RNA–Protein interactions for RNA: ENST00000304760.2

SHE-201, Transcript of Src homology 2 domain containing E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHE, Length 6,243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-201ENST00000304760 NCBP3Q53F19 620 aaKnown RBP23.59■■□□□ 1.37
SHE-201ENST00000304760 NPHP1O15259 732 aa23.59■■□□□ 1.37
SHE-201ENST00000304760 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
SHE-201ENST00000304760 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.37
SHE-201ENST00000304760 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
SHE-201ENST00000304760 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
SHE-201ENST00000304760 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
SHE-201ENST00000304760 MRS2Q9HD23 443 aa23.5■■□□□ 1.35
SHE-201ENST00000304760 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
SHE-201ENST00000304760 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
SHE-201ENST00000304760 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
SHE-201ENST00000304760 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
SHE-201ENST00000304760 LAS1LQ9Y4W2 734 aaKnown RBP23.44■■□□□ 1.34
SHE-201ENST00000304760 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
SHE-201ENST00000304760 GLIPR1L2Q4G1C9 344 aa23.38■■□□□ 1.33
SHE-201ENST00000304760 ZRSR1Q15695 479 aaKnown RBP23.36■■□□□ 1.33
SHE-201ENST00000304760 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
SHE-201ENST00000304760 CLSTN1O94985 981 aa23.31■■□□□ 1.32
SHE-201ENST00000304760 NEUROD2Q15784 382 aa23.3■■□□□ 1.32
SHE-201ENST00000304760 NAP1L2Q9ULW6 460 aaPredicted RBP23.27■■□□□ 1.32
SHE-201ENST00000304760 PTMAP06454 111 aaKnown RBP23.27■■□□□ 1.32
SHE-201ENST00000304760 TRIM44Q96DX7 344 aaPredicted RBP23.25■■□□□ 1.31
SHE-201ENST00000304760 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
SHE-201ENST00000304760 TNNT2P45379 298 aaPredicted RBP23.24■■□□□ 1.31
SHE-201ENST00000304760 PLCB2Q00722 1185 aa23.21■■□□□ 1.31
SHE-201ENST00000304760 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
SHE-201ENST00000304760 CASC1Q6TDU7 716 aa23.2■■□□□ 1.31
SHE-201ENST00000304760 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
SHE-201ENST00000304760 BECN1Q14457 450 aa23.2■■□□□ 1.3
SHE-201ENST00000304760 SOX12O15370 315 aa23.2■■□□□ 1.3
SHE-201ENST00000304760 ISY1Q9ULR0 285 aaKnown RBP23.2■■□□□ 1.3
SHE-201ENST00000304760 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
SHE-201ENST00000304760 DNTTIP2Q5QJE6 756 aaKnown RBP23.19■■□□□ 1.3
SHE-201ENST00000304760 GOLGA2Q08379 1002 aa23.19■■□□□ 1.3
SHE-201ENST00000304760 CFAP53Q96M91 514 aa23.18■■□□□ 1.3
SHE-201ENST00000304760 GOLGA6L22H0YM25 854 aa23.17■■□□□ 1.3
SHE-201ENST00000304760 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
SHE-201ENST00000304760 POGKQ9P215 609 aa23.14■■□□□ 1.29
SHE-201ENST00000304760 FGD1P98174 961 aa23.12■■□□□ 1.29
SHE-201ENST00000304760 MLECQ14165 292 aa23.1■■□□□ 1.29
SHE-201ENST00000304760 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
SHE-201ENST00000304760 MAPK8IP3Q9UPT6 1336 aa23.1■■□□□ 1.29
SHE-201ENST00000304760 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
SHE-201ENST00000304760 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
SHE-201ENST00000304760 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
SHE-201ENST00000304760 KCNJ4P48050 445 aa23.05■■□□□ 1.28
SHE-201ENST00000304760 AMER1Q5JTC6 1135 aaPredicted RBP23.05■■□□□ 1.28
SHE-201ENST00000304760 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
SHE-201ENST00000304760 U2SURPO15042 1029 aaKnown RBP23.04■■□□□ 1.28
SHE-201ENST00000304760 RGS3P49796 1198 aa23■■□□□ 1.27
SHE-201ENST00000304760 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
SHE-201ENST00000304760 MIER1Q8N108 512 aa22.99■■□□□ 1.27
SHE-201ENST00000304760 CARD11Q9BXL7 1154 aa22.95■■□□□ 1.27
SHE-201ENST00000304760 ZNF330Q9Y3S2 320 aaPredicted RBP22.94■■□□□ 1.26
SHE-201ENST00000304760 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
SHE-201ENST00000304760 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
SHE-201ENST00000304760 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
SHE-201ENST00000304760 RTN4Q9NQC3 1192 aaKnown RBP22.88■■□□□ 1.25
SHE-201ENST00000304760 PRM3Q9NNZ6 103 aa22.88■■□□□ 1.25
SHE-201ENST00000304760 CFDP1Q9UEE9 299 aaPredicted RBP22.88■■□□□ 1.25
SHE-201ENST00000304760 GOLGA6L6A8MZA4 724 aa22.87■■□□□ 1.25
SHE-201ENST00000304760 CDCA8Q53HL2 280 aa22.87■■□□□ 1.25
SHE-201ENST00000304760 NAP1L5Q96NT1 182 aaPredicted RBP22.86■■□□□ 1.25
SHE-201ENST00000304760 SPRYD3Q8NCJ5 442 aa22.86■■□□□ 1.25
SHE-201ENST00000304760 CCDC9Q9Y3X0 531 aaKnown RBP22.85■■□□□ 1.25
SHE-201ENST00000304760 SUPT16HQ9Y5B9 1047 aaKnown RBP22.84■■□□□ 1.25
SHE-201ENST00000304760 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.83■■□□□ 1.25
SHE-201ENST00000304760 APBB1O00213 710 aa22.83■■□□□ 1.24
SHE-201ENST00000304760 ANP32EQ9BTT0 268 aa22.82■■□□□ 1.24
SHE-201ENST00000304760 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
SHE-201ENST00000304760 PDE4CQ08493 712 aa22.81■■□□□ 1.24
SHE-201ENST00000304760 GOLGA6L4A6NEF3 574 aa22.8■■□□□ 1.24
SHE-201ENST00000304760 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
SHE-201ENST00000304760 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
SHE-201ENST00000304760 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
SHE-201ENST00000304760 STK26Q9P289 416 aa22.77■■□□□ 1.23
SHE-201ENST00000304760 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
SHE-201ENST00000304760 ZCCHC6Q5VYS8 1495 aaKnown RBP22.76■■□□□ 1.23
SHE-201ENST00000304760 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
SHE-201ENST00000304760 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
SHE-201ENST00000304760 CLIP1P30622 1438 aa22.7■■□□□ 1.22
SHE-201ENST00000304760 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
SHE-201ENST00000304760 RTF1Q92541 710 aaKnown RBP22.7■■□□□ 1.22
SHE-201ENST00000304760 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
SHE-201ENST00000304760 TMX4Q9H1E5 349 aaPredicted RBP22.67■■□□□ 1.22
SHE-201ENST00000304760 NRDCO43847 1150 aa22.66■■□□□ 1.22
SHE-201ENST00000304760 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.21
SHE-201ENST00000304760 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
SHE-201ENST00000304760 G3V3G9 751 aa22.63■■□□□ 1.21
SHE-201ENST00000304760 DCAF8Q5TAQ9 597 aa22.63■■□□□ 1.21
SHE-201ENST00000304760 HSCBQ8IWL3 235 aa22.62■■□□□ 1.21
SHE-201ENST00000304760 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
SHE-201ENST00000304760 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
SHE-201ENST00000304760 MORC1Q86VD1 984 aa22.61■■□□□ 1.21
SHE-201ENST00000304760 MCCP23508 829 aa22.61■■□□□ 1.21
SHE-201ENST00000304760 GGT6Q6P531 493 aa22.61■■□□□ 1.21
SHE-201ENST00000304760 CHMP4BQ9H444 224 aaKnown RBP22.6■■□□□ 1.21
SHE-201ENST00000304760 NOC3LQ8WTT2 800 aaKnown RBP22.59■■□□□ 1.21
SHE-201ENST00000304760 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
SHE-201ENST00000304760 HDGFP51858 240 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms