RNA–Protein interactions for RNA: ENST00000308696.10

PSMD1-201, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMD1, Length 3,326 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-201ENST00000308696 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
PSMD1-201ENST00000308696 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
PSMD1-201ENST00000308696 RRBP1Q9P2E9 1410 aaKnown RBP16.99■□□□□ 0.31
PSMD1-201ENST00000308696 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
PSMD1-201ENST00000308696 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
PSMD1-201ENST00000308696 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
PSMD1-201ENST00000308696 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
PSMD1-201ENST00000308696 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
PSMD1-201ENST00000308696 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
PSMD1-201ENST00000308696 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
PSMD1-201ENST00000308696 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
PSMD1-201ENST00000308696 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PSMD1-201ENST00000308696 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
PSMD1-201ENST00000308696 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
PSMD1-201ENST00000308696 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
PSMD1-201ENST00000308696 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
PSMD1-201ENST00000308696 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.3
PSMD1-201ENST00000308696 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
PSMD1-201ENST00000308696 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
PSMD1-201ENST00000308696 FBLN2P98095 1184 aa16.87■□□□□ 0.29
PSMD1-201ENST00000308696 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
PSMD1-201ENST00000308696 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
PSMD1-201ENST00000308696 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■■□ 25.1
PSMD1-201ENST00000308696 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
PSMD1-201ENST00000308696 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
PSMD1-201ENST00000308696 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
PSMD1-201ENST00000308696 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
PSMD1-201ENST00000308696 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
PSMD1-201ENST00000308696 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
PSMD1-201ENST00000308696 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
PSMD1-201ENST00000308696 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
PSMD1-201ENST00000308696 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
PSMD1-201ENST00000308696 CUL7Q14999 1698 aa16.72■□□□□ 0.27
PSMD1-201ENST00000308696 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
PSMD1-201ENST00000308696 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
PSMD1-201ENST00000308696 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
PSMD1-201ENST00000308696 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
PSMD1-201ENST00000308696 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
PSMD1-201ENST00000308696 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
PSMD1-201ENST00000308696 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
PSMD1-201ENST00000308696 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
PSMD1-201ENST00000308696 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
PSMD1-201ENST00000308696 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
PSMD1-201ENST00000308696 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
PSMD1-201ENST00000308696 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
PSMD1-201ENST00000308696 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
PSMD1-201ENST00000308696 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
PSMD1-201ENST00000308696 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
PSMD1-201ENST00000308696 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
PSMD1-201ENST00000308696 FOXD1Q16676 465 aa16.62■□□□□ 0.25
PSMD1-201ENST00000308696 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
PSMD1-201ENST00000308696 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
PSMD1-201ENST00000308696 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
PSMD1-201ENST00000308696 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
PSMD1-201ENST00000308696 GRIN2BQ13224 1484 aa16.58■□□□□ 0.25
PSMD1-201ENST00000308696 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
PSMD1-201ENST00000308696 CDK11AQ9UQ88 783 aaPredicted RBP16.57■□□□□ 0.24
PSMD1-201ENST00000308696 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
PSMD1-201ENST00000308696 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
PSMD1-201ENST00000308696 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
PSMD1-201ENST00000308696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.53■□□□□ 0.24
PSMD1-201ENST00000308696 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
PSMD1-201ENST00000308696 ANP32CO43423 234 aa16.52■□□□□ 0.24
PSMD1-201ENST00000308696 NAIPQ13075 1403 aa16.51■□□□□ 0.23
PSMD1-201ENST00000308696 HFM1A2PYH4 1435 aa16.51■□□□□ 0.23
PSMD1-201ENST00000308696 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
PSMD1-201ENST00000308696 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
PSMD1-201ENST00000308696 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
PSMD1-201ENST00000308696 CFDP1Q9UEE9 299 aaPredicted RBP16.5■□□□□ 0.23
PSMD1-201ENST00000308696 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
PSMD1-201ENST00000308696 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
PSMD1-201ENST00000308696 MPHOSPH9Q99550 1183 aa16.49■□□□□ 0.23
PSMD1-201ENST00000308696 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
PSMD1-201ENST00000308696 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
PSMD1-201ENST00000308696 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
PSMD1-201ENST00000308696 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
PSMD1-201ENST00000308696 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
PSMD1-201ENST00000308696 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
PSMD1-201ENST00000308696 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.22
PSMD1-201ENST00000308696 BCANQ96GW7 911 aa16.45■□□□□ 0.22
PSMD1-201ENST00000308696 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
PSMD1-201ENST00000308696 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
PSMD1-201ENST00000308696 PTPN23Q9H3S7 1636 aa16.43■□□□□ 0.22
PSMD1-201ENST00000308696 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
PSMD1-201ENST00000308696 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
PSMD1-201ENST00000308696 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
PSMD1-201ENST00000308696 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
PSMD1-201ENST00000308696 PLEKHD1A6NEE1 506 aa16.41■□□□□ 0.22
PSMD1-201ENST00000308696 UGGT2Q9NYU1 1516 aa16.41■□□□□ 0.22
PSMD1-201ENST00000308696 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
PSMD1-201ENST00000308696 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
PSMD1-201ENST00000308696 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
PSMD1-201ENST00000308696 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.21
PSMD1-201ENST00000308696 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
PSMD1-201ENST00000308696 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
PSMD1-201ENST00000308696 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
PSMD1-201ENST00000308696 EIF4G2P78344 907 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSMD1-201ENST00000308696 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
PSMD1-201ENST00000308696 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.21
PSMD1-201ENST00000308696 MIA2Q96PC5 1412 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms