RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
TNFSF13-201ENST00000338784 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
TNFSF13-201ENST00000338784 CENPBP07199 599 aaPredicted RBP22.27■■□□□ 1.15
TNFSF13-201ENST00000338784 CCNB3Q8WWL7 1395 aa22.26■■□□□ 1.15
TNFSF13-201ENST00000338784 NEUROD1Q13562 356 aa22.25■■□□□ 1.15
TNFSF13-201ENST00000338784 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
TNFSF13-201ENST00000338784 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
TNFSF13-201ENST00000338784 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
TNFSF13-201ENST00000338784 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
TNFSF13-201ENST00000338784 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
TNFSF13-201ENST00000338784 CUL7Q14999 1698 aa22.17■■□□□ 1.14
TNFSF13-201ENST00000338784 ABCA5Q8WWZ7 1642 aa22.14■■□□□ 1.13
TNFSF13-201ENST00000338784 WDR62O43379 1518 aa22.13■■□□□ 1.13
TNFSF13-201ENST00000338784 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
TNFSF13-201ENST00000338784 ITGAEP38570 1179 aa22.09■■□□□ 1.13
TNFSF13-201ENST00000338784 MIER1Q8N108 512 aa22.08■■□□□ 1.12
TNFSF13-201ENST00000338784 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
TNFSF13-201ENST00000338784 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
TNFSF13-201ENST00000338784 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
TNFSF13-201ENST00000338784 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
TNFSF13-201ENST00000338784 PCF11O94913 1555 aaKnown RBP22.03■■□□□ 1.12
TNFSF13-201ENST00000338784 FHOD3Q2V2M9 1422 aa22.02■■□□□ 1.12
TNFSF13-201ENST00000338784 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
TNFSF13-201ENST00000338784 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
TNFSF13-201ENST00000338784 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
TNFSF13-201ENST00000338784 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
TNFSF13-201ENST00000338784 FYCO1Q9BQS8 1478 aa22■■□□□ 1.11
TNFSF13-201ENST00000338784 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
TNFSF13-201ENST00000338784 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
TNFSF13-201ENST00000338784 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
TNFSF13-201ENST00000338784 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
TNFSF13-201ENST00000338784 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
TNFSF13-201ENST00000338784 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
TNFSF13-201ENST00000338784 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
TNFSF13-201ENST00000338784 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
TNFSF13-201ENST00000338784 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
TNFSF13-201ENST00000338784 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
TNFSF13-201ENST00000338784 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
TNFSF13-201ENST00000338784 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
TNFSF13-201ENST00000338784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
TNFSF13-201ENST00000338784 IFT140Q96RY7 1462 aa21.87■■□□□ 1.09
TNFSF13-201ENST00000338784 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
TNFSF13-201ENST00000338784 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
TNFSF13-201ENST00000338784 SAMD9Q5K651 1589 aa21.81■■□□□ 1.08
TNFSF13-201ENST00000338784 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
TNFSF13-201ENST00000338784 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
TNFSF13-201ENST00000338784 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
TNFSF13-201ENST00000338784 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
TNFSF13-201ENST00000338784 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
TNFSF13-201ENST00000338784 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
TNFSF13-201ENST00000338784 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.07
TNFSF13-201ENST00000338784 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
TNFSF13-201ENST00000338784 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
TNFSF13-201ENST00000338784 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
TNFSF13-201ENST00000338784 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
TNFSF13-201ENST00000338784 IQGAP2Q13576 1575 aa21.64■■□□□ 1.05
TNFSF13-201ENST00000338784 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
TNFSF13-201ENST00000338784 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
TNFSF13-201ENST00000338784 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
TNFSF13-201ENST00000338784 CCDC18Q5T9S5 1454 aa21.61■■□□□ 1.05
TNFSF13-201ENST00000338784 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
TNFSF13-201ENST00000338784 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
TNFSF13-201ENST00000338784 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
TNFSF13-201ENST00000338784 UACAQ9BZF9 1416 aa21.56■■□□□ 1.04
TNFSF13-201ENST00000338784 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
TNFSF13-201ENST00000338784 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
TNFSF13-201ENST00000338784 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
TNFSF13-201ENST00000338784 NAIPQ13075 1403 aa21.54■■□□□ 1.04
TNFSF13-201ENST00000338784 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
TNFSF13-201ENST00000338784 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
TNFSF13-201ENST00000338784 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
TNFSF13-201ENST00000338784 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
TNFSF13-201ENST00000338784 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
TNFSF13-201ENST00000338784 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
TNFSF13-201ENST00000338784 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
TNFSF13-201ENST00000338784 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
TNFSF13-201ENST00000338784 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
TNFSF13-201ENST00000338784 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
TNFSF13-201ENST00000338784 TCOF1Q13428 1488 aaKnown RBP21.48■■□□□ 1.03
TNFSF13-201ENST00000338784 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
TNFSF13-201ENST00000338784 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
TNFSF13-201ENST00000338784 MIA2Q96PC5 1412 aa21.42■■□□□ 1.02
TNFSF13-201ENST00000338784 CDK13Q14004 1512 aaKnown RBP21.41■■□□□ 1.02
TNFSF13-201ENST00000338784 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
TNFSF13-201ENST00000338784 AKNAQ7Z591 1439 aa21.39■■□□□ 1.02
TNFSF13-201ENST00000338784 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.02
TNFSF13-201ENST00000338784 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
TNFSF13-201ENST00000338784 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
TNFSF13-201ENST00000338784 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
TNFSF13-201ENST00000338784 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
TNFSF13-201ENST00000338784 NUP160Q12769 1436 aa21.36■■□□□ 1.01
TNFSF13-201ENST00000338784 CHD1O14646 1710 aa21.35■■□□□ 1.01
TNFSF13-201ENST00000338784 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
TNFSF13-201ENST00000338784 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
TNFSF13-201ENST00000338784 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
TNFSF13-201ENST00000338784 FBLN2P98095 1184 aa21.31■■□□□ 1
TNFSF13-201ENST00000338784 TRIM52Q96A61 297 aa21.31■■□□□ 1
TNFSF13-201ENST00000338784 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
TNFSF13-201ENST00000338784 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
TNFSF13-201ENST00000338784 ANP32CO43423 234 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms