RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-204ENST00000313084 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
SEC16A-204ENST00000313084 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.09
SEC16A-204ENST00000313084 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
SEC16A-204ENST00000313084 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
SEC16A-204ENST00000313084 RAB3GAP2Q9H2M9 1393 aa14.48□□□□□ -0.09
SEC16A-204ENST00000313084 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
SEC16A-204ENST00000313084 FBLN2P98095 1184 aa14.44□□□□□ -0.1
SEC16A-204ENST00000313084 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
SEC16A-204ENST00000313084 MTUS2Q5JR59 1369 aa14.41□□□□□ -0.1
SEC16A-204ENST00000313084 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
SEC16A-204ENST00000313084 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
SEC16A-204ENST00000313084 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
SEC16A-204ENST00000313084 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
SEC16A-204ENST00000313084 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
SEC16A-204ENST00000313084 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
SEC16A-204ENST00000313084 RRP7BPQ9NSQ0 103 aa14.38□□□□□ -0.11
SEC16A-204ENST00000313084 AQRO60306 1485 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■■■ 42.4
SEC16A-204ENST00000313084 KCNH8Q96L42 1107 aa14.36□□□□□ -0.11
SEC16A-204ENST00000313084 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
SEC16A-204ENST00000313084 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
SEC16A-204ENST00000313084 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
SEC16A-204ENST00000313084 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
SEC16A-204ENST00000313084 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
SEC16A-204ENST00000313084 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
SEC16A-204ENST00000313084 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
SEC16A-204ENST00000313084 CLSPNQ9HAW4 1339 aa14.29□□□□□ -0.12
SEC16A-204ENST00000313084 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
SEC16A-204ENST00000313084 FOXD1Q16676 465 aa14.28□□□□□ -0.12
SEC16A-204ENST00000313084 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
SEC16A-204ENST00000313084 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
SEC16A-204ENST00000313084 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
SEC16A-204ENST00000313084 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
SEC16A-204ENST00000313084 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
SEC16A-204ENST00000313084 MAPKBP1O60336 1514 aa14.22□□□□□ -0.13
SEC16A-204ENST00000313084 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
SEC16A-204ENST00000313084 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
SEC16A-204ENST00000313084 TONSLQ96HA7 1378 aa14.21□□□□□ -0.14
SEC16A-204ENST00000313084 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
SEC16A-204ENST00000313084 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
SEC16A-204ENST00000313084 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
SEC16A-204ENST00000313084 BCANQ96GW7 911 aa14.19□□□□□ -0.14
SEC16A-204ENST00000313084 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
SEC16A-204ENST00000313084 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
SEC16A-204ENST00000313084 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
SEC16A-204ENST00000313084 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
SEC16A-204ENST00000313084 CUL7Q14999 1698 aa14.16□□□□□ -0.14
SEC16A-204ENST00000313084 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
SEC16A-204ENST00000313084 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
SEC16A-204ENST00000313084 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
SEC16A-204ENST00000313084 CCDC18Q5T9S5 1454 aa14.14□□□□□ -0.15
SEC16A-204ENST00000313084 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
SEC16A-204ENST00000313084 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SEC16A-204ENST00000313084 PPP1R15AO75807 674 aaPredicted RBP14.13□□□□□ -0.15
SEC16A-204ENST00000313084 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
SEC16A-204ENST00000313084 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
SEC16A-204ENST00000313084 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
SEC16A-204ENST00000313084 ABCA5Q8WWZ7 1642 aa14.11□□□□□ -0.15
SEC16A-204ENST00000313084 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
SEC16A-204ENST00000313084 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
SEC16A-204ENST00000313084 MAGI3Q5TCQ9 1506 aa14.08□□□□□ -0.16
SEC16A-204ENST00000313084 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
SEC16A-204ENST00000313084 SENP3-EIF4A1A0A087X0R7 540 aa14.06□□□□□ -0.16
SEC16A-204ENST00000313084 ANP32CO43423 234 aa14.06□□□□□ -0.16
SEC16A-204ENST00000313084 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
SEC16A-204ENST00000313084 NAIPQ13075 1403 aa14.05□□□□□ -0.16
SEC16A-204ENST00000313084 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
SEC16A-204ENST00000313084 MPHOSPH9Q99550 1183 aa14.03□□□□□ -0.16
SEC16A-204ENST00000313084 CFDP1Q9UEE9 299 aaPredicted RBP14.03□□□□□ -0.16
SEC16A-204ENST00000313084 IQGAP2Q13576 1575 aa14.03□□□□□ -0.16
SEC16A-204ENST00000313084 EPRSP07814 1512 aaKnown RBP14.03□□□□□ -0.16
SEC16A-204ENST00000313084 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
SEC16A-204ENST00000313084 HFM1A2PYH4 1435 aa14.02□□□□□ -0.17
SEC16A-204ENST00000313084 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
SEC16A-204ENST00000313084 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
SEC16A-204ENST00000313084 SAMD9Q5K651 1589 aa14.01□□□□□ -0.17
SEC16A-204ENST00000313084 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
SEC16A-204ENST00000313084 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
SEC16A-204ENST00000313084 UACAQ9BZF9 1416 aa14□□□□□ -0.17
SEC16A-204ENST00000313084 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
SEC16A-204ENST00000313084 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
SEC16A-204ENST00000313084 PRG4Q92954 1404 aaPredicted RBP13.99□□□□□ -0.17
SEC16A-204ENST00000313084 HSPA5P11021 654 aaKnown RBP13.99□□□□□ -0.17
SEC16A-204ENST00000313084 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
SEC16A-204ENST00000313084 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
SEC16A-204ENST00000313084 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
SEC16A-204ENST00000313084 FKBP8Q14318 412 aa13.98□□□□□ -0.17
SEC16A-204ENST00000313084 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
SEC16A-204ENST00000313084 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
SEC16A-204ENST00000313084 ADAMTS12P58397 1594 aa13.96□□□□□ -0.17
SEC16A-204ENST00000313084 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.18
SEC16A-204ENST00000313084 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
SEC16A-204ENST00000313084 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
SEC16A-204ENST00000313084 KDM6BO15054 1643 aa13.94□□□□□ -0.18
SEC16A-204ENST00000313084 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
SEC16A-204ENST00000313084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC16A-204ENST00000313084 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC16A-204ENST00000313084 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
SEC16A-204ENST00000313084 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
SEC16A-204ENST00000313084 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms