RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.32
AC008543.1-201ENST00000344893 BCANQ96GW7 911 aa13.02□□□□□ -0.33
AC008543.1-201ENST00000344893 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
AC008543.1-201ENST00000344893 IGF1RP08069 1367 aa13.01□□□□□ -0.33
AC008543.1-201ENST00000344893 ITGAEP38570 1179 aa13.01□□□□□ -0.33
AC008543.1-201ENST00000344893 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
AC008543.1-201ENST00000344893 CLIP1P30622 1438 aa12.99□□□□□ -0.33
AC008543.1-201ENST00000344893 EEA1Q15075 1411 aa12.99□□□□□ -0.33
AC008543.1-201ENST00000344893 ZNF608Q9ULD9 1512 aaPredicted RBP12.97□□□□□ -0.33
AC008543.1-201ENST00000344893 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
AC008543.1-201ENST00000344893 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
AC008543.1-201ENST00000344893 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
AC008543.1-201ENST00000344893 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
AC008543.1-201ENST00000344893 MSH5O43196 834 aa12.94□□□□□ -0.34
AC008543.1-201ENST00000344893 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
AC008543.1-201ENST00000344893 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
AC008543.1-201ENST00000344893 FKBP8Q14318 412 aa12.9□□□□□ -0.34
AC008543.1-201ENST00000344893 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
AC008543.1-201ENST00000344893 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
AC008543.1-201ENST00000344893 DEKP35659 375 aaKnown RBP12.83□□□□□ -0.36
AC008543.1-201ENST00000344893 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
AC008543.1-201ENST00000344893 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
AC008543.1-201ENST00000344893 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
AC008543.1-201ENST00000344893 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
AC008543.1-201ENST00000344893 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
AC008543.1-201ENST00000344893 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
AC008543.1-201ENST00000344893 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
AC008543.1-201ENST00000344893 KCNH8Q96L42 1107 aa12.77□□□□□ -0.36
AC008543.1-201ENST00000344893 NEFLP07196 543 aa12.77□□□□□ -0.37
AC008543.1-201ENST00000344893 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.37
AC008543.1-201ENST00000344893 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
AC008543.1-201ENST00000344893 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
AC008543.1-201ENST00000344893 KIF21BO75037 1637 aa12.75□□□□□ -0.37
AC008543.1-201ENST00000344893 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
AC008543.1-201ENST00000344893 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
AC008543.1-201ENST00000344893 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
AC008543.1-201ENST00000344893 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
AC008543.1-201ENST00000344893 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
AC008543.1-201ENST00000344893 WDR62O43379 1518 aa12.7□□□□□ -0.38
AC008543.1-201ENST00000344893 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
AC008543.1-201ENST00000344893 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
AC008543.1-201ENST00000344893 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
AC008543.1-201ENST00000344893 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
AC008543.1-201ENST00000344893 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
AC008543.1-201ENST00000344893 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
AC008543.1-201ENST00000344893 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
AC008543.1-201ENST00000344893 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
AC008543.1-201ENST00000344893 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
AC008543.1-201ENST00000344893 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
AC008543.1-201ENST00000344893 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
AC008543.1-201ENST00000344893 ABCA5Q8WWZ7 1642 aa12.61□□□□□ -0.39
AC008543.1-201ENST00000344893 NBR1Q14596 966 aa12.61□□□□□ -0.39
AC008543.1-201ENST00000344893 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
AC008543.1-201ENST00000344893 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
AC008543.1-201ENST00000344893 TRIM52Q96A61 297 aa12.57□□□□□ -0.4
AC008543.1-201ENST00000344893 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
AC008543.1-201ENST00000344893 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
AC008543.1-201ENST00000344893 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
AC008543.1-201ENST00000344893 SYNJ2O15056 1496 aa12.55□□□□□ -0.4
AC008543.1-201ENST00000344893 CUL7Q14999 1698 aa12.55□□□□□ -0.4
AC008543.1-201ENST00000344893 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
AC008543.1-201ENST00000344893 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
AC008543.1-201ENST00000344893 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
AC008543.1-201ENST00000344893 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
AC008543.1-201ENST00000344893 OSCARQ8IYS5 282 aa12.52□□□□□ -0.4
AC008543.1-201ENST00000344893 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
AC008543.1-201ENST00000344893 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
AC008543.1-201ENST00000344893 NOP58Q9Y2X3 529 aaKnown RBP12.51□□□□□ -0.41
AC008543.1-201ENST00000344893 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
AC008543.1-201ENST00000344893 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
AC008543.1-201ENST00000344893 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
AC008543.1-201ENST00000344893 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
AC008543.1-201ENST00000344893 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 CDK13Q14004 1512 aaKnown RBP12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
AC008543.1-201ENST00000344893 PTPRGP23470 1445 aa12.48□□□□□ -0.41
AC008543.1-201ENST00000344893 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
AC008543.1-201ENST00000344893 ZNF644Q9H582 1327 aaPredicted RBP12.48□□□□□ -0.41
AC008543.1-201ENST00000344893 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
AC008543.1-201ENST00000344893 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
AC008543.1-201ENST00000344893 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
AC008543.1-201ENST00000344893 CEP170Q5SW79 1584 aa12.46□□□□□ -0.41
AC008543.1-201ENST00000344893 CCNB3Q8WWL7 1395 aa12.44□□□□□ -0.42
AC008543.1-201ENST00000344893 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
AC008543.1-201ENST00000344893 CFDP1Q9UEE9 299 aaPredicted RBP12.43□□□□□ -0.42
AC008543.1-201ENST00000344893 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
AC008543.1-201ENST00000344893 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC008543.1-201ENST00000344893 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
AC008543.1-201ENST00000344893 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
AC008543.1-201ENST00000344893 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
AC008543.1-201ENST00000344893 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
AC008543.1-201ENST00000344893 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
AC008543.1-201ENST00000344893 CHD1O14646 1710 aa12.38□□□□□ -0.43
AC008543.1-201ENST00000344893 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
AC008543.1-201ENST00000344893 HNRNPMP52272 730 aaKnown RBP eCLIP12.37□□□□□ -0.43
AC008543.1-201ENST00000344893 ANP32CO43423 234 aa12.36□□□□□ -0.43
AC008543.1-201ENST00000344893 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms