RNA–Protein interactions for RNA: ENST00000324953.9

CD164-203, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-203ENST00000324953 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
CD164-203ENST00000324953 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
CD164-203ENST00000324953 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
CD164-203ENST00000324953 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
CD164-203ENST00000324953 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
CD164-203ENST00000324953 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
CD164-203ENST00000324953 ANP32CO43423 234 aa13.31□□□□□ -0.28
CD164-203ENST00000324953 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
CD164-203ENST00000324953 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
CD164-203ENST00000324953 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
CD164-203ENST00000324953 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
CD164-203ENST00000324953 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
CD164-203ENST00000324953 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
CD164-203ENST00000324953 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
CD164-203ENST00000324953 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
CD164-203ENST00000324953 SIN3AQ96ST3 1273 aa13.23□□□□□ -0.29
CD164-203ENST00000324953 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
CD164-203ENST00000324953 CFTRP13569 1480 aa13.23□□□□□ -0.29
CD164-203ENST00000324953 CUX1P39880 1505 aa13.22□□□□□ -0.29
CD164-203ENST00000324953 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
CD164-203ENST00000324953 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
CD164-203ENST00000324953 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
CD164-203ENST00000324953 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
CD164-203ENST00000324953 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
CD164-203ENST00000324953 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
CD164-203ENST00000324953 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
CD164-203ENST00000324953 PRDM2Q13029 1718 aa13.18□□□□□ -0.3
CD164-203ENST00000324953 NBR1Q14596 966 aa13.17□□□□□ -0.3
CD164-203ENST00000324953 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
CD164-203ENST00000324953 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
CD164-203ENST00000324953 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
CD164-203ENST00000324953 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
CD164-203ENST00000324953 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
CD164-203ENST00000324953 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
CD164-203ENST00000324953 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
CD164-203ENST00000324953 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
CD164-203ENST00000324953 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
CD164-203ENST00000324953 CFAP43Q8NDM7 1665 aa13.07□□□□□ -0.32
CD164-203ENST00000324953 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
CD164-203ENST00000324953 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
CD164-203ENST00000324953 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
CD164-203ENST00000324953 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
CD164-203ENST00000324953 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
CD164-203ENST00000324953 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
CD164-203ENST00000324953 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
CD164-203ENST00000324953 ZBED9Q6R2W3 1325 aa13.03□□□□□ -0.32
CD164-203ENST00000324953 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
CD164-203ENST00000324953 IGF1RP08069 1367 aa13.02□□□□□ -0.33
CD164-203ENST00000324953 CCDC184Q52MB2 194 aa13.01□□□□□ -0.33
CD164-203ENST00000324953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■■□□ 18.7
CD164-203ENST00000324953 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
CD164-203ENST00000324953 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
CD164-203ENST00000324953 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
CD164-203ENST00000324953 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
CD164-203ENST00000324953 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
CD164-203ENST00000324953 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
CD164-203ENST00000324953 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
CD164-203ENST00000324953 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
CD164-203ENST00000324953 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
CD164-203ENST00000324953 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.33
CD164-203ENST00000324953 UACAQ9BZF9 1416 aa12.96□□□□□ -0.33
CD164-203ENST00000324953 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.34
CD164-203ENST00000324953 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
CD164-203ENST00000324953 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
CD164-203ENST00000324953 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
CD164-203ENST00000324953 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
CD164-203ENST00000324953 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
CD164-203ENST00000324953 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
CD164-203ENST00000324953 AKNAQ7Z591 1439 aa12.93□□□□□ -0.34
CD164-203ENST00000324953 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
CD164-203ENST00000324953 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
CD164-203ENST00000324953 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
CD164-203ENST00000324953 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
CD164-203ENST00000324953 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
CD164-203ENST00000324953 NCOA1Q15788 1441 aa12.9□□□□□ -0.34
CD164-203ENST00000324953 ABCA5Q8WWZ7 1642 aa12.89□□□□□ -0.35
CD164-203ENST00000324953 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
CD164-203ENST00000324953 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
CD164-203ENST00000324953 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
CD164-203ENST00000324953 NEFMP07197 916 aa12.88□□□□□ -0.35
CD164-203ENST00000324953 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.352e-10■■■■□ 24.3
CD164-203ENST00000324953 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
CD164-203ENST00000324953 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
CD164-203ENST00000324953 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
CD164-203ENST00000324953 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
CD164-203ENST00000324953 NAIPQ13075 1403 aa12.85□□□□□ -0.35
CD164-203ENST00000324953 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
CD164-203ENST00000324953 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
CD164-203ENST00000324953 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
CD164-203ENST00000324953 CUL7Q14999 1698 aa12.84□□□□□ -0.35
CD164-203ENST00000324953 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
CD164-203ENST00000324953 POLA1P09884 1462 aaPredicted RBP12.83□□□□□ -0.35
CD164-203ENST00000324953 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
CD164-203ENST00000324953 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
CD164-203ENST00000324953 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
CD164-203ENST00000324953 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
CD164-203ENST00000324953 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
CD164-203ENST00000324953 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
CD164-203ENST00000324953 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
CD164-203ENST00000324953 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms