RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
ALCAM-201ENST00000306107 EEA1Q15075 1411 aa19.24■□□□□ 0.67
ALCAM-201ENST00000306107 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
ALCAM-201ENST00000306107 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
ALCAM-201ENST00000306107 SOGA1O94964 1423 aa19.19■□□□□ 0.66
ALCAM-201ENST00000306107 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
ALCAM-201ENST00000306107 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
ALCAM-201ENST00000306107 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
ALCAM-201ENST00000306107 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
ALCAM-201ENST00000306107 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
ALCAM-201ENST00000306107 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
ALCAM-201ENST00000306107 MROH2BQ7Z745 1585 aa19.14■□□□□ 0.65
ALCAM-201ENST00000306107 GGT6Q6P531 493 aa19.14■□□□□ 0.65
ALCAM-201ENST00000306107 NPM2Q86SE8 214 aaKnown RBP19.12■□□□□ 0.65
ALCAM-201ENST00000306107 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
ALCAM-201ENST00000306107 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
ALCAM-201ENST00000306107 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
ALCAM-201ENST00000306107 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
ALCAM-201ENST00000306107 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.64
ALCAM-201ENST00000306107 DDX10Q13206 875 aaKnown RBP19.08■□□□□ 0.64
ALCAM-201ENST00000306107 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
ALCAM-201ENST00000306107 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
ALCAM-201ENST00000306107 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
ALCAM-201ENST00000306107 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
ALCAM-201ENST00000306107 POGKQ9P215 609 aa19.03■□□□□ 0.64
ALCAM-201ENST00000306107 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
ALCAM-201ENST00000306107 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
ALCAM-201ENST00000306107 MYT1Q01538 1121 aa18.98■□□□□ 0.63
ALCAM-201ENST00000306107 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
ALCAM-201ENST00000306107 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
ALCAM-201ENST00000306107 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
ALCAM-201ENST00000306107 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
ALCAM-201ENST00000306107 WDR43Q15061 677 aaKnown RBP eCLIP18.95■□□□□ 0.62
ALCAM-201ENST00000306107 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
ALCAM-201ENST00000306107 FHAD1B1AJZ9 1412 aa18.93■□□□□ 0.62
ALCAM-201ENST00000306107 ARXQ96QS3 562 aa18.91■□□□□ 0.62
ALCAM-201ENST00000306107 KANK1Q14678 1352 aa18.9■□□□□ 0.62
ALCAM-201ENST00000306107 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
ALCAM-201ENST00000306107 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
ALCAM-201ENST00000306107 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
ALCAM-201ENST00000306107 SAFB2Q14151 953 aaKnown RBP eCLIP18.85■□□□□ 0.61
ALCAM-201ENST00000306107 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
ALCAM-201ENST00000306107 KIF3BO15066 747 aa18.83■□□□□ 0.61
ALCAM-201ENST00000306107 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.61
ALCAM-201ENST00000306107 CDCA8Q53HL2 280 aa18.83■□□□□ 0.6
ALCAM-201ENST00000306107 MRS2Q9HD23 443 aa18.82■□□□□ 0.6
ALCAM-201ENST00000306107 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
ALCAM-201ENST00000306107 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
ALCAM-201ENST00000306107 SOX12O15370 315 aa18.81■□□□□ 0.6
ALCAM-201ENST00000306107 STK26Q9P289 416 aa18.79■□□□□ 0.6
ALCAM-201ENST00000306107 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
ALCAM-201ENST00000306107 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
ALCAM-201ENST00000306107 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.591e-9■■□□□ 12
ALCAM-201ENST00000306107 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
ALCAM-201ENST00000306107 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
ALCAM-201ENST00000306107 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
ALCAM-201ENST00000306107 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
ALCAM-201ENST00000306107 WIZO95785 1651 aa18.74■□□□□ 0.59
ALCAM-201ENST00000306107 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
ALCAM-201ENST00000306107 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
ALCAM-201ENST00000306107 PTPRGP23470 1445 aa18.73■□□□□ 0.59
ALCAM-201ENST00000306107 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
ALCAM-201ENST00000306107 PKD2Q13563 968 aa18.7■□□□□ 0.58
ALCAM-201ENST00000306107 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
ALCAM-201ENST00000306107 FMN1Q68DA7 1419 aa18.69■□□□□ 0.58
ALCAM-201ENST00000306107 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
ALCAM-201ENST00000306107 EID1Q9Y6B2 187 aa18.68■□□□□ 0.58
ALCAM-201ENST00000306107 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
ALCAM-201ENST00000306107 NPHP1O15259 732 aa18.67■□□□□ 0.58
ALCAM-201ENST00000306107 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
ALCAM-201ENST00000306107 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
ALCAM-201ENST00000306107 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
ALCAM-201ENST00000306107 FOXD1Q16676 465 aa18.64■□□□□ 0.57
ALCAM-201ENST00000306107 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
ALCAM-201ENST00000306107 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
ALCAM-201ENST00000306107 RAPGEF2Q9Y4G8 1499 aa18.63■□□□□ 0.57
ALCAM-201ENST00000306107 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
ALCAM-201ENST00000306107 NUP155O75694 1391 aa18.62■□□□□ 0.57
ALCAM-201ENST00000306107 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
ALCAM-201ENST00000306107 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
ALCAM-201ENST00000306107 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
ALCAM-201ENST00000306107 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
ALCAM-201ENST00000306107 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
ALCAM-201ENST00000306107 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
ALCAM-201ENST00000306107 RSPH4AQ5TD94 716 aa18.58■□□□□ 0.57
ALCAM-201ENST00000306107 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.57
ALCAM-201ENST00000306107 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
ALCAM-201ENST00000306107 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
ALCAM-201ENST00000306107 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
ALCAM-201ENST00000306107 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.56
ALCAM-201ENST00000306107 NUTM2FA1L443 756 aa18.55■□□□□ 0.56
ALCAM-201ENST00000306107 TMF1P82094 1093 aa18.55■□□□□ 0.56
ALCAM-201ENST00000306107 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
ALCAM-201ENST00000306107 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
ALCAM-201ENST00000306107 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
ALCAM-201ENST00000306107 MYH16Q9H6N6 1097 aa18.53■□□□□ 0.56
ALCAM-201ENST00000306107 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
ALCAM-201ENST00000306107 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
ALCAM-201ENST00000306107 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
ALCAM-201ENST00000306107 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms