RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
SLC3A2-201ENST00000338663 EIF4G3O43432 1585 aaKnown RBP26.85■■□□□ 1.89
SLC3A2-201ENST00000338663 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
SLC3A2-201ENST00000338663 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
SLC3A2-201ENST00000338663 EFCAB5A4FU69 1503 aa26.72■■□□□ 1.87
SLC3A2-201ENST00000338663 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
SLC3A2-201ENST00000338663 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SLC3A2-201ENST00000338663 SAMD9Q5K651 1589 aa26.62■■□□□ 1.85
SLC3A2-201ENST00000338663 APLP2Q06481 763 aa26.59■■□□□ 1.85
SLC3A2-201ENST00000338663 IQGAP2Q13576 1575 aa26.57■■□□□ 1.84
SLC3A2-201ENST00000338663 TTBK1Q5TCY1 1321 aaPredicted RBP26.55■■□□□ 1.84
SLC3A2-201ENST00000338663 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
SLC3A2-201ENST00000338663 FHOD3Q2V2M9 1422 aa26.53■■□□□ 1.84
SLC3A2-201ENST00000338663 PCF11O94913 1555 aaKnown RBP26.52■■□□□ 1.84
SLC3A2-201ENST00000338663 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
SLC3A2-201ENST00000338663 PELP1Q8IZL8 1130 aaKnown RBP26.51■■□□□ 1.83
SLC3A2-201ENST00000338663 MAP3K1Q13233 1512 aa26.48■■□□□ 1.83
SLC3A2-201ENST00000338663 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
SLC3A2-201ENST00000338663 CFAP43Q8NDM7 1665 aa26.45■■□□□ 1.82
SLC3A2-201ENST00000338663 P3H3Q8IVL6 736 aa26.45■■□□□ 1.82
SLC3A2-201ENST00000338663 FYCO1Q9BQS8 1478 aa26.44■■□□□ 1.82
SLC3A2-201ENST00000338663 FMN1Q68DA7 1419 aa26.43■■□□□ 1.82
SLC3A2-201ENST00000338663 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
SLC3A2-201ENST00000338663 UGGT2Q9NYU1 1516 aa26.42■■□□□ 1.82
SLC3A2-201ENST00000338663 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
SLC3A2-201ENST00000338663 CASKIN1Q8WXD9 1431 aa26.4■■□□□ 1.82
SLC3A2-201ENST00000338663 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
SLC3A2-201ENST00000338663 KANK4Q5T7N3 995 aaPredicted RBP26.34■■□□□ 1.81
SLC3A2-201ENST00000338663 NUP160Q12769 1436 aa26.33■■□□□ 1.81
SLC3A2-201ENST00000338663 KIAA0556O60303 1618 aa26.31■■□□□ 1.8
SLC3A2-201ENST00000338663 LRRC9Q6ZRR7 1453 aa26.28■■□□□ 1.8
SLC3A2-201ENST00000338663 LRRIQ1Q96JM4 1722 aa26.28■■□□□ 1.8
SLC3A2-201ENST00000338663 CHD1O14646 1710 aa26.26■■□□□ 1.79
SLC3A2-201ENST00000338663 DISP1Q96F81 1524 aa26.26■■□□□ 1.79
SLC3A2-201ENST00000338663 FBLN2P98095 1184 aa26.24■■□□□ 1.79
SLC3A2-201ENST00000338663 HECW1Q76N89 1606 aa26.21■■□□□ 1.79
SLC3A2-201ENST00000338663 ATP1B4Q9UN42 357 aaPredicted RBP26.18■■□□□ 1.78
SLC3A2-201ENST00000338663 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
SLC3A2-201ENST00000338663 CCDC18Q5T9S5 1454 aa26.14■■□□□ 1.77
SLC3A2-201ENST00000338663 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.76
SLC3A2-201ENST00000338663 RAPGEF6Q8TEU7 1601 aa26.07■■□□□ 1.76
SLC3A2-201ENST00000338663 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
SLC3A2-201ENST00000338663 EPRSP07814 1512 aaKnown RBP26.05■■□□□ 1.76
SLC3A2-201ENST00000338663 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
SLC3A2-201ENST00000338663 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
SLC3A2-201ENST00000338663 PHLDB1Q86UU1 1377 aa26.03■■□□□ 1.76
SLC3A2-201ENST00000338663 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
SLC3A2-201ENST00000338663 SUPT6HQ7KZ85 1726 aaKnown RBP26.01■■□□□ 1.76
SLC3A2-201ENST00000338663 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
SLC3A2-201ENST00000338663 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
SLC3A2-201ENST00000338663 CDK13Q14004 1512 aaKnown RBP25.99■■□□□ 1.75
SLC3A2-201ENST00000338663 MAGI3Q5TCQ9 1506 aa25.99■■□□□ 1.75
SLC3A2-201ENST00000338663 NUP153P49790 1475 aaKnown RBP25.97■■□□□ 1.75
SLC3A2-201ENST00000338663 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SLC3A2-201ENST00000338663 NCOA2Q15596 1464 aa25.92■■□□□ 1.74
SLC3A2-201ENST00000338663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
SLC3A2-201ENST00000338663 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
SLC3A2-201ENST00000338663 PRG4Q92954 1404 aaPredicted RBP25.92■■□□□ 1.74
SLC3A2-201ENST00000338663 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
SLC3A2-201ENST00000338663 PLB1Q6P1J6 1458 aa25.9■■□□□ 1.74
SLC3A2-201ENST00000338663 ABCA8O94911 1581 aa25.89■■□□□ 1.74
SLC3A2-201ENST00000338663 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
SLC3A2-201ENST00000338663 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
SLC3A2-201ENST00000338663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.84■■□□□ 1.73
SLC3A2-201ENST00000338663 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
SLC3A2-201ENST00000338663 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
SLC3A2-201ENST00000338663 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
SLC3A2-201ENST00000338663 PTPRGP23470 1445 aa25.76■■□□□ 1.71
SLC3A2-201ENST00000338663 PTPN23Q9H3S7 1636 aa25.75■■□□□ 1.71
SLC3A2-201ENST00000338663 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
SLC3A2-201ENST00000338663 ADCY10Q96PN6 1610 aa25.75■■□□□ 1.71
SLC3A2-201ENST00000338663 CDK11AQ9UQ88 783 aaPredicted RBP25.73■■□□□ 1.71
SLC3A2-201ENST00000338663 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
SLC3A2-201ENST00000338663 ITGAEP38570 1179 aa25.71■■□□□ 1.71
SLC3A2-201ENST00000338663 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
SLC3A2-201ENST00000338663 TCOF1Q13428 1488 aaKnown RBP25.69■■□□□ 1.7
SLC3A2-201ENST00000338663 ATP10BO94823 1461 aa25.67■■□□□ 1.7
SLC3A2-201ENST00000338663 MIA2Q96PC5 1412 aa25.67■■□□□ 1.7
SLC3A2-201ENST00000338663 UACAQ9BZF9 1416 aa25.65■■□□□ 1.7
SLC3A2-201ENST00000338663 KIF14Q15058 1648 aa25.65■■□□□ 1.7
SLC3A2-201ENST00000338663 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.7
SLC3A2-201ENST00000338663 ABCC2Q92887 1545 aa25.62■■□□□ 1.69
SLC3A2-201ENST00000338663 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
SLC3A2-201ENST00000338663 SETD5Q9C0A6 1442 aa25.59■■□□□ 1.69
SLC3A2-201ENST00000338663 RAB3GAP2Q9H2M9 1393 aa25.57■■□□□ 1.68
SLC3A2-201ENST00000338663 DHX57Q6P158 1386 aaKnown RBP25.56■■□□□ 1.68
SLC3A2-201ENST00000338663 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
SLC3A2-201ENST00000338663 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
SLC3A2-201ENST00000338663 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
SLC3A2-201ENST00000338663 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
SLC3A2-201ENST00000338663 PLEKHD1A6NEE1 506 aa25.51■■□□□ 1.67
SLC3A2-201ENST00000338663 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
SLC3A2-201ENST00000338663 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
SLC3A2-201ENST00000338663 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
SLC3A2-201ENST00000338663 HFM1A2PYH4 1435 aa25.49■■□□□ 1.67
SLC3A2-201ENST00000338663 DNMT1P26358 1616 aaKnown RBP25.49■■□□□ 1.67
SLC3A2-201ENST00000338663 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
SLC3A2-201ENST00000338663 GCC2Q8IWJ2 1684 aa25.47■■□□□ 1.67
SLC3A2-201ENST00000338663 MYT1Q01538 1121 aa25.46■■□□□ 1.67
SLC3A2-201ENST00000338663 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms