RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 MSNP26038 577 aaKnown RBP17.55■□□□□ 0.4
BRWD1-201ENST00000333229 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
BRWD1-201ENST00000333229 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
BRWD1-201ENST00000333229 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
BRWD1-201ENST00000333229 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
BRWD1-201ENST00000333229 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
BRWD1-201ENST00000333229 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
BRWD1-201ENST00000333229 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
BRWD1-201ENST00000333229 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
BRWD1-201ENST00000333229 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
BRWD1-201ENST00000333229 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
BRWD1-201ENST00000333229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■□□□ 11.5
BRWD1-201ENST00000333229 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
BRWD1-201ENST00000333229 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
BRWD1-201ENST00000333229 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
BRWD1-201ENST00000333229 DEKP35659 375 aaKnown RBP17.37■□□□□ 0.37
BRWD1-201ENST00000333229 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRWD1-201ENST00000333229 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
BRWD1-201ENST00000333229 GOLGA6L1Q8N7Z2 621 aa17.36■□□□□ 0.37
BRWD1-201ENST00000333229 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
BRWD1-201ENST00000333229 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
BRWD1-201ENST00000333229 PLCB2Q00722 1185 aa17.33■□□□□ 0.37
BRWD1-201ENST00000333229 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
BRWD1-201ENST00000333229 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
BRWD1-201ENST00000333229 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
BRWD1-201ENST00000333229 APPP05067 770 aa17.31■□□□□ 0.36
BRWD1-201ENST00000333229 ABCC9O60706 1549 aa17.3■□□□□ 0.36
BRWD1-201ENST00000333229 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
BRWD1-201ENST00000333229 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
BRWD1-201ENST00000333229 HSP90AA2PQ14568 343 aaPredicted RBP17.3■□□□□ 0.36
BRWD1-201ENST00000333229 ARID3AQ99856 593 aa17.28■□□□□ 0.36
BRWD1-201ENST00000333229 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
BRWD1-201ENST00000333229 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
BRWD1-201ENST00000333229 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
BRWD1-201ENST00000333229 KDM2AQ9Y2K7 1162 aa17.25■□□□□ 0.35
BRWD1-201ENST00000333229 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
BRWD1-201ENST00000333229 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
BRWD1-201ENST00000333229 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
BRWD1-201ENST00000333229 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
BRWD1-201ENST00000333229 A0A0U1RQG5 324 aaPredicted RBP17.22■□□□□ 0.35
BRWD1-201ENST00000333229 CLSTN1O94985 981 aa17.21■□□□□ 0.35
BRWD1-201ENST00000333229 NPHP1O15259 732 aa17.18■□□□□ 0.34
BRWD1-201ENST00000333229 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
BRWD1-201ENST00000333229 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
BRWD1-201ENST00000333229 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
BRWD1-201ENST00000333229 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
BRWD1-201ENST00000333229 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
BRWD1-201ENST00000333229 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
BRWD1-201ENST00000333229 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
BRWD1-201ENST00000333229 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.33
BRWD1-201ENST00000333229 PODXL2Q9NZ53 605 aa17.07■□□□□ 0.32
BRWD1-201ENST00000333229 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
BRWD1-201ENST00000333229 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
BRWD1-201ENST00000333229 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
BRWD1-201ENST00000333229 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
BRWD1-201ENST00000333229 ZNF771Q7L3S4 317 aaPredicted RBP17.04■□□□□ 0.32
BRWD1-201ENST00000333229 FGD1P98174 961 aa17.03■□□□□ 0.32
BRWD1-201ENST00000333229 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
BRWD1-201ENST00000333229 NOM1Q5C9Z4 860 aaKnown RBP17.02■□□□□ 0.32
BRWD1-201ENST00000333229 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
BRWD1-201ENST00000333229 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
BRWD1-201ENST00000333229 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
BRWD1-201ENST00000333229 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
BRWD1-201ENST00000333229 RRP12Q5JTH9 1297 aaKnown RBP16.98■□□□□ 0.31
BRWD1-201ENST00000333229 SYAP1Q96A49 352 aaPredicted RBP16.97■□□□□ 0.31
BRWD1-201ENST00000333229 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
BRWD1-201ENST00000333229 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
BRWD1-201ENST00000333229 KCNJ4P48050 445 aa16.95■□□□□ 0.3
BRWD1-201ENST00000333229 GPS2Q13227 327 aa16.95■□□□□ 0.3
BRWD1-201ENST00000333229 TEX35Q5T0J7 233 aa16.93■□□□□ 0.3
BRWD1-201ENST00000333229 PRM3Q9NNZ6 103 aa16.93■□□□□ 0.3
BRWD1-201ENST00000333229 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
BRWD1-201ENST00000333229 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
BRWD1-201ENST00000333229 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
BRWD1-201ENST00000333229 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
BRWD1-201ENST00000333229 TPM4P67936 248 aa16.91■□□□□ 0.3
BRWD1-201ENST00000333229 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
BRWD1-201ENST00000333229 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
BRWD1-201ENST00000333229 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
BRWD1-201ENST00000333229 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
BRWD1-201ENST00000333229 RGS3P49796 1198 aa16.89■□□□□ 0.29
BRWD1-201ENST00000333229 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
BRWD1-201ENST00000333229 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
BRWD1-201ENST00000333229 MCCP23508 829 aa16.86■□□□□ 0.29
BRWD1-201ENST00000333229 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
BRWD1-201ENST00000333229 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
BRWD1-201ENST00000333229 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
BRWD1-201ENST00000333229 PDE4CQ08493 712 aa16.85■□□□□ 0.29
BRWD1-201ENST00000333229 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
BRWD1-201ENST00000333229 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
BRWD1-201ENST00000333229 CFAP44Q96MT7 982 aa16.84■□□□□ 0.29
BRWD1-201ENST00000333229 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.29
BRWD1-201ENST00000333229 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.29
BRWD1-201ENST00000333229 PHF14O94880 888 aa16.83■□□□□ 0.28
BRWD1-201ENST00000333229 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
BRWD1-201ENST00000333229 GNL2Q13823 731 aaKnown RBP16.82■□□□□ 0.28
BRWD1-201ENST00000333229 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
BRWD1-201ENST00000333229 HMMRO75330 724 aa16.81■□□□□ 0.28
BRWD1-201ENST00000333229 MIER1Q8N108 512 aa16.81■□□□□ 0.28
BRWD1-201ENST00000333229 NEFHP12036 1026 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms