RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
TRIM59-201ENST00000309784 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
TRIM59-201ENST00000309784 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
TRIM59-201ENST00000309784 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
TRIM59-201ENST00000309784 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
TRIM59-201ENST00000309784 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
TRIM59-201ENST00000309784 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
TRIM59-201ENST00000309784 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
TRIM59-201ENST00000309784 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
TRIM59-201ENST00000309784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
TRIM59-201ENST00000309784 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
TRIM59-201ENST00000309784 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
TRIM59-201ENST00000309784 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
TRIM59-201ENST00000309784 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
TRIM59-201ENST00000309784 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
TRIM59-201ENST00000309784 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
TRIM59-201ENST00000309784 CTTNBP2Q8WZ74 1663 aa16.92■□□□□ 0.3
TRIM59-201ENST00000309784 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
TRIM59-201ENST00000309784 ITGAEP38570 1179 aa16.9■□□□□ 0.3
TRIM59-201ENST00000309784 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
TRIM59-201ENST00000309784 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
TRIM59-201ENST00000309784 EFCAB5A4FU69 1503 aa16.87■□□□□ 0.29
TRIM59-201ENST00000309784 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
TRIM59-201ENST00000309784 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
TRIM59-201ENST00000309784 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
TRIM59-201ENST00000309784 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
TRIM59-201ENST00000309784 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
TRIM59-201ENST00000309784 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
TRIM59-201ENST00000309784 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
TRIM59-201ENST00000309784 CEP170Q5SW79 1584 aa16.76■□□□□ 0.27
TRIM59-201ENST00000309784 FYCO1Q9BQS8 1478 aa16.74■□□□□ 0.27
TRIM59-201ENST00000309784 NUP160Q12769 1436 aa16.73■□□□□ 0.27
TRIM59-201ENST00000309784 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
TRIM59-201ENST00000309784 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
TRIM59-201ENST00000309784 SAMD9Q5K651 1589 aa16.71■□□□□ 0.27
TRIM59-201ENST00000309784 HRCP23327 699 aa16.71■□□□□ 0.27
TRIM59-201ENST00000309784 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
TRIM59-201ENST00000309784 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
TRIM59-201ENST00000309784 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
TRIM59-201ENST00000309784 CHD1O14646 1710 aa16.68■□□□□ 0.26
TRIM59-201ENST00000309784 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
TRIM59-201ENST00000309784 PTPRGP23470 1445 aa16.66■□□□□ 0.26
TRIM59-201ENST00000309784 KIAA0556O60303 1618 aa16.66■□□□□ 0.26
TRIM59-201ENST00000309784 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
TRIM59-201ENST00000309784 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
TRIM59-201ENST00000309784 PLB1Q6P1J6 1458 aa16.62■□□□□ 0.25
TRIM59-201ENST00000309784 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
TRIM59-201ENST00000309784 CDK13Q14004 1512 aaKnown RBP16.62■□□□□ 0.25
TRIM59-201ENST00000309784 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
TRIM59-201ENST00000309784 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
TRIM59-201ENST00000309784 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
TRIM59-201ENST00000309784 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
TRIM59-201ENST00000309784 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
TRIM59-201ENST00000309784 MAP3K1Q13233 1512 aa16.58■□□□□ 0.25
TRIM59-201ENST00000309784 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
TRIM59-201ENST00000309784 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
TRIM59-201ENST00000309784 CFAP43Q8NDM7 1665 aa16.54■□□□□ 0.24
TRIM59-201ENST00000309784 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
TRIM59-201ENST00000309784 NCOA2Q15596 1464 aa16.52■□□□□ 0.24
TRIM59-201ENST00000309784 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
TRIM59-201ENST00000309784 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.23
TRIM59-201ENST00000309784 RRBP1Q9P2E9 1410 aaKnown RBP16.5■□□□□ 0.23
TRIM59-201ENST00000309784 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
TRIM59-201ENST00000309784 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
TRIM59-201ENST00000309784 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRIM59-201ENST00000309784 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
TRIM59-201ENST00000309784 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
TRIM59-201ENST00000309784 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
TRIM59-201ENST00000309784 MYOM3Q5VTT5 1437 aa16.46■□□□□ 0.23
TRIM59-201ENST00000309784 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
TRIM59-201ENST00000309784 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
TRIM59-201ENST00000309784 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
TRIM59-201ENST00000309784 RRP7BPQ9NSQ0 103 aa16.43■□□□□ 0.22
TRIM59-201ENST00000309784 TROQ12816 1431 aaPredicted RBP16.42■□□□□ 0.22
TRIM59-201ENST00000309784 ATP10BO94823 1461 aa16.41■□□□□ 0.22
TRIM59-201ENST00000309784 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
TRIM59-201ENST00000309784 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
TRIM59-201ENST00000309784 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
TRIM59-201ENST00000309784 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
TRIM59-201ENST00000309784 ABCA8O94911 1581 aa16.37■□□□□ 0.21
TRIM59-201ENST00000309784 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
TRIM59-201ENST00000309784 SHROOM2Q13796 1616 aa16.35■□□□□ 0.21
TRIM59-201ENST00000309784 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
TRIM59-201ENST00000309784 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
TRIM59-201ENST00000309784 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
TRIM59-201ENST00000309784 ABCC2Q92887 1545 aa16.31■□□□□ 0.2
TRIM59-201ENST00000309784 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
TRIM59-201ENST00000309784 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
TRIM59-201ENST00000309784 PTPN23Q9H3S7 1636 aa16.3■□□□□ 0.2
TRIM59-201ENST00000309784 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
TRIM59-201ENST00000309784 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRIM59-201ENST00000309784 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
TRIM59-201ENST00000309784 KIF14Q15058 1648 aa16.28■□□□□ 0.2
TRIM59-201ENST00000309784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRIM59-201ENST00000309784 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
TRIM59-201ENST00000309784 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
TRIM59-201ENST00000309784 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
TRIM59-201ENST00000309784 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
TRIM59-201ENST00000309784 CAMSAP2Q08AD1 1489 aa16.2■□□□□ 0.18
TRIM59-201ENST00000309784 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms