RNA–Protein interactions for RNA: ENST00000322088.10

PPP2R1A-201, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP2R1A, Length 5,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-201ENST00000322088 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
PPP2R1A-201ENST00000322088 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
PPP2R1A-201ENST00000322088 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
PPP2R1A-201ENST00000322088 KDM2AQ9Y2K7 1162 aa18.66■□□□□ 0.58
PPP2R1A-201ENST00000322088 MIER1Q8N108 512 aa18.65■□□□□ 0.58
PPP2R1A-201ENST00000322088 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
PPP2R1A-201ENST00000322088 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
PPP2R1A-201ENST00000322088 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
PPP2R1A-201ENST00000322088 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
PPP2R1A-201ENST00000322088 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
PPP2R1A-201ENST00000322088 KCNH8Q96L42 1107 aa18.58■□□□□ 0.57
PPP2R1A-201ENST00000322088 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
PPP2R1A-201ENST00000322088 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
PPP2R1A-201ENST00000322088 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
PPP2R1A-201ENST00000322088 CCDC136Q96JN2 1154 aa18.52■□□□□ 0.56
PPP2R1A-201ENST00000322088 ANP32BQ92688 251 aaKnown RBP18.52■□□□□ 0.56
PPP2R1A-201ENST00000322088 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
PPP2R1A-201ENST00000322088 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
PPP2R1A-201ENST00000322088 NBR1Q14596 966 aa18.5■□□□□ 0.55
PPP2R1A-201ENST00000322088 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
PPP2R1A-201ENST00000322088 PPP1R15AO75807 674 aaPredicted RBP18.48■□□□□ 0.55
PPP2R1A-201ENST00000322088 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
PPP2R1A-201ENST00000322088 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
PPP2R1A-201ENST00000322088 CUX2O14529 1486 aa18.46■□□□□ 0.55
PPP2R1A-201ENST00000322088 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
PPP2R1A-201ENST00000322088 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
PPP2R1A-201ENST00000322088 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
PPP2R1A-201ENST00000322088 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
PPP2R1A-201ENST00000322088 DDRGK1Q96HY6 314 aa18.41■□□□□ 0.54
PPP2R1A-201ENST00000322088 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
PPP2R1A-201ENST00000322088 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
PPP2R1A-201ENST00000322088 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
PPP2R1A-201ENST00000322088 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
PPP2R1A-201ENST00000322088 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
PPP2R1A-201ENST00000322088 SUPT16HQ9Y5B9 1047 aaKnown RBP18.37■□□□□ 0.53
PPP2R1A-201ENST00000322088 CARD11Q9BXL7 1154 aa18.37■□□□□ 0.53
PPP2R1A-201ENST00000322088 SOGA1O94964 1423 aa18.37■□□□□ 0.53
PPP2R1A-201ENST00000322088 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
PPP2R1A-201ENST00000322088 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
PPP2R1A-201ENST00000322088 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
PPP2R1A-201ENST00000322088 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
PPP2R1A-201ENST00000322088 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
PPP2R1A-201ENST00000322088 PPM1GO15355 546 aaPredicted RBP18.3■□□□□ 0.52
PPP2R1A-201ENST00000322088 ARID4BQ4LE39 1312 aaPredicted RBP18.29■□□□□ 0.52
PPP2R1A-201ENST00000322088 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
PPP2R1A-201ENST00000322088 KANK1Q14678 1352 aa18.28■□□□□ 0.52
PPP2R1A-201ENST00000322088 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.51
PPP2R1A-201ENST00000322088 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
PPP2R1A-201ENST00000322088 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
PPP2R1A-201ENST00000322088 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
PPP2R1A-201ENST00000322088 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
PPP2R1A-201ENST00000322088 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
PPP2R1A-201ENST00000322088 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
PPP2R1A-201ENST00000322088 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
PPP2R1A-201ENST00000322088 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
PPP2R1A-201ENST00000322088 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
PPP2R1A-201ENST00000322088 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
PPP2R1A-201ENST00000322088 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
PPP2R1A-201ENST00000322088 POGKQ9P215 609 aa18.19■□□□□ 0.5
PPP2R1A-201ENST00000322088 ZBTB7CA1YPR0 619 aa18.19■□□□□ 0.5
PPP2R1A-201ENST00000322088 BECN1Q14457 450 aa18.18■□□□□ 0.5
PPP2R1A-201ENST00000322088 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
PPP2R1A-201ENST00000322088 TMF1P82094 1093 aa18.16■□□□□ 0.5
PPP2R1A-201ENST00000322088 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
PPP2R1A-201ENST00000322088 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.5
PPP2R1A-201ENST00000322088 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
PPP2R1A-201ENST00000322088 WIZO95785 1651 aa18.13■□□□□ 0.49
PPP2R1A-201ENST00000322088 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
PPP2R1A-201ENST00000322088 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
PPP2R1A-201ENST00000322088 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
PPP2R1A-201ENST00000322088 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
PPP2R1A-201ENST00000322088 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
PPP2R1A-201ENST00000322088 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
PPP2R1A-201ENST00000322088 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
PPP2R1A-201ENST00000322088 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
PPP2R1A-201ENST00000322088 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.49
PPP2R1A-201ENST00000322088 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
PPP2R1A-201ENST00000322088 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
PPP2R1A-201ENST00000322088 MS4A1P11836 297 aa18.08■□□□□ 0.48
PPP2R1A-201ENST00000322088 A0A0G2JS52 829 aa18.08■□□□□ 0.48
PPP2R1A-201ENST00000322088 TRIM44Q96DX7 344 aaPredicted RBP18.07■□□□□ 0.48
PPP2R1A-201ENST00000322088 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
PPP2R1A-201ENST00000322088 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
PPP2R1A-201ENST00000322088 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
PPP2R1A-201ENST00000322088 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
PPP2R1A-201ENST00000322088 CC2D1BQ5T0F9 858 aaKnown RBP18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 PLEKHG5O94827 1062 aa18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 PKD2Q13563 968 aa18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
PPP2R1A-201ENST00000322088 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.48
PPP2R1A-201ENST00000322088 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
PPP2R1A-201ENST00000322088 GOLGA6L22H0YM25 854 aa18■□□□□ 0.47
PPP2R1A-201ENST00000322088 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
PPP2R1A-201ENST00000322088 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
PPP2R1A-201ENST00000322088 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
PPP2R1A-201ENST00000322088 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
PPP2R1A-201ENST00000322088 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PPP2R1A-201ENST00000322088 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms