RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
TMOD3-201ENST00000308580 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
TMOD3-201ENST00000308580 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.27
TMOD3-201ENST00000308580 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
TMOD3-201ENST00000308580 CCDC136Q96JN2 1154 aa13.35□□□□□ -0.27
TMOD3-201ENST00000308580 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
TMOD3-201ENST00000308580 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
TMOD3-201ENST00000308580 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
TMOD3-201ENST00000308580 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
TMOD3-201ENST00000308580 SOGA1O94964 1423 aa13.33□□□□□ -0.28
TMOD3-201ENST00000308580 WDR43Q15061 677 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMOD3-201ENST00000308580 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
TMOD3-201ENST00000308580 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
TMOD3-201ENST00000308580 RGL3Q3MIN7 710 aa13.29□□□□□ -0.28
TMOD3-201ENST00000308580 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
TMOD3-201ENST00000308580 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.25□□□□□ -0.29
TMOD3-201ENST00000308580 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
TMOD3-201ENST00000308580 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
TMOD3-201ENST00000308580 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
TMOD3-201ENST00000308580 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
TMOD3-201ENST00000308580 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
TMOD3-201ENST00000308580 CUX2O14529 1486 aa13.21□□□□□ -0.3
TMOD3-201ENST00000308580 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.3
TMOD3-201ENST00000308580 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
TMOD3-201ENST00000308580 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
TMOD3-201ENST00000308580 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
TMOD3-201ENST00000308580 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
TMOD3-201ENST00000308580 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
TMOD3-201ENST00000308580 VPS8Q8N3P4 1428 aa13.16□□□□□ -0.3
TMOD3-201ENST00000308580 NBR1Q14596 966 aa13.15□□□□□ -0.3
TMOD3-201ENST00000308580 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
TMOD3-201ENST00000308580 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
TMOD3-201ENST00000308580 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
TMOD3-201ENST00000308580 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
TMOD3-201ENST00000308580 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
TMOD3-201ENST00000308580 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
TMOD3-201ENST00000308580 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
TMOD3-201ENST00000308580 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
TMOD3-201ENST00000308580 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
TMOD3-201ENST00000308580 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
TMOD3-201ENST00000308580 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
TMOD3-201ENST00000308580 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
TMOD3-201ENST00000308580 TDRD9Q8NDG6 1382 aaKnown RBP13.04□□□□□ -0.32
TMOD3-201ENST00000308580 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
TMOD3-201ENST00000308580 ARXQ96QS3 562 aa13.03□□□□□ -0.32
TMOD3-201ENST00000308580 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
TMOD3-201ENST00000308580 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.32
TMOD3-201ENST00000308580 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
TMOD3-201ENST00000308580 FOXD1Q16676 465 aa13.02□□□□□ -0.33
TMOD3-201ENST00000308580 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
TMOD3-201ENST00000308580 ARHGAP35Q9NRY4 1499 aa13.02□□□□□ -0.33
TMOD3-201ENST00000308580 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
TMOD3-201ENST00000308580 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
TMOD3-201ENST00000308580 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
TMOD3-201ENST00000308580 WIZO95785 1651 aa13□□□□□ -0.33
TMOD3-201ENST00000308580 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
TMOD3-201ENST00000308580 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
TMOD3-201ENST00000308580 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
TMOD3-201ENST00000308580 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
TMOD3-201ENST00000308580 PKD2Q13563 968 aa12.98□□□□□ -0.33
TMOD3-201ENST00000308580 ARID4BQ4LE39 1312 aaPredicted RBP12.98□□□□□ -0.33
TMOD3-201ENST00000308580 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
TMOD3-201ENST00000308580 POGKQ9P215 609 aa12.96□□□□□ -0.33
TMOD3-201ENST00000308580 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
TMOD3-201ENST00000308580 TMF1P82094 1093 aa12.96□□□□□ -0.34
TMOD3-201ENST00000308580 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
TMOD3-201ENST00000308580 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
TMOD3-201ENST00000308580 DDRGK1Q96HY6 314 aa12.94□□□□□ -0.34
TMOD3-201ENST00000308580 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
TMOD3-201ENST00000308580 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
TMOD3-201ENST00000308580 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
TMOD3-201ENST00000308580 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
TMOD3-201ENST00000308580 FTSJ3Q8IY81 847 aaKnown RBP12.93□□□□□ -0.34
TMOD3-201ENST00000308580 FRAT1Q92837 279 aaPredicted RBP12.93□□□□□ -0.34
TMOD3-201ENST00000308580 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
TMOD3-201ENST00000308580 BECN1Q14457 450 aa12.93□□□□□ -0.34
TMOD3-201ENST00000308580 RGS3P49796 1198 aa12.92□□□□□ -0.34
TMOD3-201ENST00000308580 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
TMOD3-201ENST00000308580 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
TMOD3-201ENST00000308580 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
TMOD3-201ENST00000308580 A0A0G2JS52 829 aa12.9□□□□□ -0.34
TMOD3-201ENST00000308580 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
TMOD3-201ENST00000308580 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
TMOD3-201ENST00000308580 CARMIL2Q6F5E8 1435 aa12.89□□□□□ -0.35
TMOD3-201ENST00000308580 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
TMOD3-201ENST00000308580 KANK1Q14678 1352 aa12.89□□□□□ -0.35
TMOD3-201ENST00000308580 NUP155O75694 1391 aa12.88□□□□□ -0.35
TMOD3-201ENST00000308580 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
TMOD3-201ENST00000308580 GGT6Q6P531 493 aa12.87□□□□□ -0.35
TMOD3-201ENST00000308580 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMOD3-201ENST00000308580 L3MBTL2Q969R5 705 aa12.87□□□□□ -0.35
TMOD3-201ENST00000308580 MLECQ14165 292 aa12.85□□□□□ -0.35
TMOD3-201ENST00000308580 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
TMOD3-201ENST00000308580 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
TMOD3-201ENST00000308580 MORC1Q86VD1 984 aa12.83□□□□□ -0.35
TMOD3-201ENST00000308580 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
TMOD3-201ENST00000308580 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
TMOD3-201ENST00000308580 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
TMOD3-201ENST00000308580 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMOD3-201ENST00000308580 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms