RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 ARHGAP35Q9NRY4 1499 aa35.9■■■■□ 3.34
APBA3-201ENST00000316757 ZNF608Q9ULD9 1512 aaPredicted RBP35.87■■■■□ 3.33
APBA3-201ENST00000316757 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
APBA3-201ENST00000316757 ADAMTS12P58397 1594 aa35.84■■■■□ 3.33
APBA3-201ENST00000316757 EIF4G3O43432 1585 aaKnown RBP35.84■■■■□ 3.33
APBA3-201ENST00000316757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.81■■■■□ 3.32
APBA3-201ENST00000316757 FHAD1B1AJZ9 1412 aa35.77■■■■□ 3.32
APBA3-201ENST00000316757 CCER1Q8TC90 406 aaPredicted RBP35.76■■■■□ 3.32
APBA3-201ENST00000316757 EFCAB5A4FU69 1503 aa35.7■■■■□ 3.31
APBA3-201ENST00000316757 SNAPC4Q5SXM2 1469 aa35.61■■■■□ 3.29
APBA3-201ENST00000316757 SAMD9Q5K651 1589 aa35.55■■■■□ 3.28
APBA3-201ENST00000316757 MAGI1Q96QZ7 1491 aaPredicted RBP35.54■■■■□ 3.28
APBA3-201ENST00000316757 KANK4Q5T7N3 995 aaPredicted RBP35.51■■■■□ 3.28
APBA3-201ENST00000316757 IQGAP2Q13576 1575 aa35.49■■■■□ 3.27
APBA3-201ENST00000316757 FHOD3Q2V2M9 1422 aa35.48■■■■□ 3.27
APBA3-201ENST00000316757 HNRNPUL2Q1KMD3 747 aaKnown RBP35.47■■■■□ 3.27
APBA3-201ENST00000316757 MAP3K1Q13233 1512 aa35.46■■■■□ 3.27
APBA3-201ENST00000316757 GRIN2AQ12879 1464 aa35.45■■■■□ 3.27
APBA3-201ENST00000316757 PCF11O94913 1555 aaKnown RBP35.44■■■■□ 3.26
APBA3-201ENST00000316757 P3H3Q8IVL6 736 aa35.42■■■■□ 3.26
APBA3-201ENST00000316757 SYNJ2O15056 1496 aa35.4■■■■□ 3.26
APBA3-201ENST00000316757 TIAM1Q13009 1591 aa35.39■■■■□ 3.26
APBA3-201ENST00000316757 CFAP43Q8NDM7 1665 aa35.35■■■■□ 3.25
APBA3-201ENST00000316757 RRBP1Q9P2E9 1410 aaKnown RBP35.35■■■■□ 3.25
APBA3-201ENST00000316757 FYCO1Q9BQS8 1478 aa35.34■■■■□ 3.25
APBA3-201ENST00000316757 FMN1Q68DA7 1419 aa35.33■■■■□ 3.25
APBA3-201ENST00000316757 KIAA0586Q9BVV6 1533 aa35.3■■■■□ 3.24
APBA3-201ENST00000316757 CASKIN1Q8WXD9 1431 aa35.28■■■■□ 3.24
APBA3-201ENST00000316757 UGGT2Q9NYU1 1516 aa35.28■■■■□ 3.24
APBA3-201ENST00000316757 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
APBA3-201ENST00000316757 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
APBA3-201ENST00000316757 LRRC9Q6ZRR7 1453 aa35.2■■■■□ 3.23
APBA3-201ENST00000316757 CCNB3Q8WWL7 1395 aa35.16■■■■□ 3.22
APBA3-201ENST00000316757 NUP160Q12769 1436 aa35.15■■■■□ 3.22
APBA3-201ENST00000316757 LRRIQ1Q96JM4 1722 aa35.14■■■■□ 3.22
APBA3-201ENST00000316757 KIAA0556O60303 1618 aa35.13■■■■□ 3.21
APBA3-201ENST00000316757 FBLN2P98095 1184 aa35.13■■■■□ 3.21
APBA3-201ENST00000316757 ATP1B4Q9UN42 357 aaPredicted RBP35.09■■■■□ 3.21
APBA3-201ENST00000316757 CHD1O14646 1710 aa35.08■■■■□ 3.21
APBA3-201ENST00000316757 DISP1Q96F81 1524 aa35.08■■■■□ 3.21
APBA3-201ENST00000316757 HECW1Q76N89 1606 aa35.02■■■■□ 3.2
APBA3-201ENST00000316757 PHLDB1Q86UU1 1377 aa34.95■■■■□ 3.19
APBA3-201ENST00000316757 CCDC18Q5T9S5 1454 aa34.93■■■■□ 3.18
APBA3-201ENST00000316757 CLSPNQ9HAW4 1339 aa34.9■■■■□ 3.18
APBA3-201ENST00000316757 DHX57Q6P158 1386 aaKnown RBP34.89■■■■□ 3.18
APBA3-201ENST00000316757 CARMIL2Q6F5E8 1435 aa34.84■■■■□ 3.17
APBA3-201ENST00000316757 RAPGEF6Q8TEU7 1601 aa34.84■■■■□ 3.17
APBA3-201ENST00000316757 JPH4Q96JJ6 628 aa34.83■■■■□ 3.17
APBA3-201ENST00000316757 EHBP1L1Q8N3D4 1523 aa34.82■■■■□ 3.16
APBA3-201ENST00000316757 EPRSP07814 1512 aaKnown RBP34.82■■■■□ 3.16
APBA3-201ENST00000316757 MTUS2Q5JR59 1369 aa34.81■■■■□ 3.16
APBA3-201ENST00000316757 SUPT6HQ7KZ85 1726 aaKnown RBP34.79■■■■□ 3.16
APBA3-201ENST00000316757 ITGAEP38570 1179 aa34.78■■■■□ 3.16
APBA3-201ENST00000316757 CDK13Q14004 1512 aaKnown RBP34.74■■■■□ 3.15
APBA3-201ENST00000316757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.73■■■■□ 3.15
APBA3-201ENST00000316757 MAGI3Q5TCQ9 1506 aa34.73■■■■□ 3.15
APBA3-201ENST00000316757 SHROOM2Q13796 1616 aa34.71■■■■□ 3.15
APBA3-201ENST00000316757 NUP153P49790 1475 aaKnown RBP34.69■■■■□ 3.14
APBA3-201ENST00000316757 FAM50AQ14320 339 aaKnown RBP34.69■■■■□ 3.14
APBA3-201ENST00000316757 ZNF316A6NFI3 1004 aaPredicted RBP34.67■■■■□ 3.14
APBA3-201ENST00000316757 RAB3GAP2Q9H2M9 1393 aa34.66■■■■□ 3.14
APBA3-201ENST00000316757 NCOA2Q15596 1464 aa34.66■■■■□ 3.14
APBA3-201ENST00000316757 SETD5Q9C0A6 1442 aa34.64■■■■□ 3.14
APBA3-201ENST00000316757 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
APBA3-201ENST00000316757 FGD6Q6ZV73 1430 aa34.63■■■■□ 3.13
APBA3-201ENST00000316757 DIEXFQ68CQ4 756 aaKnown RBP34.62■■■■□ 3.13
APBA3-201ENST00000316757 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
APBA3-201ENST00000316757 PLB1Q6P1J6 1458 aa34.61■■■■□ 3.13
APBA3-201ENST00000316757 ABCA8O94911 1581 aa34.58■■■■□ 3.13
APBA3-201ENST00000316757 CLASP1Q7Z460 1538 aa34.57■■■■□ 3.12
APBA3-201ENST00000316757 MYOM3Q5VTT5 1437 aa34.54■■■■□ 3.12
APBA3-201ENST00000316757 ARID3CA6NKF2 412 aa34.53■■■■□ 3.12
APBA3-201ENST00000316757 PTPRGP23470 1445 aa34.44■■■■□ 3.1
APBA3-201ENST00000316757 PTPN23Q9H3S7 1636 aa34.44■■■■□ 3.1
APBA3-201ENST00000316757 MAPKBP1O60336 1514 aa34.44■■■■□ 3.1
APBA3-201ENST00000316757 CDK11AQ9UQ88 783 aaPredicted RBP34.42■■■■□ 3.1
APBA3-201ENST00000316757 ERCC6L2Q5T890 1561 aa34.41■■■■□ 3.1
APBA3-201ENST00000316757 ADCY10Q96PN6 1610 aa34.38■■■■□ 3.09
APBA3-201ENST00000316757 TROQ12816 1431 aaPredicted RBP34.36■■■■□ 3.09
APBA3-201ENST00000316757 TCOF1Q13428 1488 aaKnown RBP34.32■■■■□ 3.08
APBA3-201ENST00000316757 ATP10BO94823 1461 aa34.31■■■■□ 3.08
APBA3-201ENST00000316757 MIA2Q96PC5 1412 aa34.31■■■■□ 3.08
APBA3-201ENST00000316757 PTPRKQ15262 1439 aa34.3■■■■□ 3.08
APBA3-201ENST00000316757 HFM1A2PYH4 1435 aa34.28■■■■□ 3.08
APBA3-201ENST00000316757 KIF14Q15058 1648 aa34.27■■■■□ 3.08
APBA3-201ENST00000316757 ITSN2Q9NZM3 1697 aa34.27■■■■□ 3.08
APBA3-201ENST00000316757 UACAQ9BZF9 1416 aa34.27■■■■□ 3.08
APBA3-201ENST00000316757 ABCC2Q92887 1545 aa34.21■■■■□ 3.07
APBA3-201ENST00000316757 NAIPQ13075 1403 aa34.16■■■■□ 3.06
APBA3-201ENST00000316757 PLEKHD1A6NEE1 506 aa34.15■■■■□ 3.06
APBA3-201ENST00000316757 CDC42BPAQ5VT25 1732 aa34.12■■■■□ 3.05
APBA3-201ENST00000316757 GCC2Q8IWJ2 1684 aa34.09■■■■□ 3.05
APBA3-201ENST00000316757 GPATCH8Q9UKJ3 1502 aaKnown RBP34.08■■■■□ 3.05
APBA3-201ENST00000316757 DNMT1P26358 1616 aaKnown RBP34.07■■■■□ 3.04
APBA3-201ENST00000316757 UHRF1BP1LA0JNW5 1464 aa34.06■■■■□ 3.04
APBA3-201ENST00000316757 ABCC10Q5T3U5 1492 aa34.06■■■■□ 3.04
APBA3-201ENST00000316757 AKNAQ7Z591 1439 aa34.06■■■■□ 3.04
APBA3-201ENST00000316757 TIMELESSQ9UNS1 1208 aa34.05■■■■□ 3.04
APBA3-201ENST00000316757 SIN3AQ96ST3 1273 aa34.03■■■■□ 3.04
APBA3-201ENST00000316757 ZCCHC11Q5TAX3 1644 aaKnown RBP34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms