RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 CEP162Q5TB80 1403 aa15.06■□□□□ 0
SF3B2-201ENST00000322535 ERCC6Q03468 1493 aa15.06■□□□□ 0
SF3B2-201ENST00000322535 GOLGA3Q08378 1498 aa15.05■□□□□ -0
SF3B2-201ENST00000322535 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
SF3B2-201ENST00000322535 IGF1RP08069 1367 aa15.02□□□□□ -0.01
SF3B2-201ENST00000322535 ZNF316A6NFI3 1004 aaPredicted RBP15.02□□□□□ -0.01
SF3B2-201ENST00000322535 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
SF3B2-201ENST00000322535 PKNOX2Q96KN3 472 aa15□□□□□ -0.01
SF3B2-201ENST00000322535 P3H3Q8IVL6 736 aa14.99□□□□□ -0.01
SF3B2-201ENST00000322535 PODXL2Q9NZ53 605 aa14.99□□□□□ -0.01
SF3B2-201ENST00000322535 BCANQ96GW7 911 aa14.96□□□□□ -0.01
SF3B2-201ENST00000322535 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
SF3B2-201ENST00000322535 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.027e-8■■■□□ 18.7
SF3B2-201ENST00000322535 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-201ENST00000322535 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
SF3B2-201ENST00000322535 CLIP1P30622 1438 aa14.93□□□□□ -0.02
SF3B2-201ENST00000322535 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
SF3B2-201ENST00000322535 KIF21BO75037 1637 aa14.92□□□□□ -0.02
SF3B2-201ENST00000322535 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
SF3B2-201ENST00000322535 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
SF3B2-201ENST00000322535 FBLN2P98095 1184 aa14.89□□□□□ -0.03
SF3B2-201ENST00000322535 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-201ENST00000322535 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
SF3B2-201ENST00000322535 MSH5O43196 834 aa14.86□□□□□ -0.03
SF3B2-201ENST00000322535 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
SF3B2-201ENST00000322535 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
SF3B2-201ENST00000322535 RBM19Q9Y4C8 960 aaKnown RBP14.79□□□□□ -0.04
SF3B2-201ENST00000322535 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
SF3B2-201ENST00000322535 WDR62O43379 1518 aa14.76□□□□□ -0.05
SF3B2-201ENST00000322535 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
SF3B2-201ENST00000322535 ERICH6BQ5W0A0 696 aa14.76□□□□□ -0.05
SF3B2-201ENST00000322535 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
SF3B2-201ENST00000322535 THOC2Q8NI27 1593 aaKnown RBP14.75□□□□□ -0.05
SF3B2-201ENST00000322535 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
SF3B2-201ENST00000322535 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
SF3B2-201ENST00000322535 ARHGAP35Q9NRY4 1499 aa14.73□□□□□ -0.05
SF3B2-201ENST00000322535 KANK4Q5T7N3 995 aaPredicted RBP14.72□□□□□ -0.05
SF3B2-201ENST00000322535 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
SF3B2-201ENST00000322535 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
SF3B2-201ENST00000322535 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.06
SF3B2-201ENST00000322535 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.06
SF3B2-201ENST00000322535 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
SF3B2-201ENST00000322535 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
SF3B2-201ENST00000322535 ITGAEP38570 1179 aa14.69□□□□□ -0.06
SF3B2-201ENST00000322535 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
SF3B2-201ENST00000322535 FKBP8Q14318 412 aa14.67□□□□□ -0.06
SF3B2-201ENST00000322535 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
SF3B2-201ENST00000322535 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
SF3B2-201ENST00000322535 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
SF3B2-201ENST00000322535 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
SF3B2-201ENST00000322535 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
SF3B2-201ENST00000322535 CUL7Q14999 1698 aa14.63□□□□□ -0.07
SF3B2-201ENST00000322535 FHAD1B1AJZ9 1412 aa14.62□□□□□ -0.07
SF3B2-201ENST00000322535 MYT1LQ9UL68 1186 aa14.6□□□□□ -0.07
SF3B2-201ENST00000322535 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
SF3B2-201ENST00000322535 AEBP2Q6ZN18 517 aaPredicted RBP14.55□□□□□ -0.08
SF3B2-201ENST00000322535 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
SF3B2-201ENST00000322535 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
SF3B2-201ENST00000322535 NBR1Q14596 966 aa14.51□□□□□ -0.09
SF3B2-201ENST00000322535 KCNH8Q96L42 1107 aa14.49□□□□□ -0.09
SF3B2-201ENST00000322535 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
SF3B2-201ENST00000322535 NEFLP07196 543 aa14.48□□□□□ -0.09
SF3B2-201ENST00000322535 PCF11O94913 1555 aaKnown RBP14.48□□□□□ -0.09
SF3B2-201ENST00000322535 SYNJ2O15056 1496 aa14.48□□□□□ -0.09
SF3B2-201ENST00000322535 IQGAP2Q13576 1575 aa14.46□□□□□ -0.09
SF3B2-201ENST00000322535 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.1
SF3B2-201ENST00000322535 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
SF3B2-201ENST00000322535 ZMYND15Q9H091 742 aa14.45□□□□□ -0.1
SF3B2-201ENST00000322535 A0A0U1RQG5 324 aaPredicted RBP14.44□□□□□ -0.1
SF3B2-201ENST00000322535 FAM50AQ14320 339 aaKnown RBP14.44□□□□□ -0.1
SF3B2-201ENST00000322535 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
SF3B2-201ENST00000322535 KIAA0586Q9BVV6 1533 aa14.42□□□□□ -0.1
SF3B2-201ENST00000322535 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
SF3B2-201ENST00000322535 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
SF3B2-201ENST00000322535 EFCAB5A4FU69 1503 aa14.4□□□□□ -0.1
SF3B2-201ENST00000322535 PHLDB1Q86UU1 1377 aa14.39□□□□□ -0.11
SF3B2-201ENST00000322535 PDE4CQ08493 712 aa14.38□□□□□ -0.11
SF3B2-201ENST00000322535 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
SF3B2-201ENST00000322535 DISP1Q96F81 1524 aa14.38□□□□□ -0.11
SF3B2-201ENST00000322535 SAMD9Q5K651 1589 aa14.38□□□□□ -0.11
SF3B2-201ENST00000322535 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
SF3B2-201ENST00000322535 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
SF3B2-201ENST00000322535 LRRC9Q6ZRR7 1453 aa14.37□□□□□ -0.11
SF3B2-201ENST00000322535 CDK13Q14004 1512 aaKnown RBP14.36□□□□□ -0.11
SF3B2-201ENST00000322535 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
SF3B2-201ENST00000322535 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
SF3B2-201ENST00000322535 CHD1O14646 1710 aa14.35□□□□□ -0.11
SF3B2-201ENST00000322535 NUP160Q12769 1436 aa14.34□□□□□ -0.11
SF3B2-201ENST00000322535 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.11
SF3B2-201ENST00000322535 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.11
SF3B2-201ENST00000322535 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
SF3B2-201ENST00000322535 CDK11AQ9UQ88 783 aaPredicted RBP14.32□□□□□ -0.12
SF3B2-201ENST00000322535 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
SF3B2-201ENST00000322535 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
SF3B2-201ENST00000322535 FGD1P98174 961 aa14.31□□□□□ -0.12
SF3B2-201ENST00000322535 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
SF3B2-201ENST00000322535 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
SF3B2-201ENST00000322535 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
SF3B2-201ENST00000322535 TRIM52Q96A61 297 aa14.3□□□□□ -0.12
SF3B2-201ENST00000322535 BCL11BQ9C0K0 894 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms