RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
MRE11-201ENST00000323929 CANXP27824 592 aaKnown RBP10.31□□□□□ -0.76
MRE11-201ENST00000323929 CARMIL2Q6F5E8 1435 aa10.3□□□□□ -0.76
MRE11-201ENST00000323929 CFDP1Q9UEE9 299 aaPredicted RBP10.29□□□□□ -0.76
MRE11-201ENST00000323929 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
MRE11-201ENST00000323929 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
MRE11-201ENST00000323929 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.77
MRE11-201ENST00000323929 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
MRE11-201ENST00000323929 RAPGEF2Q9Y4G8 1499 aa10.25□□□□□ -0.77
MRE11-201ENST00000323929 FMN1Q68DA7 1419 aa10.25□□□□□ -0.77
MRE11-201ENST00000323929 ARHGAP35Q9NRY4 1499 aa10.25□□□□□ -0.77
MRE11-201ENST00000323929 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
MRE11-201ENST00000323929 SLC24A1O60721 1099 aa10.21□□□□□ -0.78
MRE11-201ENST00000323929 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
MRE11-201ENST00000323929 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
MRE11-201ENST00000323929 KANK1Q14678 1352 aa10.2□□□□□ -0.78
MRE11-201ENST00000323929 PLPPR3Q6T4P5 718 aa10.19□□□□□ -0.78
MRE11-201ENST00000323929 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
MRE11-201ENST00000323929 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
MRE11-201ENST00000323929 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
MRE11-201ENST00000323929 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
MRE11-201ENST00000323929 DDX10Q13206 875 aaKnown RBP10.18□□□□□ -0.78
MRE11-201ENST00000323929 TDRD9Q8NDG6 1382 aaKnown RBP10.17□□□□□ -0.78
MRE11-201ENST00000323929 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
MRE11-201ENST00000323929 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.78
MRE11-201ENST00000323929 TMC1Q8TDI8 760 aa10.14□□□□□ -0.79
MRE11-201ENST00000323929 ARID4BQ4LE39 1312 aaPredicted RBP10.14□□□□□ -0.79
MRE11-201ENST00000323929 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
MRE11-201ENST00000323929 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
MRE11-201ENST00000323929 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
MRE11-201ENST00000323929 CCDC18Q5T9S5 1454 aa10.12□□□□□ -0.79
MRE11-201ENST00000323929 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
MRE11-201ENST00000323929 HMGXB3Q12766 1538 aa10.11□□□□□ -0.79
MRE11-201ENST00000323929 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
MRE11-201ENST00000323929 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
MRE11-201ENST00000323929 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
MRE11-201ENST00000323929 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
MRE11-201ENST00000323929 FHOD3Q2V2M9 1422 aa10.07□□□□□ -0.8
MRE11-201ENST00000323929 ANKRD30AQ9BXX3 1397 aa10.07□□□□□ -0.8
MRE11-201ENST00000323929 HDGFP51858 240 aaKnown RBP10.06□□□□□ -0.8
MRE11-201ENST00000323929 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
MRE11-201ENST00000323929 RGL3Q3MIN7 710 aa10.06□□□□□ -0.8
MRE11-201ENST00000323929 CFAP53Q96M91 514 aa10.06□□□□□ -0.8
MRE11-201ENST00000323929 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
MRE11-201ENST00000323929 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
MRE11-201ENST00000323929 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
MRE11-201ENST00000323929 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
MRE11-201ENST00000323929 KNSTRNQ9Y448 316 aa10.03□□□□□ -0.8
MRE11-201ENST00000323929 FKBP8Q14318 412 aa10.02□□□□□ -0.8
MRE11-201ENST00000323929 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.81
MRE11-201ENST00000323929 C14orf37Q86TY3 774 aa10.02□□□□□ -0.81
MRE11-201ENST00000323929 CFTRP13569 1480 aa10.02□□□□□ -0.81
MRE11-201ENST00000323929 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
MRE11-201ENST00000323929 KIF21BO75037 1637 aa10.01□□□□□ -0.81
MRE11-201ENST00000323929 POGKQ9P215 609 aa10□□□□□ -0.81
MRE11-201ENST00000323929 JPH4Q96JJ6 628 aa10□□□□□ -0.81
MRE11-201ENST00000323929 CUX1P39880 1505 aa10□□□□□ -0.81
MRE11-201ENST00000323929 UPF2Q9HAU5 1272 aaKnown RBP10□□□□□ -0.81
MRE11-201ENST00000323929 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
MRE11-201ENST00000323929 SCAF1Q9H7N4 1312 aaKnown RBP9.99□□□□□ -0.81
MRE11-201ENST00000323929 TMF1P82094 1093 aa9.99□□□□□ -0.81
MRE11-201ENST00000323929 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
MRE11-201ENST00000323929 MIER1Q8N108 512 aa9.98□□□□□ -0.81
MRE11-201ENST00000323929 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
MRE11-201ENST00000323929 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
MRE11-201ENST00000323929 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
MRE11-201ENST00000323929 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
MRE11-201ENST00000323929 GRIN2BQ13224 1484 aa9.97□□□□□ -0.81
MRE11-201ENST00000323929 PTPRGP23470 1445 aa9.97□□□□□ -0.81
MRE11-201ENST00000323929 IGF1RP08069 1367 aa9.97□□□□□ -0.81
MRE11-201ENST00000323929 RAB3GAP2Q9H2M9 1393 aa9.97□□□□□ -0.81
MRE11-201ENST00000323929 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
MRE11-201ENST00000323929 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
MRE11-201ENST00000323929 TOP2BQ02880 1626 aa9.96□□□□□ -0.81
MRE11-201ENST00000323929 BCL11AQ9H165 835 aa9.96□□□□□ -0.81
MRE11-201ENST00000323929 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.81
MRE11-201ENST00000323929 DCAF11Q8TEB1 546 aa9.96□□□□□ -0.82
MRE11-201ENST00000323929 PKD2Q13563 968 aa9.96□□□□□ -0.82
MRE11-201ENST00000323929 EIF3AQ14152 1382 aaKnown RBP9.95□□□□□ -0.82
MRE11-201ENST00000323929 PNNQ9H307 717 aaKnown RBP9.95□□□□□ -0.82
MRE11-201ENST00000323929 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
MRE11-201ENST00000323929 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
MRE11-201ENST00000323929 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
MRE11-201ENST00000323929 NUP155O75694 1391 aa9.94□□□□□ -0.82
MRE11-201ENST00000323929 MPHOSPH9Q99550 1183 aa9.94□□□□□ -0.82
MRE11-201ENST00000323929 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
MRE11-201ENST00000323929 SYNJ1O43426 1573 aa9.93□□□□□ -0.82
MRE11-201ENST00000323929 SPAG9O60271 1321 aaKnown RBP9.93□□□□□ -0.82
MRE11-201ENST00000323929 EFCAB5A4FU69 1503 aa9.93□□□□□ -0.82
MRE11-201ENST00000323929 MAPK8IP3Q9UPT6 1336 aa9.92□□□□□ -0.82
MRE11-201ENST00000323929 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
MRE11-201ENST00000323929 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
MRE11-201ENST00000323929 SENP3Q9H4L4 574 aaPredicted RBP9.91□□□□□ -0.82
MRE11-201ENST00000323929 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
MRE11-201ENST00000323929 GGT6Q6P531 493 aa9.91□□□□□ -0.82
MRE11-201ENST00000323929 ROCK2O75116 1388 aaKnown RBP9.91□□□□□ -0.82
MRE11-201ENST00000323929 NPM2Q86SE8 214 aaKnown RBP9.9□□□□□ -0.82
MRE11-201ENST00000323929 OSCARQ8IYS5 282 aa9.9□□□□□ -0.82
MRE11-201ENST00000323929 HNRNPMP52272 730 aaKnown RBP eCLIP9.9□□□□□ -0.82
MRE11-201ENST00000323929 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms