RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 ARXQ96QS3 562 aa25.05■■□□□ 1.6
NR1D2-201ENST00000312521 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
NR1D2-201ENST00000312521 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
NR1D2-201ENST00000312521 GLIPR1L2Q4G1C9 344 aa25.03■■□□□ 1.6
NR1D2-201ENST00000312521 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
NR1D2-201ENST00000312521 KCNH8Q96L42 1107 aa25■■□□□ 1.59
NR1D2-201ENST00000312521 A0A0G2JS52 829 aa24.98■■□□□ 1.59
NR1D2-201ENST00000312521 BECN1Q14457 450 aa24.97■■□□□ 1.59
NR1D2-201ENST00000312521 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
NR1D2-201ENST00000312521 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
NR1D2-201ENST00000312521 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
NR1D2-201ENST00000312521 CFAP53Q96M91 514 aa24.95■■□□□ 1.58
NR1D2-201ENST00000312521 EEA1Q15075 1411 aa24.94■■□□□ 1.58
NR1D2-201ENST00000312521 ZBTB7CA1YPR0 619 aa24.94■■□□□ 1.58
NR1D2-201ENST00000312521 DDRGK1Q96HY6 314 aa24.94■■□□□ 1.58
NR1D2-201ENST00000312521 NCLP19338 710 aaKnown RBP24.89■■□□□ 1.57
NR1D2-201ENST00000312521 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.57
NR1D2-201ENST00000312521 KNSTRNQ9Y448 316 aa24.89■■□□□ 1.57
NR1D2-201ENST00000312521 CDK11BP21127 795 aaKnown RBP24.88■■□□□ 1.57
NR1D2-201ENST00000312521 ANP32EQ9BTT0 268 aa24.88■■□□□ 1.57
NR1D2-201ENST00000312521 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
NR1D2-201ENST00000312521 CFDP1Q9UEE9 299 aaPredicted RBP24.86■■□□□ 1.57
NR1D2-201ENST00000312521 PLEKHG5O94827 1062 aa24.86■■□□□ 1.57
NR1D2-201ENST00000312521 GOLGA6L22H0YM25 854 aa24.85■■□□□ 1.57
NR1D2-201ENST00000312521 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
NR1D2-201ENST00000312521 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
NR1D2-201ENST00000312521 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
NR1D2-201ENST00000312521 PPM1GO15355 546 aaPredicted RBP24.75■■□□□ 1.55
NR1D2-201ENST00000312521 FTSJ3Q8IY81 847 aaKnown RBP24.74■■□□□ 1.55
NR1D2-201ENST00000312521 HAP1P54257 671 aaPredicted RBP24.72■■□□□ 1.55
NR1D2-201ENST00000312521 CASC1Q6TDU7 716 aa24.72■■□□□ 1.55
NR1D2-201ENST00000312521 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
NR1D2-201ENST00000312521 NUDCQ9Y266 331 aa24.71■■□□□ 1.55
NR1D2-201ENST00000312521 ARID4BQ4LE39 1312 aaPredicted RBP24.71■■□□□ 1.55
NR1D2-201ENST00000312521 MAPK8IP3Q9UPT6 1336 aa24.7■■□□□ 1.55
NR1D2-201ENST00000312521 SUPT16HQ9Y5B9 1047 aaKnown RBP24.7■■□□□ 1.54
NR1D2-201ENST00000312521 KIF27Q86VH2 1401 aa24.7■■□□□ 1.54
NR1D2-201ENST00000312521 SENP3-EIF4A1A0A087X0R7 540 aa24.68■■□□□ 1.54
NR1D2-201ENST00000312521 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
NR1D2-201ENST00000312521 ZRSR1Q15695 479 aaKnown RBP24.66■■□□□ 1.54
NR1D2-201ENST00000312521 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
NR1D2-201ENST00000312521 POGKQ9P215 609 aa24.63■■□□□ 1.53
NR1D2-201ENST00000312521 LAS1LQ9Y4W2 734 aaKnown RBP24.61■■□□□ 1.53
NR1D2-201ENST00000312521 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
NR1D2-201ENST00000312521 CHMP4BQ9H444 224 aaKnown RBP24.6■■□□□ 1.53
NR1D2-201ENST00000312521 PTMAP06454 111 aaKnown RBP24.58■■□□□ 1.53
NR1D2-201ENST00000312521 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.53
NR1D2-201ENST00000312521 PPP4R2Q9NY27 417 aa24.58■■□□□ 1.53
NR1D2-201ENST00000312521 SIN3AQ96ST3 1273 aa24.57■■□□□ 1.52
NR1D2-201ENST00000312521 MS4A1P11836 297 aa24.55■■□□□ 1.52
NR1D2-201ENST00000312521 FRAT1Q92837 279 aaPredicted RBP24.54■■□□□ 1.52
NR1D2-201ENST00000312521 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
NR1D2-201ENST00000312521 RGS3P49796 1198 aa24.53■■□□□ 1.52
NR1D2-201ENST00000312521 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
NR1D2-201ENST00000312521 LMOD2Q6P5Q4 547 aa24.52■■□□□ 1.52
NR1D2-201ENST00000312521 TNNT2P45379 298 aaPredicted RBP24.5■■□□□ 1.51
NR1D2-201ENST00000312521 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
NR1D2-201ENST00000312521 U2SURPO15042 1029 aaKnown RBP24.48■■□□□ 1.51
NR1D2-201ENST00000312521 CC2D1BQ5T0F9 858 aaKnown RBP24.48■■□□□ 1.51
NR1D2-201ENST00000312521 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
NR1D2-201ENST00000312521 CCNB3Q8WWL7 1395 aa24.47■■□□□ 1.51
NR1D2-201ENST00000312521 TMF1P82094 1093 aa24.46■■□□□ 1.51
NR1D2-201ENST00000312521 ERICH6BQ5W0A0 696 aa24.45■■□□□ 1.5
NR1D2-201ENST00000312521 DNTTIP2Q5QJE6 756 aaKnown RBP24.45■■□□□ 1.5
NR1D2-201ENST00000312521 TPRNQ4KMQ1 711 aa24.43■■□□□ 1.5
NR1D2-201ENST00000312521 OS9Q13438 667 aaPredicted RBP24.42■■□□□ 1.5
NR1D2-201ENST00000312521 TIMELESSQ9UNS1 1208 aa24.42■■□□□ 1.5
NR1D2-201ENST00000312521 DCAF11Q8TEB1 546 aa24.41■■□□□ 1.5
NR1D2-201ENST00000312521 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
NR1D2-201ENST00000312521 FGD1P98174 961 aa24.39■■□□□ 1.5
NR1D2-201ENST00000312521 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
NR1D2-201ENST00000312521 KCNJ4P48050 445 aa24.36■■□□□ 1.49
NR1D2-201ENST00000312521 KANK1Q14678 1352 aa24.36■■□□□ 1.49
NR1D2-201ENST00000312521 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
NR1D2-201ENST00000312521 NPHP1O15259 732 aa24.34■■□□□ 1.49
NR1D2-201ENST00000312521 NOP58Q9Y2X3 529 aaKnown RBP24.34■■□□□ 1.49
NR1D2-201ENST00000312521 PLCB2Q00722 1185 aa24.33■■□□□ 1.48
NR1D2-201ENST00000312521 B4GALNT3Q6L9W6 998 aa24.32■■□□□ 1.48
NR1D2-201ENST00000312521 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
NR1D2-201ENST00000312521 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
NR1D2-201ENST00000312521 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
NR1D2-201ENST00000312521 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
NR1D2-201ENST00000312521 NACADO15069 1562 aa24.27■■□□□ 1.48
NR1D2-201ENST00000312521 GOLGA6L6A8MZA4 724 aa24.27■■□□□ 1.48
NR1D2-201ENST00000312521 CCER2I3L3R5 266 aa24.26■■□□□ 1.47
NR1D2-201ENST00000312521 TULP1O00294 542 aaPredicted RBP24.26■■□□□ 1.47
NR1D2-201ENST00000312521 NRDCO43847 1150 aa24.26■■□□□ 1.47
NR1D2-201ENST00000312521 TAOK2Q9UL54 1235 aa24.26■■□□□ 1.47
NR1D2-201ENST00000312521 GOLGA2Q08379 1002 aa24.25■■□□□ 1.47
NR1D2-201ENST00000312521 HSCBQ8IWL3 235 aa24.25■■□□□ 1.47
NR1D2-201ENST00000312521 NAP1L2Q9ULW6 460 aaPredicted RBP24.24■■□□□ 1.47
NR1D2-201ENST00000312521 GOLGA6L4A6NEF3 574 aa24.24■■□□□ 1.47
NR1D2-201ENST00000312521 NAP1L5Q96NT1 182 aaPredicted RBP24.22■■□□□ 1.47
NR1D2-201ENST00000312521 CFAP44Q96MT7 982 aa24.21■■□□□ 1.47
NR1D2-201ENST00000312521 SOX12O15370 315 aa24.2■■□□□ 1.46
NR1D2-201ENST00000312521 MCCP23508 829 aa24.2■■□□□ 1.46
NR1D2-201ENST00000312521 MLECQ14165 292 aa24.18■■□□□ 1.46
NR1D2-201ENST00000312521 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
NR1D2-201ENST00000312521 CUX2O14529 1486 aa24.17■■□□□ 1.46
NR1D2-201ENST00000312521 SAFB2Q14151 953 aaKnown RBP eCLIP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms