RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.33
VPS37A-201ENST00000324849 HAP1P54257 671 aaPredicted RBP23.34■■□□□ 1.33
VPS37A-201ENST00000324849 CCDC136Q96JN2 1154 aa23.33■■□□□ 1.33
VPS37A-201ENST00000324849 MYH16Q9H6N6 1097 aa23.33■■□□□ 1.32
VPS37A-201ENST00000324849 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.32
VPS37A-201ENST00000324849 CFDP1Q9UEE9 299 aaPredicted RBP23.32■■□□□ 1.32
VPS37A-201ENST00000324849 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
VPS37A-201ENST00000324849 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
VPS37A-201ENST00000324849 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
VPS37A-201ENST00000324849 EEA1Q15075 1411 aa23.24■■□□□ 1.31
VPS37A-201ENST00000324849 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
VPS37A-201ENST00000324849 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
VPS37A-201ENST00000324849 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
VPS37A-201ENST00000324849 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
VPS37A-201ENST00000324849 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
VPS37A-201ENST00000324849 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.29
VPS37A-201ENST00000324849 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
VPS37A-201ENST00000324849 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
VPS37A-201ENST00000324849 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
VPS37A-201ENST00000324849 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
VPS37A-201ENST00000324849 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
VPS37A-201ENST00000324849 ARXQ96QS3 562 aa23.09■■□□□ 1.29
VPS37A-201ENST00000324849 POGKQ9P215 609 aa23.09■■□□□ 1.29
VPS37A-201ENST00000324849 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
VPS37A-201ENST00000324849 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
VPS37A-201ENST00000324849 CARD11Q9BXL7 1154 aa23.05■■□□□ 1.28
VPS37A-201ENST00000324849 CDK11BP21127 795 aaKnown RBP23.03■■□□□ 1.28
VPS37A-201ENST00000324849 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
VPS37A-201ENST00000324849 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
VPS37A-201ENST00000324849 HDGFP51858 240 aaKnown RBP22.99■■□□□ 1.27
VPS37A-201ENST00000324849 NACADO15069 1562 aa22.99■■□□□ 1.27
VPS37A-201ENST00000324849 MAPK8IP3Q9UPT6 1336 aa22.97■■□□□ 1.27
VPS37A-201ENST00000324849 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
VPS37A-201ENST00000324849 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
VPS37A-201ENST00000324849 NPHP1O15259 732 aa22.89■■□□□ 1.25
VPS37A-201ENST00000324849 MIER1Q8N108 512 aa22.89■■□□□ 1.25
VPS37A-201ENST00000324849 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.25
VPS37A-201ENST00000324849 NCLP19338 710 aaKnown RBP22.88■■□□□ 1.25
VPS37A-201ENST00000324849 FTSJ3Q8IY81 847 aaKnown RBP22.88■■□□□ 1.25
VPS37A-201ENST00000324849 NEUROD2Q15784 382 aa22.87■■□□□ 1.25
VPS37A-201ENST00000324849 MLECQ14165 292 aa22.87■■□□□ 1.25
VPS37A-201ENST00000324849 BECN1Q14457 450 aa22.87■■□□□ 1.25
VPS37A-201ENST00000324849 KANK1Q14678 1352 aa22.87■■□□□ 1.25
VPS37A-201ENST00000324849 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
VPS37A-201ENST00000324849 EIF5BO60841 1220 aaKnown RBP22.85■■□□□ 1.25
VPS37A-201ENST00000324849 LAS1LQ9Y4W2 734 aaKnown RBP22.85■■□□□ 1.25
VPS37A-201ENST00000324849 CASC1Q6TDU7 716 aa22.82■■□□□ 1.24
VPS37A-201ENST00000324849 PNNQ9H307 717 aaKnown RBP22.81■■□□□ 1.24
VPS37A-201ENST00000324849 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
VPS37A-201ENST00000324849 CHMP4BQ9H444 224 aaKnown RBP22.8■■□□□ 1.24
VPS37A-201ENST00000324849 GOLGA6L22H0YM25 854 aa22.8■■□□□ 1.24
VPS37A-201ENST00000324849 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
VPS37A-201ENST00000324849 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
VPS37A-201ENST00000324849 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.24
VPS37A-201ENST00000324849 DDRGK1Q96HY6 314 aa22.76■■□□□ 1.23
VPS37A-201ENST00000324849 TMF1P82094 1093 aa22.75■■□□□ 1.23
VPS37A-201ENST00000324849 NBR1Q14596 966 aa22.75■■□□□ 1.23
VPS37A-201ENST00000324849 ZRSR1Q15695 479 aaKnown RBP22.75■■□□□ 1.23
VPS37A-201ENST00000324849 ANP32EQ9BTT0 268 aa22.74■■□□□ 1.23
VPS37A-201ENST00000324849 GGT6Q6P531 493 aa22.74■■□□□ 1.23
VPS37A-201ENST00000324849 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
VPS37A-201ENST00000324849 MS4A1P11836 297 aa22.73■■□□□ 1.23
VPS37A-201ENST00000324849 SRPK2P78362 688 aaKnown RBP22.72■■□□□ 1.23
VPS37A-201ENST00000324849 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
VPS37A-201ENST00000324849 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
VPS37A-201ENST00000324849 CUX2O14529 1486 aa22.7■■□□□ 1.22
VPS37A-201ENST00000324849 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
VPS37A-201ENST00000324849 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
VPS37A-201ENST00000324849 FRAT1Q92837 279 aaPredicted RBP22.67■■□□□ 1.22
VPS37A-201ENST00000324849 CARMIL2Q6F5E8 1435 aa22.66■■□□□ 1.22
VPS37A-201ENST00000324849 CC2D1BQ5T0F9 858 aaKnown RBP22.66■■□□□ 1.22
VPS37A-201ENST00000324849 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
VPS37A-201ENST00000324849 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
VPS37A-201ENST00000324849 SOX12O15370 315 aa22.65■■□□□ 1.22
VPS37A-201ENST00000324849 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
VPS37A-201ENST00000324849 FGD1P98174 961 aa22.61■■□□□ 1.21
VPS37A-201ENST00000324849 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
VPS37A-201ENST00000324849 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
VPS37A-201ENST00000324849 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
VPS37A-201ENST00000324849 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
VPS37A-201ENST00000324849 TRIM44Q96DX7 344 aaPredicted RBP22.57■■□□□ 1.2
VPS37A-201ENST00000324849 KCNJ4P48050 445 aa22.57■■□□□ 1.2
VPS37A-201ENST00000324849 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
VPS37A-201ENST00000324849 HDGFL2Q7Z4V5 671 aaPredicted RBP22.56■■□□□ 1.2
VPS37A-201ENST00000324849 RTF1Q92541 710 aaKnown RBP22.55■■□□□ 1.2
VPS37A-201ENST00000324849 STK26Q9P289 416 aa22.55■■□□□ 1.2
VPS37A-201ENST00000324849 PKD2Q13563 968 aa22.52■■□□□ 1.2
VPS37A-201ENST00000324849 TULP1O00294 542 aaPredicted RBP22.52■■□□□ 1.2
VPS37A-201ENST00000324849 RGS3P49796 1198 aa22.52■■□□□ 1.2
VPS37A-201ENST00000324849 GLIPR1L2Q4G1C9 344 aa22.5■■□□□ 1.19
VPS37A-201ENST00000324849 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
VPS37A-201ENST00000324849 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
VPS37A-201ENST00000324849 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
VPS37A-201ENST00000324849 PTMAP06454 111 aaKnown RBP22.48■■□□□ 1.19
VPS37A-201ENST00000324849 CSB-PGBD3P0DP91 1061 aa22.48■■□□□ 1.19
VPS37A-201ENST00000324849 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
VPS37A-201ENST00000324849 TAOK2Q9UL54 1235 aa22.45■■□□□ 1.18
VPS37A-201ENST00000324849 SOGA1O94964 1423 aa22.45■■□□□ 1.18
VPS37A-201ENST00000324849 NAP1L2Q9ULW6 460 aaPredicted RBP22.44■■□□□ 1.18
VPS37A-201ENST00000324849 PPP4R2Q9NY27 417 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms