RNA–Protein interactions for RNA: ENST00000311652.9

AGAP4-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP4, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-201ENST00000311652 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
AGAP4-201ENST00000311652 EFCAB5A4FU69 1503 aa28.24■■■□□ 2.11
AGAP4-201ENST00000311652 TARBP1Q13395 1621 aaKnown RBP28.19■■■□□ 2.1
AGAP4-201ENST00000311652 CCNB3Q8WWL7 1395 aa28.18■■■□□ 2.1
AGAP4-201ENST00000311652 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
AGAP4-201ENST00000311652 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
AGAP4-201ENST00000311652 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
AGAP4-201ENST00000311652 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
AGAP4-201ENST00000311652 CFAP43Q8NDM7 1665 aa28.14■■■□□ 2.1
AGAP4-201ENST00000311652 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
AGAP4-201ENST00000311652 FYCO1Q9BQS8 1478 aa28.09■■■□□ 2.09
AGAP4-201ENST00000311652 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
AGAP4-201ENST00000311652 CASKIN1Q8WXD9 1431 aa28.07■■■□□ 2.08
AGAP4-201ENST00000311652 DHX57Q6P158 1386 aaKnown RBP28.02■■■□□ 2.08
AGAP4-201ENST00000311652 CLSPNQ9HAW4 1339 aa28.02■■■□□ 2.08
AGAP4-201ENST00000311652 SAMD9Q5K651 1589 aa28.02■■■□□ 2.08
AGAP4-201ENST00000311652 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
AGAP4-201ENST00000311652 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
AGAP4-201ENST00000311652 ATP1B4Q9UN42 357 aaPredicted RBP27.99■■■□□ 2.07
AGAP4-201ENST00000311652 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
AGAP4-201ENST00000311652 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
AGAP4-201ENST00000311652 ZNF316A6NFI3 1004 aaPredicted RBP27.97■■■□□ 2.07
AGAP4-201ENST00000311652 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
AGAP4-201ENST00000311652 ITGAEP38570 1179 aa27.91■■■□□ 2.06
AGAP4-201ENST00000311652 ADAMTS12P58397 1594 aa27.89■■■□□ 2.06
AGAP4-201ENST00000311652 WDR62O43379 1518 aa27.88■■■□□ 2.05
AGAP4-201ENST00000311652 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
AGAP4-201ENST00000311652 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
AGAP4-201ENST00000311652 LRRIQ1Q96JM4 1722 aa27.82■■■□□ 2.04
AGAP4-201ENST00000311652 RAB3GAP2Q9H2M9 1393 aa27.81■■■□□ 2.04
AGAP4-201ENST00000311652 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
AGAP4-201ENST00000311652 FAM50AQ14320 339 aaKnown RBP27.8■■■□□ 2.04
AGAP4-201ENST00000311652 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
AGAP4-201ENST00000311652 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
AGAP4-201ENST00000311652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.77■■■□□ 2.04
AGAP4-201ENST00000311652 SETD5Q9C0A6 1442 aa27.77■■■□□ 2.04
AGAP4-201ENST00000311652 MTUS2Q5JR59 1369 aa27.74■■■□□ 2.03
AGAP4-201ENST00000311652 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
AGAP4-201ENST00000311652 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
AGAP4-201ENST00000311652 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
AGAP4-201ENST00000311652 EHBP1L1Q8N3D4 1523 aa27.65■■■□□ 2.02
AGAP4-201ENST00000311652 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.02
AGAP4-201ENST00000311652 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.02
AGAP4-201ENST00000311652 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
AGAP4-201ENST00000311652 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
AGAP4-201ENST00000311652 NCOA2Q15596 1464 aa27.63■■■□□ 2.01
AGAP4-201ENST00000311652 HECW1Q76N89 1606 aa27.62■■■□□ 2.01
AGAP4-201ENST00000311652 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2.01
AGAP4-201ENST00000311652 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
AGAP4-201ENST00000311652 MAGI3Q5TCQ9 1506 aa27.56■■■□□ 2
AGAP4-201ENST00000311652 GRIN2AQ12879 1464 aa27.56■■■□□ 2
AGAP4-201ENST00000311652 ARHGEF11O15085 1522 aa27.55■■■□□ 2
AGAP4-201ENST00000311652 EPRSP07814 1512 aaKnown RBP27.54■■■□□ 2
AGAP4-201ENST00000311652 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
AGAP4-201ENST00000311652 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
AGAP4-201ENST00000311652 DISP1Q96F81 1524 aa27.48■■□□□ 1.99
AGAP4-201ENST00000311652 PTPRKQ15262 1439 aa27.47■■□□□ 1.99
AGAP4-201ENST00000311652 PTPN23Q9H3S7 1636 aa27.47■■□□□ 1.99
AGAP4-201ENST00000311652 CDK13Q14004 1512 aaKnown RBP27.45■■□□□ 1.98
AGAP4-201ENST00000311652 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
AGAP4-201ENST00000311652 MIER1Q8N108 512 aa27.42■■□□□ 1.98
AGAP4-201ENST00000311652 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
AGAP4-201ENST00000311652 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
AGAP4-201ENST00000311652 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
AGAP4-201ENST00000311652 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
AGAP4-201ENST00000311652 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
AGAP4-201ENST00000311652 CENPBP07199 599 aaPredicted RBP27.38■■□□□ 1.97
AGAP4-201ENST00000311652 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
AGAP4-201ENST00000311652 NEUROD1Q13562 356 aa27.36■■□□□ 1.97
AGAP4-201ENST00000311652 SIN3AQ96ST3 1273 aa27.35■■□□□ 1.97
AGAP4-201ENST00000311652 NAIPQ13075 1403 aa27.35■■□□□ 1.97
AGAP4-201ENST00000311652 RAPGEF6Q8TEU7 1601 aa27.34■■□□□ 1.97
AGAP4-201ENST00000311652 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
AGAP4-201ENST00000311652 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
AGAP4-201ENST00000311652 TIMELESSQ9UNS1 1208 aa27.32■■□□□ 1.96
AGAP4-201ENST00000311652 ARID3CA6NKF2 412 aa27.32■■□□□ 1.96
AGAP4-201ENST00000311652 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
AGAP4-201ENST00000311652 NUP160Q12769 1436 aa27.28■■□□□ 1.96
AGAP4-201ENST00000311652 FBLN2P98095 1184 aa27.26■■□□□ 1.96
AGAP4-201ENST00000311652 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
AGAP4-201ENST00000311652 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
AGAP4-201ENST00000311652 PELP1Q8IZL8 1130 aaKnown RBP27.2■■□□□ 1.94
AGAP4-201ENST00000311652 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
AGAP4-201ENST00000311652 CARMIL2Q6F5E8 1435 aa27.19■■□□□ 1.94
AGAP4-201ENST00000311652 JPH4Q96JJ6 628 aa27.19■■□□□ 1.94
AGAP4-201ENST00000311652 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
AGAP4-201ENST00000311652 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
AGAP4-201ENST00000311652 PLB1Q6P1J6 1458 aa27.16■■□□□ 1.94
AGAP4-201ENST00000311652 PPP1R15AO75807 674 aaPredicted RBP27.14■■□□□ 1.94
AGAP4-201ENST00000311652 YTHDC1Q96MU7 727 aaKnown RBP27.14■■□□□ 1.94
AGAP4-201ENST00000311652 TROQ12816 1431 aaPredicted RBP27.12■■□□□ 1.93
AGAP4-201ENST00000311652 PRG4Q92954 1404 aaPredicted RBP27.09■■□□□ 1.93
AGAP4-201ENST00000311652 KDM6BO15054 1643 aa27.08■■□□□ 1.93
AGAP4-201ENST00000311652 DNMT1P26358 1616 aaKnown RBP27.08■■□□□ 1.93
AGAP4-201ENST00000311652 DAPK1P53355 1430 aa27.08■■□□□ 1.93
AGAP4-201ENST00000311652 TONSLQ96HA7 1378 aa27.08■■□□□ 1.93
AGAP4-201ENST00000311652 ADCY10Q96PN6 1610 aa27.05■■□□□ 1.92
AGAP4-201ENST00000311652 ROCK1Q13464 1354 aa27.05■■□□□ 1.92
AGAP4-201ENST00000311652 ABCC5O15440 1437 aa27.04■■□□□ 1.92
AGAP4-201ENST00000311652 ABCA8O94911 1581 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms