RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LCLAT1-202ENST00000319406 CUL7Q14999 1698 aa15.05■□□□□ -0
LCLAT1-202ENST00000319406 TIAM1Q13009 1591 aa15.04■□□□□ -0
LCLAT1-202ENST00000319406 MIER1Q8N108 512 aa15.04■□□□□ -0
LCLAT1-202ENST00000319406 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
LCLAT1-202ENST00000319406 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
LCLAT1-202ENST00000319406 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
LCLAT1-202ENST00000319406 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
LCLAT1-202ENST00000319406 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
LCLAT1-202ENST00000319406 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
LCLAT1-202ENST00000319406 PCF11O94913 1555 aaKnown RBP14.97□□□□□ -0.01
LCLAT1-202ENST00000319406 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
LCLAT1-202ENST00000319406 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
LCLAT1-202ENST00000319406 LRRC9Q6ZRR7 1453 aa14.97□□□□□ -0.01
LCLAT1-202ENST00000319406 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
LCLAT1-202ENST00000319406 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.02
LCLAT1-202ENST00000319406 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
LCLAT1-202ENST00000319406 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
LCLAT1-202ENST00000319406 BCL11AQ9H165 835 aa14.92□□□□□ -0.02
LCLAT1-202ENST00000319406 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
LCLAT1-202ENST00000319406 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
LCLAT1-202ENST00000319406 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
LCLAT1-202ENST00000319406 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
LCLAT1-202ENST00000319406 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
LCLAT1-202ENST00000319406 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
LCLAT1-202ENST00000319406 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
LCLAT1-202ENST00000319406 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
LCLAT1-202ENST00000319406 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
LCLAT1-202ENST00000319406 ANP32EQ9BTT0 268 aa14.86□□□□□ -0.03
LCLAT1-202ENST00000319406 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
LCLAT1-202ENST00000319406 FMN1Q68DA7 1419 aa14.83□□□□□ -0.04
LCLAT1-202ENST00000319406 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
LCLAT1-202ENST00000319406 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.04
LCLAT1-202ENST00000319406 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
LCLAT1-202ENST00000319406 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
LCLAT1-202ENST00000319406 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
LCLAT1-202ENST00000319406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.79□□□□□ -0.04
LCLAT1-202ENST00000319406 PBRM1Q86U86 1689 aa14.79□□□□□ -0.04
LCLAT1-202ENST00000319406 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
LCLAT1-202ENST00000319406 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
LCLAT1-202ENST00000319406 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.04
LCLAT1-202ENST00000319406 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
LCLAT1-202ENST00000319406 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
LCLAT1-202ENST00000319406 ITGAEP38570 1179 aa14.73□□□□□ -0.05
LCLAT1-202ENST00000319406 WDR62O43379 1518 aa14.72□□□□□ -0.05
LCLAT1-202ENST00000319406 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.05
LCLAT1-202ENST00000319406 ARHGEF11O15085 1522 aa14.69□□□□□ -0.06
LCLAT1-202ENST00000319406 IQGAP2Q13576 1575 aa14.69□□□□□ -0.06
LCLAT1-202ENST00000319406 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
LCLAT1-202ENST00000319406 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
LCLAT1-202ENST00000319406 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
LCLAT1-202ENST00000319406 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
LCLAT1-202ENST00000319406 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
LCLAT1-202ENST00000319406 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
LCLAT1-202ENST00000319406 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
LCLAT1-202ENST00000319406 ZNF608Q9ULD9 1512 aaPredicted RBP14.65□□□□□ -0.06
LCLAT1-202ENST00000319406 UGGT2Q9NYU1 1516 aa14.65□□□□□ -0.06
LCLAT1-202ENST00000319406 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
LCLAT1-202ENST00000319406 CCDC18Q5T9S5 1454 aa14.64□□□□□ -0.07
LCLAT1-202ENST00000319406 PTPRKQ15262 1439 aa14.64□□□□□ -0.07
LCLAT1-202ENST00000319406 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
LCLAT1-202ENST00000319406 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
LCLAT1-202ENST00000319406 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
LCLAT1-202ENST00000319406 EPRSP07814 1512 aaKnown RBP14.59□□□□□ -0.07
LCLAT1-202ENST00000319406 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
LCLAT1-202ENST00000319406 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.07
LCLAT1-202ENST00000319406 TCOF1Q13428 1488 aaKnown RBP14.58□□□□□ -0.07
LCLAT1-202ENST00000319406 KIAA0586Q9BVV6 1533 aa14.57□□□□□ -0.08
LCLAT1-202ENST00000319406 DISP1Q96F81 1524 aa14.57□□□□□ -0.08
LCLAT1-202ENST00000319406 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
LCLAT1-202ENST00000319406 NAIPQ13075 1403 aa14.55□□□□□ -0.08
LCLAT1-202ENST00000319406 GRIN2AQ12879 1464 aa14.55□□□□□ -0.08
LCLAT1-202ENST00000319406 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
LCLAT1-202ENST00000319406 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
LCLAT1-202ENST00000319406 UACAQ9BZF9 1416 aa14.53□□□□□ -0.08
LCLAT1-202ENST00000319406 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
LCLAT1-202ENST00000319406 BCANQ96GW7 911 aa14.5□□□□□ -0.09
LCLAT1-202ENST00000319406 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
LCLAT1-202ENST00000319406 AKNAQ7Z591 1439 aa14.5□□□□□ -0.09
LCLAT1-202ENST00000319406 MIA2Q96PC5 1412 aa14.5□□□□□ -0.09
LCLAT1-202ENST00000319406 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
LCLAT1-202ENST00000319406 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
LCLAT1-202ENST00000319406 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
LCLAT1-202ENST00000319406 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
LCLAT1-202ENST00000319406 RAPGEF6Q8TEU7 1601 aa14.46□□□□□ -0.09
LCLAT1-202ENST00000319406 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
LCLAT1-202ENST00000319406 SYNJ2O15056 1496 aa14.46□□□□□ -0.1
LCLAT1-202ENST00000319406 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
LCLAT1-202ENST00000319406 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
LCLAT1-202ENST00000319406 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
LCLAT1-202ENST00000319406 PPP1R15AO75807 674 aaPredicted RBP14.45□□□□□ -0.1
LCLAT1-202ENST00000319406 NUP160Q12769 1436 aa14.43□□□□□ -0.1
LCLAT1-202ENST00000319406 KDM6BO15054 1643 aa14.42□□□□□ -0.1
LCLAT1-202ENST00000319406 FKBP8Q14318 412 aa14.41□□□□□ -0.1
LCLAT1-202ENST00000319406 DNMT1P26358 1616 aaKnown RBP14.39□□□□□ -0.11
LCLAT1-202ENST00000319406 MSH5O43196 834 aa14.39□□□□□ -0.11
LCLAT1-202ENST00000319406 ROCK1Q13464 1354 aa14.37□□□□□ -0.11
LCLAT1-202ENST00000319406 DAPK1P53355 1430 aa14.37□□□□□ -0.11
LCLAT1-202ENST00000319406 ADCY10Q96PN6 1610 aa14.36□□□□□ -0.11
LCLAT1-202ENST00000319406 ABCC5O15440 1437 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms