RNA–Protein interactions for RNA: ENST00000324022.14

GYPA-201, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-201ENST00000324022 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
GYPA-201ENST00000324022 PABPN1Q86U42 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
GYPA-201ENST00000324022 SLAIN1Q8ND83 568 aa7.54□□□□□ -1.2
GYPA-201ENST00000324022 MS4A3Q96HJ5 214 aa7.53□□□□□ -1.2
GYPA-201ENST00000324022 ATN1P54259 1190 aaPredicted RBP7.52□□□□□ -1.21
GYPA-201ENST00000324022 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
GYPA-201ENST00000324022 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
GYPA-201ENST00000324022 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
GYPA-201ENST00000324022 RNF166Q96A37 237 aaPredicted RBP7.44□□□□□ -1.22
GYPA-201ENST00000324022 SEC24BO95487 1268 aa7.43□□□□□ -1.22
GYPA-201ENST00000324022 SNPHO15079 494 aa7.41□□□□□ -1.22
GYPA-201ENST00000324022 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.22
GYPA-201ENST00000324022 CREBZFQ9NS37 354 aa7.39□□□□□ -1.23
GYPA-201ENST00000324022 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
GYPA-201ENST00000324022 EMP3P54852 163 aa7.36□□□□□ -1.23
GYPA-201ENST00000324022 HS3ST6Q96QI5 342 aa7.35□□□□□ -1.23
GYPA-201ENST00000324022 BMP2KQ9NSY1 1161 aaPredicted RBP7.34□□□□□ -1.23
GYPA-201ENST00000324022 POTEB3A0JP26 581 aa7.3□□□□□ -1.24
GYPA-201ENST00000324022 POTEBQ6S5H4 581 aa7.3□□□□□ -1.24
GYPA-201ENST00000324022 FAM205CA6NFA0 338 aa7.29□□□□□ -1.24
GYPA-201ENST00000324022 NPM1P06748 294 aaKnown RBP eCLIP7.28□□□□□ -1.24
GYPA-201ENST00000324022 MYT1LQ9UL68 1186 aa7.27□□□□□ -1.25
GYPA-201ENST00000324022 TIE1P35590 1138 aa7.25□□□□□ -1.25
GYPA-201ENST00000324022 IER5LQ5T953 404 aa7.25□□□□□ -1.25
GYPA-201ENST00000324022 KCNA4P22459 653 aa7.23□□□□□ -1.25
GYPA-201ENST00000324022 TRPC6Q9Y210 931 aa7.19□□□□□ -1.26
GYPA-201ENST00000324022 FOXD4L1Q9NU39 408 aa7.18□□□□□ -1.26
GYPA-201ENST00000324022 TTLL13PA6NNM8 815 aa7.16□□□□□ -1.26
GYPA-201ENST00000324022 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.14□□□□□ -1.27
GYPA-201ENST00000324022 PLA2G2EQ9NZK7 142 aa7.14□□□□□ -1.27
GYPA-201ENST00000324022 KIF12Q96FN5 646 aa7.13□□□□□ -1.27
GYPA-201ENST00000324022 STAG3Q9UJ98 1225 aa7.13□□□□□ -1.27
GYPA-201ENST00000324022 TRIM35Q9UPQ4 493 aa7.13□□□□□ -1.27
GYPA-201ENST00000324022 PLCG2P16885 1265 aa7.11□□□□□ -1.27
GYPA-201ENST00000324022 ATXN8OSP0DMR3 200 aa7.1□□□□□ -1.27
GYPA-201ENST00000324022 PTGER2P43116 358 aa7.1□□□□□ -1.27
GYPA-201ENST00000324022 MNX1P50219 401 aaPredicted RBP7.1□□□□□ -1.27
GYPA-201ENST00000324022 CCDC61Q9Y6R9 512 aa7.09□□□□□ -1.27
GYPA-201ENST00000324022 TSPYL2Q9H2G4 693 aaPredicted RBP7.07□□□□□ -1.28
GYPA-201ENST00000324022 IRX2Q9BZI1 471 aaPredicted RBP7.05□□□□□ -1.28
GYPA-201ENST00000324022 MAP3K13O43283 966 aa7.02□□□□□ -1.29
GYPA-201ENST00000324022 IRX5P78411 483 aaPredicted RBP6.98□□□□□ -1.29
GYPA-201ENST00000324022 ERBB3P21860 1342 aa6.96□□□□□ -1.3
GYPA-201ENST00000324022 OCEL1Q9H607 264 aa6.92□□□□□ -1.3
GYPA-201ENST00000324022 RGS20O76081 388 aa6.91□□□□□ -1.3
GYPA-201ENST00000324022 C3orf67Q6ZVT6 689 aa6.9□□□□□ -1.3
GYPA-201ENST00000324022 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
GYPA-201ENST00000324022 HCSTQ9UBK5 93 aa6.88□□□□□ -1.31
GYPA-201ENST00000324022 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
GYPA-201ENST00000324022 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
GYPA-201ENST00000324022 SGIP1Q9BQI5 828 aa6.85□□□□□ -1.31
GYPA-201ENST00000324022 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
GYPA-201ENST00000324022 ZNF687Q8N1G0 1237 aa6.84□□□□□ -1.31
GYPA-201ENST00000324022 TMEM106CQ9BVX2 250 aa6.83□□□□□ -1.32
GYPA-201ENST00000324022 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
GYPA-201ENST00000324022 Q6ZNB5 142 aa6.81□□□□□ -1.32
GYPA-201ENST00000324022 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
GYPA-201ENST00000324022 PCDHB13Q9Y5F0 798 aa6.8□□□□□ -1.32
GYPA-201ENST00000324022 HOXB3P14651 431 aaPredicted RBP6.78□□□□□ -1.32
GYPA-201ENST00000324022 L3MBTL3Q96JM7 780 aaPredicted RBP6.75□□□□□ -1.33
GYPA-201ENST00000324022 DOK7Q18PE1 504 aa6.71□□□□□ -1.34
GYPA-201ENST00000324022 IFNL1Q8IU54 200 aa6.7□□□□□ -1.34
GYPA-201ENST00000324022 LSM11P83369 360 aaKnown RBP eCLIP6.68□□□□□ -1.34
GYPA-201ENST00000324022 RIMBP2O15034 1052 aa6.66□□□□□ -1.34
GYPA-201ENST00000324022 PDCD7Q8N8D1 485 aaKnown RBP6.66□□□□□ -1.34
GYPA-201ENST00000324022 RASEFQ8IZ41 740 aa6.64□□□□□ -1.35
GYPA-201ENST00000324022 IFFO2Q5TF58 517 aa6.61□□□□□ -1.35
GYPA-201ENST00000324022 SLC4A1APQ9BWU0 796 aaKnown RBP6.61□□□□□ -1.35
GYPA-201ENST00000324022 ZBTB22O15209 634 aa6.59□□□□□ -1.35
GYPA-201ENST00000324022 A0A0G2JS52 829 aa6.58□□□□□ -1.36
GYPA-201ENST00000324022 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
GYPA-201ENST00000324022 ZSWIM6Q9HCJ5 1215 aa6.57□□□□□ -1.36
GYPA-201ENST00000324022 LCE2BO14633 110 aa6.55□□□□□ -1.36
GYPA-201ENST00000324022 ZNF775Q96BV0 537 aaPredicted RBP6.54□□□□□ -1.36
GYPA-201ENST00000324022 LAPTM4AQ15012 233 aa6.53□□□□□ -1.36
GYPA-201ENST00000324022 PBX2P40425 430 aa6.5□□□□□ -1.37
GYPA-201ENST00000324022 ZNF787Q6DD87 383 aa6.49□□□□□ -1.37
GYPA-201ENST00000324022 MKRN3Q13064 507 aaKnown RBP6.48□□□□□ -1.37
GYPA-201ENST00000324022 GPR153Q6NV75 609 aa6.48□□□□□ -1.37
GYPA-201ENST00000324022 G3V3G9 751 aa6.46□□□□□ -1.38
GYPA-201ENST00000324022 DCAF8Q5TAQ9 597 aa6.46□□□□□ -1.38
GYPA-201ENST00000324022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.46□□□□□ -1.38
GYPA-201ENST00000324022 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
GYPA-201ENST00000324022 GOLGA2Q08379 1002 aa6.45□□□□□ -1.38
GYPA-201ENST00000324022 ZNF316A6NFI3 1004 aaPredicted RBP6.44□□□□□ -1.38
GYPA-201ENST00000324022 SPDYE4A6NLX3 237 aa6.44□□□□□ -1.38
GYPA-201ENST00000324022 ADGRD1Q6QNK2 874 aa6.42□□□□□ -1.38
GYPA-201ENST00000324022 KCTD12Q96CX2 325 aaKnown RBP6.42□□□□□ -1.38
GYPA-201ENST00000324022 BOLA1Q9Y3E2 137 aa6.41□□□□□ -1.38
GYPA-201ENST00000324022 GFRA3O60609 400 aa6.37□□□□□ -1.39
GYPA-201ENST00000324022 POTEEQ6S8J3 1075 aa6.37□□□□□ -1.39
GYPA-201ENST00000324022 AXIN2Q9Y2T1 843 aa6.37□□□□□ -1.39
GYPA-201ENST00000324022 ARSIQ5FYB1 569 aa6.35□□□□□ -1.39
GYPA-201ENST00000324022 DPY19L2Q6NUT2 758 aa6.35□□□□□ -1.39
GYPA-201ENST00000324022 ILDR1Q86SU0 546 aaPredicted RBP6.35□□□□□ -1.39
GYPA-201ENST00000324022 PTPN5P54829 565 aa6.34□□□□□ -1.39
GYPA-201ENST00000324022 STK17AQ9UEE5 414 aa6.34□□□□□ -1.39
GYPA-201ENST00000324022 SUZ12Q15022 739 aaKnown RBP6.32□□□□□ -1.4
GYPA-201ENST00000324022 HRO43593 1189 aa6.31□□□□□ -1.4
GYPA-201ENST00000324022 FAM212AQ96EL1 285 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms