RNA–Protein interactions for RNA: ENST00000335500.8

GPATCH8-201, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 8,109 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-201ENST00000335500 MRS2Q9HD23 443 aa11.71□□□□□ -0.54
GPATCH8-201ENST00000335500 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
GPATCH8-201ENST00000335500 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
GPATCH8-201ENST00000335500 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
GPATCH8-201ENST00000335500 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.55
GPATCH8-201ENST00000335500 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
GPATCH8-201ENST00000335500 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
GPATCH8-201ENST00000335500 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
GPATCH8-201ENST00000335500 CHGAP10645 457 aaKnown RBP11.61□□□□□ -0.55
GPATCH8-201ENST00000335500 CHMP7Q8WUX9 453 aaPredicted RBP11.59□□□□□ -0.55
GPATCH8-201ENST00000335500 MIER1Q8N108 512 aa11.59□□□□□ -0.55
GPATCH8-201ENST00000335500 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
GPATCH8-201ENST00000335500 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
GPATCH8-201ENST00000335500 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
GPATCH8-201ENST00000335500 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
GPATCH8-201ENST00000335500 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
GPATCH8-201ENST00000335500 MS4A1P11836 297 aa11.57□□□□□ -0.56
GPATCH8-201ENST00000335500 MYO15BQ96JP2 1530 aa11.57□□□□□ -0.56
GPATCH8-201ENST00000335500 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
GPATCH8-201ENST00000335500 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
GPATCH8-201ENST00000335500 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
GPATCH8-201ENST00000335500 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
GPATCH8-201ENST00000335500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■■□□ 14.8
GPATCH8-201ENST00000335500 SMARCA2P51531 1590 aa11.55□□□□□ -0.56
GPATCH8-201ENST00000335500 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
GPATCH8-201ENST00000335500 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
GPATCH8-201ENST00000335500 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
GPATCH8-201ENST00000335500 NBR1Q14596 966 aa11.54□□□□□ -0.56
GPATCH8-201ENST00000335500 ERICH6BQ5W0A0 696 aa11.52□□□□□ -0.56
GPATCH8-201ENST00000335500 CCNB3Q8WWL7 1395 aa11.52□□□□□ -0.56
GPATCH8-201ENST00000335500 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
GPATCH8-201ENST00000335500 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
GPATCH8-201ENST00000335500 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
GPATCH8-201ENST00000335500 CDK11BP21127 795 aaKnown RBP11.5□□□□□ -0.57
GPATCH8-201ENST00000335500 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
GPATCH8-201ENST00000335500 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
GPATCH8-201ENST00000335500 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
GPATCH8-201ENST00000335500 CCER2I3L3R5 266 aa11.48□□□□□ -0.57
GPATCH8-201ENST00000335500 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
GPATCH8-201ENST00000335500 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
GPATCH8-201ENST00000335500 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
GPATCH8-201ENST00000335500 NUDCQ9Y266 331 aa11.46□□□□□ -0.57
GPATCH8-201ENST00000335500 VPS8Q8N3P4 1428 aa11.46□□□□□ -0.57
GPATCH8-201ENST00000335500 ZRSR1Q15695 479 aaKnown RBP11.46□□□□□ -0.58
GPATCH8-201ENST00000335500 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
GPATCH8-201ENST00000335500 CARD11Q9BXL7 1154 aa11.44□□□□□ -0.58
GPATCH8-201ENST00000335500 KANK1Q14678 1352 aa11.44□□□□□ -0.58
GPATCH8-201ENST00000335500 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
GPATCH8-201ENST00000335500 PTMSP20962 102 aa11.42□□□□□ -0.58
GPATCH8-201ENST00000335500 PPP1R15AO75807 674 aaPredicted RBP11.42□□□□□ -0.58
GPATCH8-201ENST00000335500 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
GPATCH8-201ENST00000335500 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
GPATCH8-201ENST00000335500 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.58
GPATCH8-201ENST00000335500 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
GPATCH8-201ENST00000335500 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.58
GPATCH8-201ENST00000335500 NRDCO43847 1150 aa11.4□□□□□ -0.58
GPATCH8-201ENST00000335500 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
GPATCH8-201ENST00000335500 TMF1P82094 1093 aa11.38□□□□□ -0.59
GPATCH8-201ENST00000335500 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
GPATCH8-201ENST00000335500 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
GPATCH8-201ENST00000335500 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
GPATCH8-201ENST00000335500 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
GPATCH8-201ENST00000335500 CUX2O14529 1486 aa11.35□□□□□ -0.59
GPATCH8-201ENST00000335500 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
GPATCH8-201ENST00000335500 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
GPATCH8-201ENST00000335500 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
GPATCH8-201ENST00000335500 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 WIZO95785 1651 aa11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-201ENST00000335500 MCCP23508 829 aa11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 ARXQ96QS3 562 aa11.32□□□□□ -0.6
GPATCH8-201ENST00000335500 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 RALBP1Q15311 655 aa11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
GPATCH8-201ENST00000335500 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
GPATCH8-201ENST00000335500 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
GPATCH8-201ENST00000335500 POGKQ9P215 609 aa11.29□□□□□ -0.6
GPATCH8-201ENST00000335500 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
GPATCH8-201ENST00000335500 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
GPATCH8-201ENST00000335500 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
GPATCH8-201ENST00000335500 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
GPATCH8-201ENST00000335500 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
GPATCH8-201ENST00000335500 RSPH4AQ5TD94 716 aa11.26□□□□□ -0.61
GPATCH8-201ENST00000335500 CECR2Q9BXF3 1484 aa11.26□□□□□ -0.61
GPATCH8-201ENST00000335500 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
GPATCH8-201ENST00000335500 C14orf37Q86TY3 774 aa11.25□□□□□ -0.61
GPATCH8-201ENST00000335500 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
GPATCH8-201ENST00000335500 SOGA1O94964 1423 aa11.24□□□□□ -0.61
GPATCH8-201ENST00000335500 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
GPATCH8-201ENST00000335500 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms