RNA–Protein interactions for RNA: ENST00000341462.8

FGFR1-203, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 6,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-203ENST00000341462 NBR1Q14596 966 aa24.97■■□□□ 1.59
FGFR1-203ENST00000341462 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.95■■□□□ 1.58
FGFR1-203ENST00000341462 ANP32BQ92688 251 aaKnown RBP24.94■■□□□ 1.58
FGFR1-203ENST00000341462 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
FGFR1-203ENST00000341462 MRS2Q9HD23 443 aa24.92■■□□□ 1.58
FGFR1-203ENST00000341462 CCDC136Q96JN2 1154 aa24.91■■□□□ 1.58
FGFR1-203ENST00000341462 EIF5BO60841 1220 aaKnown RBP24.91■■□□□ 1.58
FGFR1-203ENST00000341462 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
FGFR1-203ENST00000341462 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
FGFR1-203ENST00000341462 LMOD2Q6P5Q4 547 aa24.85■■□□□ 1.57
FGFR1-203ENST00000341462 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
FGFR1-203ENST00000341462 MYH16Q9H6N6 1097 aa24.84■■□□□ 1.57
FGFR1-203ENST00000341462 MIER1Q8N108 512 aa24.84■■□□□ 1.57
FGFR1-203ENST00000341462 PPM1GO15355 546 aaPredicted RBP24.82■■□□□ 1.56
FGFR1-203ENST00000341462 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
FGFR1-203ENST00000341462 CFDP1Q9UEE9 299 aaPredicted RBP24.74■■□□□ 1.55
FGFR1-203ENST00000341462 CLIP1P30622 1438 aa24.74■■□□□ 1.55
FGFR1-203ENST00000341462 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
FGFR1-203ENST00000341462 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
FGFR1-203ENST00000341462 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
FGFR1-203ENST00000341462 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
FGFR1-203ENST00000341462 POGKQ9P215 609 aa24.64■■□□□ 1.54
FGFR1-203ENST00000341462 NPHP1O15259 732 aa24.64■■□□□ 1.53
FGFR1-203ENST00000341462 MLECQ14165 292 aa24.64■■□□□ 1.53
FGFR1-203ENST00000341462 CDK11BP21127 795 aaKnown RBP24.63■■□□□ 1.53
FGFR1-203ENST00000341462 CFAP53Q96M91 514 aa24.63■■□□□ 1.53
FGFR1-203ENST00000341462 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.52
FGFR1-203ENST00000341462 LAS1LQ9Y4W2 734 aaKnown RBP24.57■■□□□ 1.52
FGFR1-203ENST00000341462 TPRNQ4KMQ1 711 aa24.55■■□□□ 1.52
FGFR1-203ENST00000341462 NEUROD2Q15784 382 aa24.55■■□□□ 1.52
FGFR1-203ENST00000341462 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
FGFR1-203ENST00000341462 CDCA8Q53HL2 280 aa24.53■■□□□ 1.52
FGFR1-203ENST00000341462 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
FGFR1-203ENST00000341462 CARD11Q9BXL7 1154 aa24.52■■□□□ 1.52
FGFR1-203ENST00000341462 TNNT2P45379 298 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-203ENST00000341462 TULP1O00294 542 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-203ENST00000341462 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
FGFR1-203ENST00000341462 MAPK8IP3Q9UPT6 1336 aa24.46■■□□□ 1.51
FGFR1-203ENST00000341462 SOX12O15370 315 aa24.44■■□□□ 1.5
FGFR1-203ENST00000341462 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
FGFR1-203ENST00000341462 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
FGFR1-203ENST00000341462 FTSJ3Q8IY81 847 aaKnown RBP24.4■■□□□ 1.5
FGFR1-203ENST00000341462 SIN3AQ96ST3 1273 aa24.4■■□□□ 1.5
FGFR1-203ENST00000341462 TAOK2Q9UL54 1235 aa24.4■■□□□ 1.5
FGFR1-203ENST00000341462 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
FGFR1-203ENST00000341462 CCDC180Q9P1Z9 1646 aa24.37■■□□□ 1.49
FGFR1-203ENST00000341462 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
FGFR1-203ENST00000341462 U2SURPO15042 1029 aaKnown RBP24.36■■□□□ 1.49
FGFR1-203ENST00000341462 CC2D1BQ5T0F9 858 aaKnown RBP24.36■■□□□ 1.49
FGFR1-203ENST00000341462 NCLP19338 710 aaKnown RBP24.35■■□□□ 1.49
FGFR1-203ENST00000341462 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.49
FGFR1-203ENST00000341462 HDGFP51858 240 aaKnown RBP24.31■■□□□ 1.48
FGFR1-203ENST00000341462 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
FGFR1-203ENST00000341462 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
FGFR1-203ENST00000341462 GGT6Q6P531 493 aa24.3■■□□□ 1.48
FGFR1-203ENST00000341462 CASC1Q6TDU7 716 aa24.29■■□□□ 1.48
FGFR1-203ENST00000341462 OS9Q13438 667 aaPredicted RBP24.29■■□□□ 1.48
FGFR1-203ENST00000341462 SRPK2P78362 688 aaKnown RBP24.27■■□□□ 1.48
FGFR1-203ENST00000341462 KANK1Q14678 1352 aa24.27■■□□□ 1.48
FGFR1-203ENST00000341462 FRAT1Q92837 279 aaPredicted RBP24.26■■□□□ 1.47
FGFR1-203ENST00000341462 EEA1Q15075 1411 aa24.26■■□□□ 1.47
FGFR1-203ENST00000341462 GOLGA2Q08379 1002 aa24.26■■□□□ 1.47
FGFR1-203ENST00000341462 BECN1Q14457 450 aa24.26■■□□□ 1.47
FGFR1-203ENST00000341462 ZRSR1Q15695 479 aaKnown RBP24.25■■□□□ 1.47
FGFR1-203ENST00000341462 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
FGFR1-203ENST00000341462 DDRGK1Q96HY6 314 aa24.22■■□□□ 1.47
FGFR1-203ENST00000341462 RGS3P49796 1198 aa24.22■■□□□ 1.47
FGFR1-203ENST00000341462 STK26Q9P289 416 aa24.21■■□□□ 1.47
FGFR1-203ENST00000341462 GOLGA6L22H0YM25 854 aa24.18■■□□□ 1.46
FGFR1-203ENST00000341462 PAK3O75914 559 aaPredicted RBP24.16■■□□□ 1.46
FGFR1-203ENST00000341462 FGD1P98174 961 aa24.15■■□□□ 1.46
FGFR1-203ENST00000341462 NAP1L2Q9ULW6 460 aaPredicted RBP24.15■■□□□ 1.46
FGFR1-203ENST00000341462 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
FGFR1-203ENST00000341462 NACADO15069 1562 aa24.13■■□□□ 1.45
FGFR1-203ENST00000341462 TMF1P82094 1093 aa24.13■■□□□ 1.45
FGFR1-203ENST00000341462 TRIM44Q96DX7 344 aaPredicted RBP24.13■■□□□ 1.45
FGFR1-203ENST00000341462 PNNQ9H307 717 aaKnown RBP24.11■■□□□ 1.45
FGFR1-203ENST00000341462 KCNJ4P48050 445 aa24.11■■□□□ 1.45
FGFR1-203ENST00000341462 CSB-PGBD3P0DP91 1061 aa24.09■■□□□ 1.45
FGFR1-203ENST00000341462 GLIPR1L2Q4G1C9 344 aa24.09■■□□□ 1.45
FGFR1-203ENST00000341462 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
FGFR1-203ENST00000341462 CARMIL1Q5VZK9 1371 aa24.07■■□□□ 1.44
FGFR1-203ENST00000341462 CCDC9Q9Y3X0 531 aaKnown RBP24.07■■□□□ 1.44
FGFR1-203ENST00000341462 CUX2O14529 1486 aa24.07■■□□□ 1.44
FGFR1-203ENST00000341462 ZNF330Q9Y3S2 320 aaPredicted RBP24.07■■□□□ 1.44
FGFR1-203ENST00000341462 PTMAP06454 111 aaKnown RBP24.06■■□□□ 1.44
FGFR1-203ENST00000341462 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
FGFR1-203ENST00000341462 ISY1Q9ULR0 285 aaKnown RBP24.06■■□□□ 1.44
FGFR1-203ENST00000341462 B4GALNT3Q6L9W6 998 aa24.05■■□□□ 1.44
FGFR1-203ENST00000341462 FOXD1Q16676 465 aa24.04■■□□□ 1.44
FGFR1-203ENST00000341462 RTF1Q92541 710 aaKnown RBP24.04■■□□□ 1.44
FGFR1-203ENST00000341462 RTN4Q9NQC3 1192 aaKnown RBP24.02■■□□□ 1.44
FGFR1-203ENST00000341462 CHMP4BQ9H444 224 aaKnown RBP24.01■■□□□ 1.43
FGFR1-203ENST00000341462 PLCB2Q00722 1185 aa24■■□□□ 1.43
FGFR1-203ENST00000341462 HDGFL2Q7Z4V5 671 aaPredicted RBP23.98■■□□□ 1.43
FGFR1-203ENST00000341462 SPRYD3Q8NCJ5 442 aa23.98■■□□□ 1.43
FGFR1-203ENST00000341462 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
FGFR1-203ENST00000341462 SOGA1O94964 1423 aa23.97■■□□□ 1.43
FGFR1-203ENST00000341462 MS4A1P11836 297 aa23.96■■□□□ 1.43
FGFR1-203ENST00000341462 DNTTIP2Q5QJE6 756 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms