RNA–Protein interactions for RNA: ENST00000307297.8

PATJ-201, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2 BASIC

Gene PATJ, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-201ENST00000307297 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
PATJ-201ENST00000307297 NUP160Q12769 1436 aa18.16■□□□□ 0.5
PATJ-201ENST00000307297 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
PATJ-201ENST00000307297 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
PATJ-201ENST00000307297 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
PATJ-201ENST00000307297 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
PATJ-201ENST00000307297 UBTFP17480 764 aaKnown RBP18.06■□□□□ 0.48
PATJ-201ENST00000307297 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
PATJ-201ENST00000307297 JPH4Q96JJ6 628 aa17.96■□□□□ 0.47
PATJ-201ENST00000307297 UGGT2Q9NYU1 1516 aa17.96■□□□□ 0.46
PATJ-201ENST00000307297 TNIKQ9UKE5 1360 aa17.95■□□□□ 0.46
PATJ-201ENST00000307297 CARMIL2Q6F5E8 1435 aa17.93■□□□□ 0.46
PATJ-201ENST00000307297 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
PATJ-201ENST00000307297 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
PATJ-201ENST00000307297 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
PATJ-201ENST00000307297 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
PATJ-201ENST00000307297 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
PATJ-201ENST00000307297 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
PATJ-201ENST00000307297 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
PATJ-201ENST00000307297 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
PATJ-201ENST00000307297 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
PATJ-201ENST00000307297 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
PATJ-201ENST00000307297 DISP1Q96F81 1524 aa17.87■□□□□ 0.45
PATJ-201ENST00000307297 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
PATJ-201ENST00000307297 ERCC6L2Q5T890 1561 aa17.86■□□□□ 0.45
PATJ-201ENST00000307297 CEP162Q5TB80 1403 aa17.83■□□□□ 0.44
PATJ-201ENST00000307297 CLIP1P30622 1438 aa17.82■□□□□ 0.44
PATJ-201ENST00000307297 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
PATJ-201ENST00000307297 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
PATJ-201ENST00000307297 ARAP1Q96P48 1450 aa17.77■□□□□ 0.44
PATJ-201ENST00000307297 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
PATJ-201ENST00000307297 TTBK1Q5TCY1 1321 aaPredicted RBP17.76■□□□□ 0.43
PATJ-201ENST00000307297 PTPRGP23470 1445 aa17.75■□□□□ 0.43
PATJ-201ENST00000307297 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
PATJ-201ENST00000307297 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
PATJ-201ENST00000307297 RAPGEF6Q8TEU7 1601 aa17.68■□□□□ 0.42
PATJ-201ENST00000307297 UACAQ9BZF9 1416 aa17.66■□□□□ 0.42
PATJ-201ENST00000307297 ABCA8O94911 1581 aa17.65■□□□□ 0.42
PATJ-201ENST00000307297 ABCC2Q92887 1545 aa17.64■□□□□ 0.42
PATJ-201ENST00000307297 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.41
PATJ-201ENST00000307297 ADCY10Q96PN6 1610 aa17.64■□□□□ 0.41
PATJ-201ENST00000307297 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
PATJ-201ENST00000307297 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
PATJ-201ENST00000307297 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
PATJ-201ENST00000307297 FYCO1Q9BQS8 1478 aa17.59■□□□□ 0.41
PATJ-201ENST00000307297 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
PATJ-201ENST00000307297 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
PATJ-201ENST00000307297 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
PATJ-201ENST00000307297 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
PATJ-201ENST00000307297 ZCCHC11Q5TAX3 1644 aaKnown RBP17.56■□□□□ 0.4
PATJ-201ENST00000307297 NUP153P49790 1475 aaKnown RBP17.54■□□□□ 0.4
PATJ-201ENST00000307297 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
PATJ-201ENST00000307297 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
PATJ-201ENST00000307297 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
PATJ-201ENST00000307297 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
PATJ-201ENST00000307297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
PATJ-201ENST00000307297 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
PATJ-201ENST00000307297 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
PATJ-201ENST00000307297 CDK13Q14004 1512 aaKnown RBP17.48■□□□□ 0.39
PATJ-201ENST00000307297 ATP10BO94823 1461 aa17.47■□□□□ 0.39
PATJ-201ENST00000307297 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
PATJ-201ENST00000307297 CFAP43Q8NDM7 1665 aa17.46■□□□□ 0.39
PATJ-201ENST00000307297 APLP2Q06481 763 aa17.45■□□□□ 0.38
PATJ-201ENST00000307297 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
PATJ-201ENST00000307297 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
PATJ-201ENST00000307297 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
PATJ-201ENST00000307297 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
PATJ-201ENST00000307297 MAP3K1Q13233 1512 aa17.39■□□□□ 0.38
PATJ-201ENST00000307297 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
PATJ-201ENST00000307297 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
PATJ-201ENST00000307297 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
PATJ-201ENST00000307297 KIF14Q15058 1648 aa17.35■□□□□ 0.37
PATJ-201ENST00000307297 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
PATJ-201ENST00000307297 DIP2BQ9P265 1576 aa17.33■□□□□ 0.37
PATJ-201ENST00000307297 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
PATJ-201ENST00000307297 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
PATJ-201ENST00000307297 ABCC10Q5T3U5 1492 aa17.32■□□□□ 0.36
PATJ-201ENST00000307297 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
PATJ-201ENST00000307297 KCNH8Q96L42 1107 aa17.31■□□□□ 0.36
PATJ-201ENST00000307297 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
PATJ-201ENST00000307297 GLI2P10070 1586 aa17.29■□□□□ 0.36
PATJ-201ENST00000307297 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
PATJ-201ENST00000307297 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.35
PATJ-201ENST00000307297 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
PATJ-201ENST00000307297 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
PATJ-201ENST00000307297 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
PATJ-201ENST00000307297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.35
PATJ-201ENST00000307297 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
PATJ-201ENST00000307297 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
PATJ-201ENST00000307297 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
PATJ-201ENST00000307297 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
PATJ-201ENST00000307297 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
PATJ-201ENST00000307297 CDC42BPAQ5VT25 1732 aa17.2■□□□□ 0.34
PATJ-201ENST00000307297 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
PATJ-201ENST00000307297 PREX2Q70Z35 1606 aa17.19■□□□□ 0.34
PATJ-201ENST00000307297 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
PATJ-201ENST00000307297 CFAP74Q9C0B2 1584 aa17.18■□□□□ 0.34
PATJ-201ENST00000307297 TEX14Q8IWB6 1497 aa17.16■□□□□ 0.34
PATJ-201ENST00000307297 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
PATJ-201ENST00000307297 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms