98□□□□□ -0.49
EPB41-202ENST00000347529 DEKP35659 375 aaKnown RBP11.97□□□□□ -0.49
EPB41-202ENST00000347529 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
EPB41-202ENST00000347529 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
EPB41-202ENST00000347529 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
EPB41-202ENST00000347529 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
EPB41-202ENST00000347529 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
EPB41-202ENST00000347529 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
EPB41-202ENST00000347529 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■■■■■ 38.9
EPB41-202ENST00000347529 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
EPB41-202ENST00000347529 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
EPB41-202ENST00000347529 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
EPB41-202ENST00000347529 EFCAB5A4FU69 1503 aa11.93□□□□□ -0.5
EPB41-202ENST00000347529 NOP58Q9Y2X3 529 aaKnown RBP11.93□□□□□ -0.5
EPB41-202ENST00000347529 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
EPB41-202ENST00000347529 NCOA2Q15596 1464 aa11.91□□□□□ -0.5
EPB41-202ENST00000347529 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
EPB41-202ENST00000347529 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
EPB41-202ENST00000347529 KDM5BQ9UGL1 1544 aa11.9□□□□□ -0.5
EPB41-202ENST00000347529 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
EPB41-202ENST00000347529 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
EPB41-202ENST00000347529 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.514e-7■■□□□ 13.3
EPB41-202ENST00000347529 P3H3Q8IVL6 736 aa11.89□□□□□ -0.51
EPB41-202ENST00000347529 FHOD3Q2V2M9 1422 aa11.88□□□□□ -0.51
EPB41-202ENST00000347529 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
EPB41-202ENST00000347529 NAIPQ13075 1403 aa11.88□□□□□ -0.51
EPB41-202ENST00000347529 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
EPB41-202ENST00000347529 FAM9BQ8IZU0 186 aa11.86□□□□□ -0.51
EPB41-202ENST00000347529 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
EPB41-202ENST00000347529 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
EPB41-202ENST00000347529 MRS2Q9HD23 443 aa11.85□□□□□ -0.51
EPB41-202ENST00000347529 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
EPB41-202ENST00000347529 NBR1Q14596 966 aa11.84□□□□□ -0.51
EPB41-202ENST00000347529 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.51
EPB41-202ENST00000347529 CCDC184Q52MB2 194 aa11.83□□□□□ -0.51
EPB41-202ENST00000347529 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.51
EPB41-202ENST00000347529 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
EPB41-202ENST00000347529 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
EPB41-202ENST00000347529 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
EPB41-202ENST00000347529 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
EPB41-202ENST00000347529 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
EPB41-202ENST00000347529 SUPT6HQ7KZ85 1726 aaKnown RBP11.81□□□□□ -0.52
EPB41-202ENST00000347529 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
EPB41-202ENST00000347529 POLR1AO95602 1720 aaPredicted RBP11.81□□□□□ -0.52
EPB41-202ENST00000347529 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
EPB41-202ENST00000347529 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
EPB41-202ENST00000347529 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
EPB41-202ENST00000347529 CC2D2AQ9P2K1 1620 aa11.8□□□□□ -0.52
EPB41-202ENST00000347529 GCC2Q8IWJ2 1684 aa11.8□□□□□ -0.52
EPB41-202ENST00000347529 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
EPB41-202ENST00000347529 CUL7Q14999 1698 aa11.8□□□□□ -0.52
EPB41-202ENST00000347529 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
EPB41-202ENST00000347529 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
EPB41-202ENST00000347529 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
EPB41-202ENST00000347529 THOC2Q8NI27 1593 aaKnown RBP11.78□□□□□ -0.52
EPB41-202ENST00000347529 EHBP1L1Q8N3D4 1523 aa11.77□□□□□ -0.53
EPB41-202ENST00000347529 AKNAQ7Z591 1439 aa11.77□□□□□ -0.53
EPB41-202ENST00000347529 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
EPB41-202ENST00000347529 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
EPB41-202ENST00000347529 LRRIQ1Q96JM4 1722 aa11.75□□□□□ -0.53
EPB41-202ENST00000347529 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
EPB41-202ENST00000347529 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
EPB41-202ENST00000347529 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
EPB41-202ENST00000347529 DENND4BO75064 1496 aaPredicted RBP11.74□□□□□ -0.53
EPB41-202ENST00000347529 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
EPB41-202ENST00000347529 RRP7BPQ9NSQ0 103 aa11.73□□□□□ -0.53
EPB41-202ENST00000347529 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
EPB41-202ENST00000347529 GRIN2BQ13224 1484 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms