RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
VAMP2-201ENST00000316509 IFT140Q96RY7 1462 aa21.02■□□□□ 0.96
VAMP2-201ENST00000316509 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.952e-9■■■■■ 31
VAMP2-201ENST00000316509 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
VAMP2-201ENST00000316509 RRBP1Q9P2E9 1410 aaKnown RBP21■□□□□ 0.95
VAMP2-201ENST00000316509 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
VAMP2-201ENST00000316509 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
VAMP2-201ENST00000316509 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
VAMP2-201ENST00000316509 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
VAMP2-201ENST00000316509 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
VAMP2-201ENST00000316509 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
VAMP2-201ENST00000316509 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
VAMP2-201ENST00000316509 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
VAMP2-201ENST00000316509 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
VAMP2-201ENST00000316509 LRRC9Q6ZRR7 1453 aa20.91■□□□□ 0.94
VAMP2-201ENST00000316509 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
VAMP2-201ENST00000316509 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.93
VAMP2-201ENST00000316509 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
VAMP2-201ENST00000316509 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
VAMP2-201ENST00000316509 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
VAMP2-201ENST00000316509 PCF11O94913 1555 aaKnown RBP20.87■□□□□ 0.93
VAMP2-201ENST00000316509 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
VAMP2-201ENST00000316509 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
VAMP2-201ENST00000316509 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
VAMP2-201ENST00000316509 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
VAMP2-201ENST00000316509 IQGAP2Q13576 1575 aa20.77■□□□□ 0.91
VAMP2-201ENST00000316509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■□□□ 12.8
VAMP2-201ENST00000316509 UGGT2Q9NYU1 1516 aa20.73■□□□□ 0.91
VAMP2-201ENST00000316509 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
VAMP2-201ENST00000316509 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
VAMP2-201ENST00000316509 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
VAMP2-201ENST00000316509 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.91
VAMP2-201ENST00000316509 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
VAMP2-201ENST00000316509 CCDC18Q5T9S5 1454 aa20.68■□□□□ 0.9
VAMP2-201ENST00000316509 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
VAMP2-201ENST00000316509 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
VAMP2-201ENST00000316509 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
VAMP2-201ENST00000316509 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
VAMP2-201ENST00000316509 HECW1Q76N89 1606 aa20.61■□□□□ 0.89
VAMP2-201ENST00000316509 EHBP1L1Q8N3D4 1523 aa20.61■□□□□ 0.89
VAMP2-201ENST00000316509 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.88
VAMP2-201ENST00000316509 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
VAMP2-201ENST00000316509 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
VAMP2-201ENST00000316509 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
VAMP2-201ENST00000316509 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
VAMP2-201ENST00000316509 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
VAMP2-201ENST00000316509 KIAA0556O60303 1618 aa20.54■□□□□ 0.88
VAMP2-201ENST00000316509 DISP1Q96F81 1524 aa20.54■□□□□ 0.88
VAMP2-201ENST00000316509 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
VAMP2-201ENST00000316509 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
VAMP2-201ENST00000316509 ARHGEF11O15085 1522 aa20.52■□□□□ 0.88
VAMP2-201ENST00000316509 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
VAMP2-201ENST00000316509 NUP160Q12769 1436 aa20.52■□□□□ 0.88
VAMP2-201ENST00000316509 MYOM3Q5VTT5 1437 aa20.52■□□□□ 0.88
VAMP2-201ENST00000316509 ITGAEP38570 1179 aa20.51■□□□□ 0.87
VAMP2-201ENST00000316509 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
VAMP2-201ENST00000316509 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
VAMP2-201ENST00000316509 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
VAMP2-201ENST00000316509 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
VAMP2-201ENST00000316509 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
VAMP2-201ENST00000316509 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
VAMP2-201ENST00000316509 TCOF1Q13428 1488 aaKnown RBP20.42■□□□□ 0.86
VAMP2-201ENST00000316509 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
VAMP2-201ENST00000316509 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
VAMP2-201ENST00000316509 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
VAMP2-201ENST00000316509 FBLN2P98095 1184 aa20.38■□□□□ 0.85
VAMP2-201ENST00000316509 PTPN23Q9H3S7 1636 aa20.38■□□□□ 0.85
VAMP2-201ENST00000316509 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
VAMP2-201ENST00000316509 HFM1A2PYH4 1435 aa20.37■□□□□ 0.85
VAMP2-201ENST00000316509 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
VAMP2-201ENST00000316509 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
VAMP2-201ENST00000316509 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
VAMP2-201ENST00000316509 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
VAMP2-201ENST00000316509 AKNAQ7Z591 1439 aa20.31■□□□□ 0.84
VAMP2-201ENST00000316509 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
VAMP2-201ENST00000316509 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
VAMP2-201ENST00000316509 NAIPQ13075 1403 aa20.27■□□□□ 0.83
VAMP2-201ENST00000316509 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
VAMP2-201ENST00000316509 ABCA8O94911 1581 aa20.24■□□□□ 0.83
VAMP2-201ENST00000316509 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
VAMP2-201ENST00000316509 ADCY10Q96PN6 1610 aa20.21■□□□□ 0.83
VAMP2-201ENST00000316509 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
VAMP2-201ENST00000316509 CHD1O14646 1710 aa20.2■□□□□ 0.82
VAMP2-201ENST00000316509 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
VAMP2-201ENST00000316509 GCC2Q8IWJ2 1684 aa20.17■□□□□ 0.82
VAMP2-201ENST00000316509 PLEKHD1A6NEE1 506 aa20.17■□□□□ 0.82
VAMP2-201ENST00000316509 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
VAMP2-201ENST00000316509 PTPRGP23470 1445 aa20.16■□□□□ 0.82
VAMP2-201ENST00000316509 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
VAMP2-201ENST00000316509 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
VAMP2-201ENST00000316509 DAPK1P53355 1430 aa20.14■□□□□ 0.81
VAMP2-201ENST00000316509 ATP10BO94823 1461 aa20.13■□□□□ 0.81
VAMP2-201ENST00000316509 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
VAMP2-201ENST00000316509 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
VAMP2-201ENST00000316509 ABCC5O15440 1437 aa20.11■□□□□ 0.81
VAMP2-201ENST00000316509 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
VAMP2-201ENST00000316509 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
VAMP2-201ENST00000316509 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
VAMP2-201ENST00000316509 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
VAMP2-201ENST00000316509 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms