RNA–Protein interactions for RNA: ENST00000336926.10

HIP1-201, Transcript of huntingtin interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIP1, Length 8,013 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-201ENST00000336926 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
HIP1-201ENST00000336926 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
HIP1-201ENST00000336926 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
HIP1-201ENST00000336926 EIF4G2P78344 907 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■■■■■ 42.5
HIP1-201ENST00000336926 EIF5BO60841 1220 aaKnown RBP11.9□□□□□ -0.5
HIP1-201ENST00000336926 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
HIP1-201ENST00000336926 CDCA8Q53HL2 280 aa11.89□□□□□ -0.51
HIP1-201ENST00000336926 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
HIP1-201ENST00000336926 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
HIP1-201ENST00000336926 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
HIP1-201ENST00000336926 PLEKHD1A6NEE1 506 aa11.88□□□□□ -0.51
HIP1-201ENST00000336926 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
HIP1-201ENST00000336926 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
HIP1-201ENST00000336926 PPP1R15AO75807 674 aaPredicted RBP11.85□□□□□ -0.51
HIP1-201ENST00000336926 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
HIP1-201ENST00000336926 DDRGK1Q96HY6 314 aa11.81□□□□□ -0.52
HIP1-201ENST00000336926 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
HIP1-201ENST00000336926 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
HIP1-201ENST00000336926 BECN1Q14457 450 aa11.81□□□□□ -0.52
HIP1-201ENST00000336926 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
HIP1-201ENST00000336926 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
HIP1-201ENST00000336926 GLIPR1L2Q4G1C9 344 aa11.8□□□□□ -0.52
HIP1-201ENST00000336926 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
HIP1-201ENST00000336926 A0A0G2JS52 829 aa11.8□□□□□ -0.52
HIP1-201ENST00000336926 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
HIP1-201ENST00000336926 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
HIP1-201ENST00000336926 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
HIP1-201ENST00000336926 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
HIP1-201ENST00000336926 KNSTRNQ9Y448 316 aa11.75□□□□□ -0.53
HIP1-201ENST00000336926 CASC1Q6TDU7 716 aa11.75□□□□□ -0.53
HIP1-201ENST00000336926 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
HIP1-201ENST00000336926 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
HIP1-201ENST00000336926 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
HIP1-201ENST00000336926 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
HIP1-201ENST00000336926 GOLGA6L22H0YM25 854 aa11.72□□□□□ -0.53
HIP1-201ENST00000336926 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
HIP1-201ENST00000336926 KANK1Q14678 1352 aa11.71□□□□□ -0.53
HIP1-201ENST00000336926 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
HIP1-201ENST00000336926 MYO15BQ96JP2 1530 aa11.69□□□□□ -0.54
HIP1-201ENST00000336926 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
HIP1-201ENST00000336926 MS4A1P11836 297 aa11.68□□□□□ -0.54
HIP1-201ENST00000336926 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
HIP1-201ENST00000336926 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
HIP1-201ENST00000336926 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
HIP1-201ENST00000336926 MIER1Q8N108 512 aa11.67□□□□□ -0.54
HIP1-201ENST00000336926 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
HIP1-201ENST00000336926 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
HIP1-201ENST00000336926 ARHGAP35Q9NRY4 1499 aa11.66□□□□□ -0.54
HIP1-201ENST00000336926 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
HIP1-201ENST00000336926 NBR1Q14596 966 aa11.65□□□□□ -0.54
HIP1-201ENST00000336926 MAPK8IP3Q9UPT6 1336 aa11.65□□□□□ -0.54
HIP1-201ENST00000336926 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
HIP1-201ENST00000336926 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
HIP1-201ENST00000336926 SENP3Q9H4L4 574 aaPredicted RBP11.64□□□□□ -0.55
HIP1-201ENST00000336926 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
HIP1-201ENST00000336926 CARMIL2Q6F5E8 1435 aa11.63□□□□□ -0.55
HIP1-201ENST00000336926 CUX2O14529 1486 aa11.63□□□□□ -0.55
HIP1-201ENST00000336926 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
HIP1-201ENST00000336926 WIZO95785 1651 aa11.62□□□□□ -0.55
HIP1-201ENST00000336926 CARMIL1Q5VZK9 1371 aa11.62□□□□□ -0.55
HIP1-201ENST00000336926 POGKQ9P215 609 aa11.61□□□□□ -0.55
HIP1-201ENST00000336926 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
HIP1-201ENST00000336926 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
HIP1-201ENST00000336926 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
HIP1-201ENST00000336926 MLECQ14165 292 aa11.59□□□□□ -0.55
HIP1-201ENST00000336926 TMF1P82094 1093 aa11.59□□□□□ -0.55
HIP1-201ENST00000336926 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
HIP1-201ENST00000336926 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
HIP1-201ENST00000336926 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
HIP1-201ENST00000336926 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
HIP1-201ENST00000336926 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
HIP1-201ENST00000336926 SETD5Q9C0A6 1442 aa11.56□□□□□ -0.56
HIP1-201ENST00000336926 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
HIP1-201ENST00000336926 SOGA1O94964 1423 aa11.55□□□□□ -0.56
HIP1-201ENST00000336926 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
HIP1-201ENST00000336926 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
HIP1-201ENST00000336926 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
HIP1-201ENST00000336926 ARXQ96QS3 562 aa11.53□□□□□ -0.56
HIP1-201ENST00000336926 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
HIP1-201ENST00000336926 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
HIP1-201ENST00000336926 LAS1LQ9Y4W2 734 aaKnown RBP11.52□□□□□ -0.57
HIP1-201ENST00000336926 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
HIP1-201ENST00000336926 GOLGA6L6A8MZA4 724 aa11.51□□□□□ -0.57
HIP1-201ENST00000336926 NPHP1O15259 732 aa11.5□□□□□ -0.57
HIP1-201ENST00000336926 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
HIP1-201ENST00000336926 EIF3AQ14152 1382 aaKnown RBP11.5□□□□□ -0.57
HIP1-201ENST00000336926 CCER2I3L3R5 266 aa11.49□□□□□ -0.57
HIP1-201ENST00000336926 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
HIP1-201ENST00000336926 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
HIP1-201ENST00000336926 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
HIP1-201ENST00000336926 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
HIP1-201ENST00000336926 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
HIP1-201ENST00000336926 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
HIP1-201ENST00000336926 NRDCO43847 1150 aa11.47□□□□□ -0.57
HIP1-201ENST00000336926 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
HIP1-201ENST00000336926 MCCP23508 829 aa11.47□□□□□ -0.57
HIP1-201ENST00000336926 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
HIP1-201ENST00000336926 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
HIP1-201ENST00000336926 KTN1Q86UP2 1357 aaKnown RBP11.47□□□□□ -0.57
HIP1-201ENST00000336926 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms