RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
SEC22A-201ENST00000309934 FBLN2P98095 1184 aa8.8□□□□□ -1
SEC22A-201ENST00000309934 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
SEC22A-201ENST00000309934 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
SEC22A-201ENST00000309934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.78□□□□□ -1
SEC22A-201ENST00000309934 HNRNPUL2Q1KMD3 747 aaKnown RBP8.78□□□□□ -1
SEC22A-201ENST00000309934 MAGI1Q96QZ7 1491 aaPredicted RBP8.78□□□□□ -1
SEC22A-201ENST00000309934 WDR62O43379 1518 aa8.78□□□□□ -1
SEC22A-201ENST00000309934 RUSC2Q8N2Y8 1516 aa8.77□□□□□ -1.01
SEC22A-201ENST00000309934 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
SEC22A-201ENST00000309934 MTUS2Q5JR59 1369 aa8.76□□□□□ -1.01
SEC22A-201ENST00000309934 HRCP23327 699 aa8.76□□□□□ -1.01
SEC22A-201ENST00000309934 EIF5BO60841 1220 aaKnown RBP8.76□□□□□ -1.01
SEC22A-201ENST00000309934 CCDC18Q5T9S5 1454 aa8.74□□□□□ -1.01
SEC22A-201ENST00000309934 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
SEC22A-201ENST00000309934 AQRO60306 1485 aaKnown RBP eCLIP8.73□□□□□ -1.01
SEC22A-201ENST00000309934 FYCO1Q9BQS8 1478 aa8.71□□□□□ -1.01
SEC22A-201ENST00000309934 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
SEC22A-201ENST00000309934 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
SEC22A-201ENST00000309934 SYNJ2O15056 1496 aa8.7□□□□□ -1.02
SEC22A-201ENST00000309934 KIAA0586Q9BVV6 1533 aa8.7□□□□□ -1.02
SEC22A-201ENST00000309934 CASKIN1Q8WXD9 1431 aa8.7□□□□□ -1.02
SEC22A-201ENST00000309934 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
SEC22A-201ENST00000309934 P3H3Q8IVL6 736 aa8.69□□□□□ -1.02
SEC22A-201ENST00000309934 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
SEC22A-201ENST00000309934 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
SEC22A-201ENST00000309934 ARHGAP35Q9NRY4 1499 aa8.68□□□□□ -1.02
SEC22A-201ENST00000309934 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
SEC22A-201ENST00000309934 PLEKHD1A6NEE1 506 aa8.68□□□□□ -1.02
SEC22A-201ENST00000309934 IQGAP2Q13576 1575 aa8.67□□□□□ -1.02
SEC22A-201ENST00000309934 SNAPC4Q5SXM2 1469 aa8.66□□□□□ -1.02
SEC22A-201ENST00000309934 AEBP2Q6ZN18 517 aaPredicted RBP8.66□□□□□ -1.02
SEC22A-201ENST00000309934 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
SEC22A-201ENST00000309934 ADAMTS12P58397 1594 aa8.65□□□□□ -1.02
SEC22A-201ENST00000309934 CTTNBP2Q8WZ74 1663 aa8.65□□□□□ -1.02
SEC22A-201ENST00000309934 CCNB3Q8WWL7 1395 aa8.65□□□□□ -1.02
SEC22A-201ENST00000309934 DNAJC5BQ9UF47 199 aa8.65□□□□□ -1.02
SEC22A-201ENST00000309934 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
SEC22A-201ENST00000309934 GRIN2AQ12879 1464 aa8.64□□□□□ -1.03
SEC22A-201ENST00000309934 TARBP1Q13395 1621 aaKnown RBP8.63□□□□□ -1.03
SEC22A-201ENST00000309934 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
SEC22A-201ENST00000309934 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
SEC22A-201ENST00000309934 DAXXQ9UER7 740 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-201ENST00000309934 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
SEC22A-201ENST00000309934 FHOD3Q2V2M9 1422 aa8.62□□□□□ -1.03
SEC22A-201ENST00000309934 EHBP1L1Q8N3D4 1523 aa8.61□□□□□ -1.03
SEC22A-201ENST00000309934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
SEC22A-201ENST00000309934 RSPH4AQ5TD94 716 aa8.61□□□□□ -1.03
SEC22A-201ENST00000309934 UGGT2Q9NYU1 1516 aa8.6□□□□□ -1.03
SEC22A-201ENST00000309934 ITGAEP38570 1179 aa8.59□□□□□ -1.03
SEC22A-201ENST00000309934 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
SEC22A-201ENST00000309934 PTPRGP23470 1445 aa8.59□□□□□ -1.03
SEC22A-201ENST00000309934 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.04
SEC22A-201ENST00000309934 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
SEC22A-201ENST00000309934 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
SEC22A-201ENST00000309934 TSPY4P0CV99 314 aa8.58□□□□□ -1.04
SEC22A-201ENST00000309934 TSPY10P0CW01 314 aa8.58□□□□□ -1.04
SEC22A-201ENST00000309934 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
SEC22A-201ENST00000309934 RRBP1Q9P2E9 1410 aaKnown RBP8.55□□□□□ -1.04
SEC22A-201ENST00000309934 CFDP1Q9UEE9 299 aaPredicted RBP8.55□□□□□ -1.04
SEC22A-201ENST00000309934 NUP160Q12769 1436 aa8.54□□□□□ -1.04
SEC22A-201ENST00000309934 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
SEC22A-201ENST00000309934 SUPT6HQ7KZ85 1726 aaKnown RBP8.54□□□□□ -1.04
SEC22A-201ENST00000309934 ZNF608Q9ULD9 1512 aaPredicted RBP8.53□□□□□ -1.04
SEC22A-201ENST00000309934 MYOM3Q5VTT5 1437 aa8.53□□□□□ -1.04
SEC22A-201ENST00000309934 SETD5Q9C0A6 1442 aa8.53□□□□□ -1.04
SEC22A-201ENST00000309934 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
SEC22A-201ENST00000309934 SAMD9Q5K651 1589 aa8.53□□□□□ -1.04
SEC22A-201ENST00000309934 PLEKHH2Q8IVE3 1493 aa8.52□□□□□ -1.05
SEC22A-201ENST00000309934 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
SEC22A-201ENST00000309934 LRRIQ1Q96JM4 1722 aa8.52□□□□□ -1.05
SEC22A-201ENST00000309934 PRG4Q92954 1404 aaPredicted RBP8.52□□□□□ -1.05
SEC22A-201ENST00000309934 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
SEC22A-201ENST00000309934 PCF11O94913 1555 aaKnown RBP8.51□□□□□ -1.05
SEC22A-201ENST00000309934 CFAP43Q8NDM7 1665 aa8.51□□□□□ -1.05
SEC22A-201ENST00000309934 TROQ12816 1431 aaPredicted RBP8.5□□□□□ -1.05
SEC22A-201ENST00000309934 KIAA0556O60303 1618 aa8.5□□□□□ -1.05
SEC22A-201ENST00000309934 FGD6Q6ZV73 1430 aa8.5□□□□□ -1.05
SEC22A-201ENST00000309934 SCAF1Q9H7N4 1312 aaKnown RBP8.49□□□□□ -1.05
SEC22A-201ENST00000309934 EPRSP07814 1512 aaKnown RBP8.49□□□□□ -1.05
SEC22A-201ENST00000309934 ANKRD30AQ9BXX3 1397 aa8.49□□□□□ -1.05
SEC22A-201ENST00000309934 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
SEC22A-201ENST00000309934 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
SEC22A-201ENST00000309934 EFCAB2Q5VUJ9 269 aa8.48□□□□□ -1.05
SEC22A-201ENST00000309934 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
SEC22A-201ENST00000309934 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
SEC22A-201ENST00000309934 RAPGEF6Q8TEU7 1601 aa8.47□□□□□ -1.05
SEC22A-201ENST00000309934 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
SEC22A-201ENST00000309934 TONSLQ96HA7 1378 aa8.47□□□□□ -1.05
SEC22A-201ENST00000309934 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
SEC22A-201ENST00000309934 KIF14Q15058 1648 aa8.44□□□□□ -1.06
SEC22A-201ENST00000309934 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
SEC22A-201ENST00000309934 ARID3CA6NKF2 412 aa8.44□□□□□ -1.06
SEC22A-201ENST00000309934 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
SEC22A-201ENST00000309934 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
SEC22A-201ENST00000309934 ROCK1Q13464 1354 aa8.43□□□□□ -1.06
SEC22A-201ENST00000309934 KANK1Q14678 1352 aa8.43□□□□□ -1.06
SEC22A-201ENST00000309934 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
SEC22A-201ENST00000309934 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
SEC22A-201ENST00000309934 PHLDB1Q86UU1 1377 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms