RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
PABPC1-201ENST00000318607 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
PABPC1-201ENST00000318607 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
PABPC1-201ENST00000318607 NBR1Q14596 966 aa20.02■□□□□ 0.8
PABPC1-201ENST00000318607 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.79
PABPC1-201ENST00000318607 VPS8Q8N3P4 1428 aa19.99■□□□□ 0.79
PABPC1-201ENST00000318607 WDR62O43379 1518 aa19.96■□□□□ 0.79
PABPC1-201ENST00000318607 EEA1Q15075 1411 aa19.94■□□□□ 0.78
PABPC1-201ENST00000318607 CDK11AQ9UQ88 783 aaPredicted RBP19.93■□□□□ 0.78
PABPC1-201ENST00000318607 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
PABPC1-201ENST00000318607 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
PABPC1-201ENST00000318607 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
PABPC1-201ENST00000318607 MSH5O43196 834 aa19.9■□□□□ 0.78
PABPC1-201ENST00000318607 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
PABPC1-201ENST00000318607 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
PABPC1-201ENST00000318607 B4GALNT3Q6L9W6 998 aa19.87■□□□□ 0.77
PABPC1-201ENST00000318607 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
PABPC1-201ENST00000318607 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
PABPC1-201ENST00000318607 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
PABPC1-201ENST00000318607 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
PABPC1-201ENST00000318607 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
PABPC1-201ENST00000318607 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
PABPC1-201ENST00000318607 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
PABPC1-201ENST00000318607 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
PABPC1-201ENST00000318607 SALL2Q9Y467 1007 aaPredicted RBP19.71■□□□□ 0.75
PABPC1-201ENST00000318607 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
PABPC1-201ENST00000318607 KIF21BO75037 1637 aa19.7■□□□□ 0.74
PABPC1-201ENST00000318607 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
PABPC1-201ENST00000318607 DEKP35659 375 aaKnown RBP19.67■□□□□ 0.74
PABPC1-201ENST00000318607 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
PABPC1-201ENST00000318607 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PABPC1-201ENST00000318607 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
PABPC1-201ENST00000318607 FOXD1Q16676 465 aa19.64■□□□□ 0.73
PABPC1-201ENST00000318607 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.73
PABPC1-201ENST00000318607 MRS2Q9HD23 443 aa19.62■□□□□ 0.73
PABPC1-201ENST00000318607 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
PABPC1-201ENST00000318607 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
PABPC1-201ENST00000318607 CUL7Q14999 1698 aa19.57■□□□□ 0.72
PABPC1-201ENST00000318607 CUX1P39880 1505 aa19.57■□□□□ 0.72
PABPC1-201ENST00000318607 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
PABPC1-201ENST00000318607 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
PABPC1-201ENST00000318607 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
PABPC1-201ENST00000318607 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
PABPC1-201ENST00000318607 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
PABPC1-201ENST00000318607 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
PABPC1-201ENST00000318607 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
PABPC1-201ENST00000318607 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
PABPC1-201ENST00000318607 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
PABPC1-201ENST00000318607 PHLDB1Q86UU1 1377 aa19.48■□□□□ 0.71
PABPC1-201ENST00000318607 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
PABPC1-201ENST00000318607 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
PABPC1-201ENST00000318607 PPP4R2Q9NY27 417 aa19.45■□□□□ 0.7
PABPC1-201ENST00000318607 ANO8Q9HCE9 1232 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-201ENST00000318607 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-201ENST00000318607 NOP58Q9Y2X3 529 aaKnown RBP19.42■□□□□ 0.7
PABPC1-201ENST00000318607 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
PABPC1-201ENST00000318607 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
PABPC1-201ENST00000318607 CUX2O14529 1486 aa19.39■□□□□ 0.69
PABPC1-201ENST00000318607 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
PABPC1-201ENST00000318607 ANP32AP39687 249 aaKnown RBP19.39■□□□□ 0.69
PABPC1-201ENST00000318607 SHROOM2Q13796 1616 aa19.38■□□□□ 0.69
PABPC1-201ENST00000318607 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
PABPC1-201ENST00000318607 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
PABPC1-201ENST00000318607 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
PABPC1-201ENST00000318607 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
PABPC1-201ENST00000318607 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
PABPC1-201ENST00000318607 WASHC2AQ641Q2 1341 aa19.35■□□□□ 0.69
PABPC1-201ENST00000318607 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
PABPC1-201ENST00000318607 MAPKBP1O60336 1514 aa19.33■□□□□ 0.69
PABPC1-201ENST00000318607 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.69
PABPC1-201ENST00000318607 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
PABPC1-201ENST00000318607 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
PABPC1-201ENST00000318607 EIF5BO60841 1220 aaKnown RBP19.31■□□□□ 0.68
PABPC1-201ENST00000318607 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
PABPC1-201ENST00000318607 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
PABPC1-201ENST00000318607 MTUS2Q5JR59 1369 aa19.3■□□□□ 0.68
PABPC1-201ENST00000318607 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
PABPC1-201ENST00000318607 L3MBTL2Q969R5 705 aa19.28■□□□□ 0.68
PABPC1-201ENST00000318607 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
PABPC1-201ENST00000318607 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
PABPC1-201ENST00000318607 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
PABPC1-201ENST00000318607 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
PABPC1-201ENST00000318607 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
PABPC1-201ENST00000318607 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
PABPC1-201ENST00000318607 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
PABPC1-201ENST00000318607 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
PABPC1-201ENST00000318607 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
PABPC1-201ENST00000318607 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
PABPC1-201ENST00000318607 NEFMP07197 916 aa19.21■□□□□ 0.67
PABPC1-201ENST00000318607 ARXQ96QS3 562 aa19.2■□□□□ 0.66
PABPC1-201ENST00000318607 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
PABPC1-201ENST00000318607 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
PABPC1-201ENST00000318607 IGF1RP08069 1367 aa19.17■□□□□ 0.66
PABPC1-201ENST00000318607 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
PABPC1-201ENST00000318607 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
PABPC1-201ENST00000318607 PLIN1O60240 522 aa19.13■□□□□ 0.65
PABPC1-201ENST00000318607 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
PABPC1-201ENST00000318607 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
PABPC1-201ENST00000318607 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
PABPC1-201ENST00000318607 IPO9Q96P70 1041 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms