RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
APOBEC3B-202ENST00000335760 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
APOBEC3B-202ENST00000335760 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
APOBEC3B-202ENST00000335760 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
APOBEC3B-202ENST00000335760 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
APOBEC3B-202ENST00000335760 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
APOBEC3B-202ENST00000335760 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
APOBEC3B-202ENST00000335760 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
APOBEC3B-202ENST00000335760 PRG4Q92954 1404 aaPredicted RBP22.92■■□□□ 1.26
APOBEC3B-202ENST00000335760 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
APOBEC3B-202ENST00000335760 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
APOBEC3B-202ENST00000335760 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.25
APOBEC3B-202ENST00000335760 RIMBP3CA6NJZ7 1639 aa22.88■■□□□ 1.25
APOBEC3B-202ENST00000335760 RIMBP3BA6NNM3 1639 aa22.88■■□□□ 1.25
APOBEC3B-202ENST00000335760 RIMBP3Q9UFD9 1639 aa22.88■■□□□ 1.25
APOBEC3B-202ENST00000335760 ERCC6L2Q5T890 1561 aa22.88■■□□□ 1.25
APOBEC3B-202ENST00000335760 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
APOBEC3B-202ENST00000335760 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
APOBEC3B-202ENST00000335760 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
APOBEC3B-202ENST00000335760 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
APOBEC3B-202ENST00000335760 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
APOBEC3B-202ENST00000335760 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
APOBEC3B-202ENST00000335760 SAMD9Q5K651 1589 aa22.75■■□□□ 1.23
APOBEC3B-202ENST00000335760 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
APOBEC3B-202ENST00000335760 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
APOBEC3B-202ENST00000335760 EFCAB5A4FU69 1503 aa22.72■■□□□ 1.23
APOBEC3B-202ENST00000335760 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
APOBEC3B-202ENST00000335760 PTPRGP23470 1445 aa22.69■■□□□ 1.22
APOBEC3B-202ENST00000335760 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
APOBEC3B-202ENST00000335760 CLIP1P30622 1438 aa22.67■■□□□ 1.22
APOBEC3B-202ENST00000335760 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
APOBEC3B-202ENST00000335760 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
APOBEC3B-202ENST00000335760 UACAQ9BZF9 1416 aa22.54■■□□□ 1.2
APOBEC3B-202ENST00000335760 PLB1Q6P1J6 1458 aa22.53■■□□□ 1.2
APOBEC3B-202ENST00000335760 ABCA8O94911 1581 aa22.51■■□□□ 1.19
APOBEC3B-202ENST00000335760 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
APOBEC3B-202ENST00000335760 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
APOBEC3B-202ENST00000335760 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
APOBEC3B-202ENST00000335760 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
APOBEC3B-202ENST00000335760 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
APOBEC3B-202ENST00000335760 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
APOBEC3B-202ENST00000335760 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
APOBEC3B-202ENST00000335760 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
APOBEC3B-202ENST00000335760 PCF11O94913 1555 aaKnown RBP22.38■■□□□ 1.17
APOBEC3B-202ENST00000335760 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
APOBEC3B-202ENST00000335760 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
APOBEC3B-202ENST00000335760 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
APOBEC3B-202ENST00000335760 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
APOBEC3B-202ENST00000335760 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
APOBEC3B-202ENST00000335760 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
APOBEC3B-202ENST00000335760 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
APOBEC3B-202ENST00000335760 ATP10BO94823 1461 aa22.34■■□□□ 1.17
APOBEC3B-202ENST00000335760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
APOBEC3B-202ENST00000335760 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
APOBEC3B-202ENST00000335760 EPRSP07814 1512 aaKnown RBP22.3■■□□□ 1.16
APOBEC3B-202ENST00000335760 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
APOBEC3B-202ENST00000335760 LRRIQ1Q96JM4 1722 aa22.29■■□□□ 1.16
APOBEC3B-202ENST00000335760 MAPKBP1O60336 1514 aa22.27■■□□□ 1.16
APOBEC3B-202ENST00000335760 ASXL2Q76L83 1435 aa22.25■■□□□ 1.15
APOBEC3B-202ENST00000335760 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
APOBEC3B-202ENST00000335760 WDR7Q9Y4E6 1490 aa22.19■■□□□ 1.14
APOBEC3B-202ENST00000335760 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
APOBEC3B-202ENST00000335760 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
APOBEC3B-202ENST00000335760 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
APOBEC3B-202ENST00000335760 TRHP20396 242 aaPredicted RBP22.13■■□□□ 1.13
APOBEC3B-202ENST00000335760 APLP2Q06481 763 aa22.13■■□□□ 1.13
APOBEC3B-202ENST00000335760 ABCC10Q5T3U5 1492 aa22.13■■□□□ 1.13
APOBEC3B-202ENST00000335760 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
APOBEC3B-202ENST00000335760 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
APOBEC3B-202ENST00000335760 DIP2BQ9P265 1576 aa22.11■■□□□ 1.13
APOBEC3B-202ENST00000335760 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
APOBEC3B-202ENST00000335760 MAGI3Q5TCQ9 1506 aa22.1■■□□□ 1.13
APOBEC3B-202ENST00000335760 TROQ12816 1431 aaPredicted RBP22.1■■□□□ 1.13
APOBEC3B-202ENST00000335760 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
APOBEC3B-202ENST00000335760 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
APOBEC3B-202ENST00000335760 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
APOBEC3B-202ENST00000335760 GLI2P10070 1586 aa22.06■■□□□ 1.12
APOBEC3B-202ENST00000335760 KIF14Q15058 1648 aa22.03■■□□□ 1.12
APOBEC3B-202ENST00000335760 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
APOBEC3B-202ENST00000335760 EHBP1L1Q8N3D4 1523 aa22.03■■□□□ 1.12
APOBEC3B-202ENST00000335760 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
APOBEC3B-202ENST00000335760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.11
APOBEC3B-202ENST00000335760 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
APOBEC3B-202ENST00000335760 MAP3K4Q9Y6R4 1608 aa21.98■■□□□ 1.11
APOBEC3B-202ENST00000335760 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
APOBEC3B-202ENST00000335760 CD109Q6YHK3 1445 aa21.96■■□□□ 1.11
APOBEC3B-202ENST00000335760 TSPOAP1O95153 1857 aa21.96■■□□□ 1.11
APOBEC3B-202ENST00000335760 SUPT6HQ7KZ85 1726 aaKnown RBP21.95■■□□□ 1.1
APOBEC3B-202ENST00000335760 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
APOBEC3B-202ENST00000335760 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
APOBEC3B-202ENST00000335760 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.09
APOBEC3B-202ENST00000335760 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.09
APOBEC3B-202ENST00000335760 CCNB3Q8WWL7 1395 aa21.88■■□□□ 1.09
APOBEC3B-202ENST00000335760 PLCH2O75038 1416 aa21.86■■□□□ 1.09
APOBEC3B-202ENST00000335760 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
APOBEC3B-202ENST00000335760 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
APOBEC3B-202ENST00000335760 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
APOBEC3B-202ENST00000335760 PREX2Q70Z35 1606 aa21.83■■□□□ 1.09
APOBEC3B-202ENST00000335760 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.09
APOBEC3B-202ENST00000335760 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms