RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
LRRFIP1-203ENST00000308482 PPP1R15AO75807 674 aaPredicted RBP20.51■□□□□ 0.87
LRRFIP1-203ENST00000308482 SETD5Q9C0A6 1442 aa20.51■□□□□ 0.87
LRRFIP1-203ENST00000308482 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
LRRFIP1-203ENST00000308482 NEFLP07196 543 aa20.47■□□□□ 0.87
LRRFIP1-203ENST00000308482 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
LRRFIP1-203ENST00000308482 TIAM1Q13009 1591 aa20.43■□□□□ 0.86
LRRFIP1-203ENST00000308482 ANP32CO43423 234 aa20.39■□□□□ 0.85
LRRFIP1-203ENST00000308482 LRRC9Q6ZRR7 1453 aa20.38■□□□□ 0.85
LRRFIP1-203ENST00000308482 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
LRRFIP1-203ENST00000308482 P3H3Q8IVL6 736 aa20.35■□□□□ 0.85
LRRFIP1-203ENST00000308482 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
LRRFIP1-203ENST00000308482 MSH5O43196 834 aa20.34■□□□□ 0.85
LRRFIP1-203ENST00000308482 IGF1RP08069 1367 aa20.33■□□□□ 0.85
LRRFIP1-203ENST00000308482 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
LRRFIP1-203ENST00000308482 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
LRRFIP1-203ENST00000308482 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
LRRFIP1-203ENST00000308482 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
LRRFIP1-203ENST00000308482 CFTRP13569 1480 aa20.25■□□□□ 0.83
LRRFIP1-203ENST00000308482 PCF11O94913 1555 aaKnown RBP20.22■□□□□ 0.83
LRRFIP1-203ENST00000308482 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
LRRFIP1-203ENST00000308482 HNRNPUQ00839 825 aaKnown RBP eCLIP20.21■□□□□ 0.83
LRRFIP1-203ENST00000308482 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
LRRFIP1-203ENST00000308482 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
LRRFIP1-203ENST00000308482 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
LRRFIP1-203ENST00000308482 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
LRRFIP1-203ENST00000308482 FHOD3Q2V2M9 1422 aa20.16■□□□□ 0.82
LRRFIP1-203ENST00000308482 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
LRRFIP1-203ENST00000308482 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
LRRFIP1-203ENST00000308482 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
LRRFIP1-203ENST00000308482 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
LRRFIP1-203ENST00000308482 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
LRRFIP1-203ENST00000308482 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
LRRFIP1-203ENST00000308482 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
LRRFIP1-203ENST00000308482 CCDC184Q52MB2 194 aa20.05■□□□□ 0.8
LRRFIP1-203ENST00000308482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.05■□□□□ 0.8
LRRFIP1-203ENST00000308482 WASHC2AQ641Q2 1341 aa20.04■□□□□ 0.8
LRRFIP1-203ENST00000308482 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
LRRFIP1-203ENST00000308482 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.81e-7■■■■■ 27.6
LRRFIP1-203ENST00000308482 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
LRRFIP1-203ENST00000308482 CASKIN1Q8WXD9 1431 aa20.01■□□□□ 0.79
LRRFIP1-203ENST00000308482 KDM5BQ9UGL1 1544 aa20.01■□□□□ 0.79
LRRFIP1-203ENST00000308482 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
LRRFIP1-203ENST00000308482 HFM1A2PYH4 1435 aa20■□□□□ 0.79
LRRFIP1-203ENST00000308482 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
LRRFIP1-203ENST00000308482 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
LRRFIP1-203ENST00000308482 NAIPQ13075 1403 aa19.97■□□□□ 0.79
LRRFIP1-203ENST00000308482 B4GALNT3Q6L9W6 998 aa19.96■□□□□ 0.79
LRRFIP1-203ENST00000308482 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
LRRFIP1-203ENST00000308482 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
LRRFIP1-203ENST00000308482 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
LRRFIP1-203ENST00000308482 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
LRRFIP1-203ENST00000308482 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
LRRFIP1-203ENST00000308482 RRP7BPQ9NSQ0 103 aa19.92■□□□□ 0.78
LRRFIP1-203ENST00000308482 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
LRRFIP1-203ENST00000308482 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
LRRFIP1-203ENST00000308482 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
LRRFIP1-203ENST00000308482 SNAPC4Q5SXM2 1469 aa19.89■□□□□ 0.77
LRRFIP1-203ENST00000308482 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
LRRFIP1-203ENST00000308482 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
LRRFIP1-203ENST00000308482 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
LRRFIP1-203ENST00000308482 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
LRRFIP1-203ENST00000308482 CNTLNQ9NXG0 1405 aa19.86■□□□□ 0.77
LRRFIP1-203ENST00000308482 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
LRRFIP1-203ENST00000308482 PRKRIP1Q9H875 184 aaPredicted RBP19.85■□□□□ 0.77
LRRFIP1-203ENST00000308482 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
LRRFIP1-203ENST00000308482 DENND4BO75064 1496 aaPredicted RBP19.84■□□□□ 0.77
LRRFIP1-203ENST00000308482 FOXD1Q16676 465 aa19.83■□□□□ 0.77
LRRFIP1-203ENST00000308482 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.76
LRRFIP1-203ENST00000308482 DEKP35659 375 aaKnown RBP19.82■□□□□ 0.76
LRRFIP1-203ENST00000308482 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
LRRFIP1-203ENST00000308482 CTTNBP2Q8WZ74 1663 aa19.8■□□□□ 0.76
LRRFIP1-203ENST00000308482 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
LRRFIP1-203ENST00000308482 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
LRRFIP1-203ENST00000308482 CCDC7Q96M83 1385 aa19.79■□□□□ 0.76
LRRFIP1-203ENST00000308482 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
LRRFIP1-203ENST00000308482 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
LRRFIP1-203ENST00000308482 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
LRRFIP1-203ENST00000308482 NBR1Q14596 966 aa19.78■□□□□ 0.76
LRRFIP1-203ENST00000308482 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
LRRFIP1-203ENST00000308482 KDM6BO15054 1643 aa19.77■□□□□ 0.76
LRRFIP1-203ENST00000308482 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
LRRFIP1-203ENST00000308482 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
LRRFIP1-203ENST00000308482 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
LRRFIP1-203ENST00000308482 NOP58Q9Y2X3 529 aaKnown RBP19.74■□□□□ 0.75
LRRFIP1-203ENST00000308482 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
LRRFIP1-203ENST00000308482 SUPT6HQ7KZ85 1726 aaKnown RBP19.73■□□□□ 0.75
LRRFIP1-203ENST00000308482 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
LRRFIP1-203ENST00000308482 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
LRRFIP1-203ENST00000308482 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
LRRFIP1-203ENST00000308482 AKNAQ7Z591 1439 aa19.72■□□□□ 0.75
LRRFIP1-203ENST00000308482 CUL7Q14999 1698 aa19.71■□□□□ 0.75
LRRFIP1-203ENST00000308482 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
LRRFIP1-203ENST00000308482 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
LRRFIP1-203ENST00000308482 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
LRRFIP1-203ENST00000308482 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
LRRFIP1-203ENST00000308482 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
LRRFIP1-203ENST00000308482 MYT1LQ9UL68 1186 aa19.69■□□□□ 0.74
LRRFIP1-203ENST00000308482 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
LRRFIP1-203ENST00000308482 SAMD9Q5K651 1589 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms