RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
FGFR1-202ENST00000335922 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
FGFR1-202ENST00000335922 SENP3-EIF4A1A0A087X0R7 540 aa20.35■□□□□ 0.85
FGFR1-202ENST00000335922 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
FGFR1-202ENST00000335922 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
FGFR1-202ENST00000335922 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.854e-7■■□□□ 13.9
FGFR1-202ENST00000335922 TSPY4P0CV99 314 aa20.32■□□□□ 0.84
FGFR1-202ENST00000335922 TSPY10P0CW01 314 aa20.32■□□□□ 0.84
FGFR1-202ENST00000335922 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
FGFR1-202ENST00000335922 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
FGFR1-202ENST00000335922 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
FGFR1-202ENST00000335922 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
FGFR1-202ENST00000335922 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
FGFR1-202ENST00000335922 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
FGFR1-202ENST00000335922 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
FGFR1-202ENST00000335922 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
FGFR1-202ENST00000335922 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
FGFR1-202ENST00000335922 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
FGFR1-202ENST00000335922 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
FGFR1-202ENST00000335922 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
FGFR1-202ENST00000335922 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
FGFR1-202ENST00000335922 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
FGFR1-202ENST00000335922 VPS8Q8N3P4 1428 aa20.13■□□□□ 0.81
FGFR1-202ENST00000335922 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
FGFR1-202ENST00000335922 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
FGFR1-202ENST00000335922 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
FGFR1-202ENST00000335922 NESP48681 1621 aa20.08■□□□□ 0.8
FGFR1-202ENST00000335922 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
FGFR1-202ENST00000335922 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
FGFR1-202ENST00000335922 ANP32EQ9BTT0 268 aa20.03■□□□□ 0.8
FGFR1-202ENST00000335922 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
FGFR1-202ENST00000335922 ARID4BQ4LE39 1312 aaPredicted RBP20.03■□□□□ 0.8
FGFR1-202ENST00000335922 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
FGFR1-202ENST00000335922 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.8
FGFR1-202ENST00000335922 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
FGFR1-202ENST00000335922 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
FGFR1-202ENST00000335922 NBR1Q14596 966 aa20■□□□□ 0.79
FGFR1-202ENST00000335922 MRS2Q9HD23 443 aa19.99■□□□□ 0.79
FGFR1-202ENST00000335922 BICRAQ9NZM4 1560 aa19.99■□□□□ 0.79
FGFR1-202ENST00000335922 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
FGFR1-202ENST00000335922 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
FGFR1-202ENST00000335922 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
FGFR1-202ENST00000335922 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
FGFR1-202ENST00000335922 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
FGFR1-202ENST00000335922 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
FGFR1-202ENST00000335922 CARMIL2Q6F5E8 1435 aa19.92■□□□□ 0.78
FGFR1-202ENST00000335922 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
FGFR1-202ENST00000335922 MLECQ14165 292 aa19.91■□□□□ 0.78
FGFR1-202ENST00000335922 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
FGFR1-202ENST00000335922 RBM19Q9Y4C8 960 aaKnown RBP19.88■□□□□ 0.77
FGFR1-202ENST00000335922 FOXD1Q16676 465 aa19.84■□□□□ 0.77
FGFR1-202ENST00000335922 B4GALNT3Q6L9W6 998 aa19.84■□□□□ 0.77
FGFR1-202ENST00000335922 IGF1RP08069 1367 aa19.84■□□□□ 0.77
FGFR1-202ENST00000335922 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
FGFR1-202ENST00000335922 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.76
FGFR1-202ENST00000335922 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
FGFR1-202ENST00000335922 CCDC136Q96JN2 1154 aa19.81■□□□□ 0.76
FGFR1-202ENST00000335922 CFTRP13569 1480 aa19.8■□□□□ 0.76
FGFR1-202ENST00000335922 EIF5BO60841 1220 aaKnown RBP19.78■□□□□ 0.76
FGFR1-202ENST00000335922 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
FGFR1-202ENST00000335922 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.76
FGFR1-202ENST00000335922 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
FGFR1-202ENST00000335922 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
FGFR1-202ENST00000335922 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
FGFR1-202ENST00000335922 GGT6Q6P531 493 aa19.76■□□□□ 0.75
FGFR1-202ENST00000335922 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
FGFR1-202ENST00000335922 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
FGFR1-202ENST00000335922 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.746e-6■□□□□ 8.8
FGFR1-202ENST00000335922 EFCAB2Q5VUJ9 269 aa19.69■□□□□ 0.74
FGFR1-202ENST00000335922 BCL11AQ9H165 835 aa19.69■□□□□ 0.74
FGFR1-202ENST00000335922 PTPRGP23470 1445 aa19.68■□□□□ 0.74
FGFR1-202ENST00000335922 HSPA5P11021 654 aaKnown RBP19.68■□□□□ 0.74
FGFR1-202ENST00000335922 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
FGFR1-202ENST00000335922 KIF21BO75037 1637 aa19.62■□□□□ 0.73
FGFR1-202ENST00000335922 ARHGAP35Q9NRY4 1499 aa19.61■□□□□ 0.73
FGFR1-202ENST00000335922 C14orf37Q86TY3 774 aa19.61■□□□□ 0.73
FGFR1-202ENST00000335922 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
FGFR1-202ENST00000335922 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
FGFR1-202ENST00000335922 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
FGFR1-202ENST00000335922 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
FGFR1-202ENST00000335922 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
FGFR1-202ENST00000335922 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.73
FGFR1-202ENST00000335922 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
FGFR1-202ENST00000335922 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
FGFR1-202ENST00000335922 KIF3BO15066 747 aa19.55■□□□□ 0.72
FGFR1-202ENST00000335922 NEFMP07197 916 aa19.54■□□□□ 0.72
FGFR1-202ENST00000335922 PKD2Q13563 968 aa19.54■□□□□ 0.72
FGFR1-202ENST00000335922 CUX1P39880 1505 aa19.53■□□□□ 0.72
FGFR1-202ENST00000335922 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
FGFR1-202ENST00000335922 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
FGFR1-202ENST00000335922 DCAF11Q8TEB1 546 aa19.52■□□□□ 0.71
FGFR1-202ENST00000335922 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
FGFR1-202ENST00000335922 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
FGFR1-202ENST00000335922 RTN4Q9NQC3 1192 aaKnown RBP19.5■□□□□ 0.71
FGFR1-202ENST00000335922 PHLDB1Q86UU1 1377 aa19.49■□□□□ 0.71
FGFR1-202ENST00000335922 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
FGFR1-202ENST00000335922 SPAG9O60271 1321 aaKnown RBP19.48■□□□□ 0.71
FGFR1-202ENST00000335922 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
FGFR1-202ENST00000335922 ZBTB7CA1YPR0 619 aa19.47■□□□□ 0.71
FGFR1-202ENST00000335922 ARXQ96QS3 562 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms