RNA–Protein interactions for RNA: ENST00000338448.9

PALM-202, Transcript of paralemmin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PALM, Length 2,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-202ENST00000338448 NEFLP07196 543 aa29.26■■■□□ 2.27
PALM-202ENST00000338448 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
PALM-202ENST00000338448 PPP1R15AO75807 674 aaPredicted RBP29.23■■■□□ 2.27
PALM-202ENST00000338448 RBM19Q9Y4C8 960 aaKnown RBP29.2■■■□□ 2.27
PALM-202ENST00000338448 PHLDB1Q86UU1 1377 aa29.15■■■□□ 2.26
PALM-202ENST00000338448 TIAM1Q13009 1591 aa29.14■■■□□ 2.26
PALM-202ENST00000338448 ANP32CO43423 234 aa29.14■■■□□ 2.25
PALM-202ENST00000338448 BCL11AQ9H165 835 aa29.14■■■□□ 2.25
PALM-202ENST00000338448 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
PALM-202ENST00000338448 LRRC9Q6ZRR7 1453 aa29.08■■■□□ 2.25
PALM-202ENST00000338448 CCER2I3L3R5 266 aa29.07■■■□□ 2.24
PALM-202ENST00000338448 P3H3Q8IVL6 736 aa29.06■■■□□ 2.24
PALM-202ENST00000338448 IGF1RP08069 1367 aa29.04■■■□□ 2.24
PALM-202ENST00000338448 TIMELESSQ9UNS1 1208 aa29.01■■■□□ 2.24
PALM-202ENST00000338448 MAP3K1Q13233 1512 aa29.01■■■□□ 2.23
PALM-202ENST00000338448 CARMIL1Q5VZK9 1371 aa28.95■■■□□ 2.23
PALM-202ENST00000338448 CFTRP13569 1480 aa28.94■■■□□ 2.22
PALM-202ENST00000338448 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
PALM-202ENST00000338448 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
PALM-202ENST00000338448 TONSLQ96HA7 1378 aa28.87■■■□□ 2.21
PALM-202ENST00000338448 MSH5O43196 834 aa28.86■■■□□ 2.21
PALM-202ENST00000338448 IRX6P78412 446 aaPredicted RBP28.86■■■□□ 2.21
PALM-202ENST00000338448 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
PALM-202ENST00000338448 HNRNPUQ00839 825 aaKnown RBP eCLIP28.82■■■□□ 2.2
PALM-202ENST00000338448 PCF11O94913 1555 aaKnown RBP28.81■■■□□ 2.2
PALM-202ENST00000338448 CFAP43Q8NDM7 1665 aa28.76■■■□□ 2.2
PALM-202ENST00000338448 FHOD3Q2V2M9 1422 aa28.76■■■□□ 2.19
PALM-202ENST00000338448 CDK11AQ9UQ88 783 aaPredicted RBP28.73■■■□□ 2.19
PALM-202ENST00000338448 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
PALM-202ENST00000338448 CCDC18Q5T9S5 1454 aa28.67■■■□□ 2.18
PALM-202ENST00000338448 ERICH6Q7L0X2 663 aa28.64■■■□□ 2.18
PALM-202ENST00000338448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.18
PALM-202ENST00000338448 FANCIQ9NVI1 1328 aa28.63■■■□□ 2.17
PALM-202ENST00000338448 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
PALM-202ENST00000338448 FYCO1Q9BQS8 1478 aa28.6■■■□□ 2.17
PALM-202ENST00000338448 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
PALM-202ENST00000338448 UACAQ9BZF9 1416 aa28.59■■■□□ 2.17
PALM-202ENST00000338448 CASKIN1Q8WXD9 1431 aa28.58■■■□□ 2.17
PALM-202ENST00000338448 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
PALM-202ENST00000338448 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
PALM-202ENST00000338448 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
PALM-202ENST00000338448 HFM1A2PYH4 1435 aa28.54■■■□□ 2.16
PALM-202ENST00000338448 HSPA5P11021 654 aaKnown RBP28.54■■■□□ 2.16
PALM-202ENST00000338448 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
PALM-202ENST00000338448 CCDC184Q52MB2 194 aa28.51■■■□□ 2.16
PALM-202ENST00000338448 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.157e-6■■□□□ 13.1
PALM-202ENST00000338448 PTPN23Q9H3S7 1636 aa28.5■■■□□ 2.15
PALM-202ENST00000338448 NAIPQ13075 1403 aa28.48■■■□□ 2.15
PALM-202ENST00000338448 PPP4R2Q9NY27 417 aa28.48■■■□□ 2.15
PALM-202ENST00000338448 FAM9BQ8IZU0 186 aa28.45■■■□□ 2.14
PALM-202ENST00000338448 KDM5BQ9UGL1 1544 aa28.44■■■□□ 2.14
PALM-202ENST00000338448 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
PALM-202ENST00000338448 RRP7BPQ9NSQ0 103 aa28.44■■■□□ 2.14
PALM-202ENST00000338448 RAD54L2Q9Y4B4 1467 aa28.44■■■□□ 2.14
PALM-202ENST00000338448 B4GALNT3Q6L9W6 998 aa28.42■■■□□ 2.14
PALM-202ENST00000338448 CHIC2Q9UKJ5 165 aa28.42■■■□□ 2.14
PALM-202ENST00000338448 FMN1Q68DA7 1419 aa28.41■■■□□ 2.14
PALM-202ENST00000338448 EIF4G2P78344 907 aaKnown RBP eCLIP28.41■■■□□ 2.142e-7■■■■■ 50.7
PALM-202ENST00000338448 ERICH6BQ5W0A0 696 aa28.4■■■□□ 2.14
PALM-202ENST00000338448 NCOA2Q15596 1464 aa28.35■■■□□ 2.13
PALM-202ENST00000338448 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
PALM-202ENST00000338448 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
PALM-202ENST00000338448 MRS2Q9HD23 443 aa28.34■■■□□ 2.13
PALM-202ENST00000338448 C11orf95C9JLR9 678 aaPredicted RBP28.34■■■□□ 2.13
PALM-202ENST00000338448 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
PALM-202ENST00000338448 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
PALM-202ENST00000338448 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
PALM-202ENST00000338448 L3MBTL2Q969R5 705 aa28.27■■■□□ 2.12
PALM-202ENST00000338448 FOXD1Q16676 465 aa28.27■■■□□ 2.12
PALM-202ENST00000338448 CTTNBP2Q8WZ74 1663 aa28.26■■■□□ 2.11
PALM-202ENST00000338448 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
PALM-202ENST00000338448 POLA1P09884 1462 aaPredicted RBP28.23■■■□□ 2.11
PALM-202ENST00000338448 ZBED9Q6R2W3 1325 aa28.23■■■□□ 2.11
PALM-202ENST00000338448 CCDC7Q96M83 1385 aa28.22■■■□□ 2.11
PALM-202ENST00000338448 LRRIQ1Q96JM4 1722 aa28.22■■■□□ 2.11
PALM-202ENST00000338448 DENND4BO75064 1496 aaPredicted RBP28.21■■■□□ 2.11
PALM-202ENST00000338448 MPHOSPH9Q99550 1183 aa28.21■■■□□ 2.11
PALM-202ENST00000338448 DEKP35659 375 aaKnown RBP28.2■■■□□ 2.1
PALM-202ENST00000338448 CNGB1Q14028 1251 aaPredicted RBP28.19■■■□□ 2.1
PALM-202ENST00000338448 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
PALM-202ENST00000338448 CUL7Q14999 1698 aa28.18■■■□□ 2.1
PALM-202ENST00000338448 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
PALM-202ENST00000338448 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
PALM-202ENST00000338448 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
PALM-202ENST00000338448 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
PALM-202ENST00000338448 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
PALM-202ENST00000338448 NBR1Q14596 966 aa28.13■■■□□ 2.09
PALM-202ENST00000338448 MYT1LQ9UL68 1186 aa28.13■■■□□ 2.09
PALM-202ENST00000338448 NBPF8Q3BBV2 869 aa28.12■■■□□ 2.09
PALM-202ENST00000338448 NOP58Q9Y2X3 529 aaKnown RBP28.12■■■□□ 2.09
PALM-202ENST00000338448 KDM6BO15054 1643 aa28.12■■■□□ 2.09
PALM-202ENST00000338448 EHBP1L1Q8N3D4 1523 aa28.11■■■□□ 2.09
PALM-202ENST00000338448 PAK3O75914 559 aaPredicted RBP28.1■■■□□ 2.09
PALM-202ENST00000338448 UGGT2Q9NYU1 1516 aa28.1■■■□□ 2.09
PALM-202ENST00000338448 KIF7Q2M1P5 1343 aa28.09■■■□□ 2.09
PALM-202ENST00000338448 HECW1Q76N89 1606 aa28.08■■■□□ 2.09
PALM-202ENST00000338448 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.09
PALM-202ENST00000338448 MAGI3Q5TCQ9 1506 aa28.07■■■□□ 2.08
PALM-202ENST00000338448 SENP3-EIF4A1A0A087X0R7 540 aa28.07■■■□□ 2.08
PALM-202ENST00000338448 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms