RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 KANK4Q5T7N3 995 aaPredicted RBP30.67■■■□□ 2.5
PDZD3-201ENST00000322712 ZEB1P37275 1124 aaPredicted RBP30.66■■■□□ 2.5
PDZD3-201ENST00000322712 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
PDZD3-201ENST00000322712 P3H3Q8IVL6 736 aa30.63■■■□□ 2.49
PDZD3-201ENST00000322712 CCER1Q8TC90 406 aaPredicted RBP30.58■■■□□ 2.49
PDZD3-201ENST00000322712 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
PDZD3-201ENST00000322712 HNRNPUL2Q1KMD3 747 aaKnown RBP30.55■■■□□ 2.48
PDZD3-201ENST00000322712 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
PDZD3-201ENST00000322712 CTTNBP2Q8WZ74 1663 aa30.51■■■□□ 2.47
PDZD3-201ENST00000322712 FHOD3Q2V2M9 1422 aa30.48■■■□□ 2.47
PDZD3-201ENST00000322712 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
PDZD3-201ENST00000322712 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
PDZD3-201ENST00000322712 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
PDZD3-201ENST00000322712 ATP1B4Q9UN42 357 aaPredicted RBP30.37■■■□□ 2.45
PDZD3-201ENST00000322712 PCF11O94913 1555 aaKnown RBP30.37■■■□□ 2.45
PDZD3-201ENST00000322712 EFCAB5A4FU69 1503 aa30.36■■■□□ 2.45
PDZD3-201ENST00000322712 TIAM1Q13009 1591 aa30.35■■■□□ 2.45
PDZD3-201ENST00000322712 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
PDZD3-201ENST00000322712 MAP3K1Q13233 1512 aa30.26■■■□□ 2.43
PDZD3-201ENST00000322712 LRRC9Q6ZRR7 1453 aa30.24■■■□□ 2.43
PDZD3-201ENST00000322712 SAMD9Q5K651 1589 aa30.23■■■□□ 2.43
PDZD3-201ENST00000322712 RRBP1Q9P2E9 1410 aaKnown RBP30.23■■■□□ 2.43
PDZD3-201ENST00000322712 FBLN2P98095 1184 aa30.2■■■□□ 2.43
PDZD3-201ENST00000322712 CASKIN1Q8WXD9 1431 aa30.2■■■□□ 2.43
PDZD3-201ENST00000322712 GRIN2AQ12879 1464 aa30.2■■■□□ 2.42
PDZD3-201ENST00000322712 FYCO1Q9BQS8 1478 aa30.2■■■□□ 2.42
PDZD3-201ENST00000322712 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
PDZD3-201ENST00000322712 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
PDZD3-201ENST00000322712 CFAP43Q8NDM7 1665 aa30.18■■■□□ 2.42
PDZD3-201ENST00000322712 FMN1Q68DA7 1419 aa30.17■■■□□ 2.42
PDZD3-201ENST00000322712 CCNB3Q8WWL7 1395 aa30.16■■■□□ 2.42
PDZD3-201ENST00000322712 IQGAP2Q13576 1575 aa30.12■■■□□ 2.41
PDZD3-201ENST00000322712 PHLDB1Q86UU1 1377 aa30.11■■■□□ 2.41
PDZD3-201ENST00000322712 ITGAEP38570 1179 aa30.1■■■□□ 2.41
PDZD3-201ENST00000322712 LRRIQ1Q96JM4 1722 aa30.04■■■□□ 2.4
PDZD3-201ENST00000322712 KIAA0586Q9BVV6 1533 aa30.02■■■□□ 2.4
PDZD3-201ENST00000322712 CEP170Q5SW79 1584 aa30.02■■■□□ 2.4
PDZD3-201ENST00000322712 FAM50AQ14320 339 aaKnown RBP29.94■■■□□ 2.38
PDZD3-201ENST00000322712 NUP160Q12769 1436 aa29.93■■■□□ 2.38
PDZD3-201ENST00000322712 UGGT2Q9NYU1 1516 aa29.92■■■□□ 2.38
PDZD3-201ENST00000322712 CHD1O14646 1710 aa29.92■■■□□ 2.38
PDZD3-201ENST00000322712 MTUS2Q5JR59 1369 aa29.91■■■□□ 2.38
PDZD3-201ENST00000322712 ARID3CA6NKF2 412 aa29.87■■■□□ 2.37
PDZD3-201ENST00000322712 DISP1Q96F81 1524 aa29.85■■■□□ 2.37
PDZD3-201ENST00000322712 DHX57Q6P158 1386 aaKnown RBP29.85■■■□□ 2.37
PDZD3-201ENST00000322712 MAGI3Q5TCQ9 1506 aa29.81■■■□□ 2.36
PDZD3-201ENST00000322712 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
PDZD3-201ENST00000322712 JPH4Q96JJ6 628 aa29.78■■■□□ 2.36
PDZD3-201ENST00000322712 HECW1Q76N89 1606 aa29.77■■■□□ 2.36
PDZD3-201ENST00000322712 NCOA2Q15596 1464 aa29.76■■■□□ 2.36
PDZD3-201ENST00000322712 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.35
PDZD3-201ENST00000322712 EPRSP07814 1512 aaKnown RBP29.76■■■□□ 2.35
PDZD3-201ENST00000322712 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
PDZD3-201ENST00000322712 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
PDZD3-201ENST00000322712 CCDC18Q5T9S5 1454 aa29.73■■■□□ 2.35
PDZD3-201ENST00000322712 EHBP1L1Q8N3D4 1523 aa29.71■■■□□ 2.35
PDZD3-201ENST00000322712 SUPT6HQ7KZ85 1726 aaKnown RBP29.69■■■□□ 2.34
PDZD3-201ENST00000322712 CARMIL2Q6F5E8 1435 aa29.67■■■□□ 2.34
PDZD3-201ENST00000322712 SETD5Q9C0A6 1442 aa29.67■■■□□ 2.34
PDZD3-201ENST00000322712 MYOM3Q5VTT5 1437 aa29.65■■■□□ 2.34
PDZD3-201ENST00000322712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
PDZD3-201ENST00000322712 CLSPNQ9HAW4 1339 aa29.62■■■□□ 2.33
PDZD3-201ENST00000322712 NUP153P49790 1475 aaKnown RBP29.61■■■□□ 2.33
PDZD3-201ENST00000322712 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
PDZD3-201ENST00000322712 PRG4Q92954 1404 aaPredicted RBP29.59■■■□□ 2.33
PDZD3-201ENST00000322712 RAPGEF6Q8TEU7 1601 aa29.58■■■□□ 2.33
PDZD3-201ENST00000322712 PTPRKQ15262 1439 aa29.58■■■□□ 2.33
PDZD3-201ENST00000322712 PLB1Q6P1J6 1458 aa29.56■■■□□ 2.32
PDZD3-201ENST00000322712 SHROOM2Q13796 1616 aa29.52■■■□□ 2.32
PDZD3-201ENST00000322712 PTPN23Q9H3S7 1636 aa29.52■■■□□ 2.32
PDZD3-201ENST00000322712 ZNF316A6NFI3 1004 aaPredicted RBP29.49■■■□□ 2.31
PDZD3-201ENST00000322712 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
PDZD3-201ENST00000322712 MAPKBP1O60336 1514 aa29.48■■■□□ 2.31
PDZD3-201ENST00000322712 DIEXFQ68CQ4 756 aaKnown RBP29.45■■■□□ 2.31
PDZD3-201ENST00000322712 ERCC6L2Q5T890 1561 aa29.42■■■□□ 2.3
PDZD3-201ENST00000322712 PTPRGP23470 1445 aa29.39■■■□□ 2.3
PDZD3-201ENST00000322712 TCOF1Q13428 1488 aaKnown RBP29.39■■■□□ 2.3
PDZD3-201ENST00000322712 CHIC2Q9UKJ5 165 aa29.39■■■□□ 2.29
PDZD3-201ENST00000322712 CDK11AQ9UQ88 783 aaPredicted RBP29.37■■■□□ 2.29
PDZD3-201ENST00000322712 HFM1A2PYH4 1435 aa29.37■■■□□ 2.29
PDZD3-201ENST00000322712 ABCA8O94911 1581 aa29.35■■■□□ 2.29
PDZD3-201ENST00000322712 NAIPQ13075 1403 aa29.34■■■□□ 2.29
PDZD3-201ENST00000322712 MIA2Q96PC5 1412 aa29.34■■■□□ 2.29
PDZD3-201ENST00000322712 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
PDZD3-201ENST00000322712 RRP7BPQ9NSQ0 103 aa29.33■■■□□ 2.29
PDZD3-201ENST00000322712 ZNF644Q9H582 1327 aaPredicted RBP29.32■■■□□ 2.28
PDZD3-201ENST00000322712 TROQ12816 1431 aaPredicted RBP29.31■■■□□ 2.28
PDZD3-201ENST00000322712 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
PDZD3-201ENST00000322712 NEUROD1Q13562 356 aa29.28■■■□□ 2.28
PDZD3-201ENST00000322712 KIF14Q15058 1648 aa29.27■■■□□ 2.28
PDZD3-201ENST00000322712 ATP10BO94823 1461 aa29.24■■■□□ 2.27
PDZD3-201ENST00000322712 UACAQ9BZF9 1416 aa29.21■■■□□ 2.27
PDZD3-201ENST00000322712 PLEKHD1A6NEE1 506 aa29.17■■■□□ 2.26
PDZD3-201ENST00000322712 CFDP1Q9UEE9 299 aaPredicted RBP29.17■■■□□ 2.26
PDZD3-201ENST00000322712 KDM6BO15054 1643 aa29.17■■■□□ 2.26
PDZD3-201ENST00000322712 GPATCH8Q9UKJ3 1502 aaKnown RBP29.16■■■□□ 2.26
PDZD3-201ENST00000322712 DAPK1P53355 1430 aa29.16■■■□□ 2.26
PDZD3-201ENST00000322712 ADCY10Q96PN6 1610 aa29.15■■■□□ 2.26
PDZD3-201ENST00000322712 ABCC5O15440 1437 aa29.15■■■□□ 2.26
PDZD3-201ENST00000322712 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms