RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
PPP4R4-201ENST00000304338 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
PPP4R4-201ENST00000304338 MTUS2Q5JR59 1369 aa22.09■■□□□ 1.13
PPP4R4-201ENST00000304338 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
PPP4R4-201ENST00000304338 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
PPP4R4-201ENST00000304338 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
PPP4R4-201ENST00000304338 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
PPP4R4-201ENST00000304338 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
PPP4R4-201ENST00000304338 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
PPP4R4-201ENST00000304338 CHIC2Q9UKJ5 165 aa21.97■■□□□ 1.11
PPP4R4-201ENST00000304338 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
PPP4R4-201ENST00000304338 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
PPP4R4-201ENST00000304338 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
PPP4R4-201ENST00000304338 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.09
PPP4R4-201ENST00000304338 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
PPP4R4-201ENST00000304338 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
PPP4R4-201ENST00000304338 LRRC9Q6ZRR7 1453 aa21.84■■□□□ 1.09
PPP4R4-201ENST00000304338 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.09
PPP4R4-201ENST00000304338 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
PPP4R4-201ENST00000304338 RAB3GAP2Q9H2M9 1393 aa21.82■■□□□ 1.08
PPP4R4-201ENST00000304338 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
PPP4R4-201ENST00000304338 DHX57Q6P158 1386 aaKnown RBP21.8■■□□□ 1.08
PPP4R4-201ENST00000304338 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
PPP4R4-201ENST00000304338 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
PPP4R4-201ENST00000304338 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
PPP4R4-201ENST00000304338 CENPBP07199 599 aaPredicted RBP21.78■■□□□ 1.08
PPP4R4-201ENST00000304338 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
PPP4R4-201ENST00000304338 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
PPP4R4-201ENST00000304338 CUL7Q14999 1698 aa21.75■■□□□ 1.07
PPP4R4-201ENST00000304338 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
PPP4R4-201ENST00000304338 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
PPP4R4-201ENST00000304338 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
PPP4R4-201ENST00000304338 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
PPP4R4-201ENST00000304338 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
PPP4R4-201ENST00000304338 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
PPP4R4-201ENST00000304338 MIER1Q8N108 512 aa21.68■■□□□ 1.06
PPP4R4-201ENST00000304338 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
PPP4R4-201ENST00000304338 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
PPP4R4-201ENST00000304338 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
PPP4R4-201ENST00000304338 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
PPP4R4-201ENST00000304338 CFDP1Q9UEE9 299 aaPredicted RBP21.59■■□□□ 1.05
PPP4R4-201ENST00000304338 FGD6Q6ZV73 1430 aa21.59■■□□□ 1.05
PPP4R4-201ENST00000304338 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
PPP4R4-201ENST00000304338 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
PPP4R4-201ENST00000304338 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
PPP4R4-201ENST00000304338 TONSLQ96HA7 1378 aa21.56■■□□□ 1.04
PPP4R4-201ENST00000304338 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
PPP4R4-201ENST00000304338 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
PPP4R4-201ENST00000304338 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
PPP4R4-201ENST00000304338 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.04
PPP4R4-201ENST00000304338 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
PPP4R4-201ENST00000304338 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
PPP4R4-201ENST00000304338 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
PPP4R4-201ENST00000304338 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
PPP4R4-201ENST00000304338 FOXD1Q16676 465 aa21.5■■□□□ 1.03
PPP4R4-201ENST00000304338 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
PPP4R4-201ENST00000304338 GRIN2AQ12879 1464 aa21.48■■□□□ 1.03
PPP4R4-201ENST00000304338 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
PPP4R4-201ENST00000304338 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
PPP4R4-201ENST00000304338 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
PPP4R4-201ENST00000304338 WDR62O43379 1518 aa21.45■■□□□ 1.02
PPP4R4-201ENST00000304338 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
PPP4R4-201ENST00000304338 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
PPP4R4-201ENST00000304338 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
PPP4R4-201ENST00000304338 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
PPP4R4-201ENST00000304338 EPRSP07814 1512 aaKnown RBP21.43■■□□□ 1.02
PPP4R4-201ENST00000304338 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
PPP4R4-201ENST00000304338 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
PPP4R4-201ENST00000304338 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
PPP4R4-201ENST00000304338 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
PPP4R4-201ENST00000304338 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
PPP4R4-201ENST00000304338 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
PPP4R4-201ENST00000304338 TSPY4P0CV99 314 aa21.39■■□□□ 1.01
PPP4R4-201ENST00000304338 TSPY10P0CW01 314 aa21.39■■□□□ 1.01
PPP4R4-201ENST00000304338 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
PPP4R4-201ENST00000304338 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
PPP4R4-201ENST00000304338 PLB1Q6P1J6 1458 aa21.37■■□□□ 1.01
PPP4R4-201ENST00000304338 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
PPP4R4-201ENST00000304338 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
PPP4R4-201ENST00000304338 EHBP1L1Q8N3D4 1523 aa21.35■■□□□ 1.01
PPP4R4-201ENST00000304338 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
PPP4R4-201ENST00000304338 PTPRGP23470 1445 aa21.34■■□□□ 1.01
PPP4R4-201ENST00000304338 MPHOSPH9Q99550 1183 aa21.33■■□□□ 1.01
PPP4R4-201ENST00000304338 SAMD9Q5K651 1589 aa21.33■■□□□ 1.01
PPP4R4-201ENST00000304338 CFAP43Q8NDM7 1665 aa21.33■■□□□ 1.01
PPP4R4-201ENST00000304338 PPP1R15AO75807 674 aaPredicted RBP21.33■■□□□ 1.01
PPP4R4-201ENST00000304338 HECW1Q76N89 1606 aa21.33■■□□□ 1.01
PPP4R4-201ENST00000304338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 12e-6■■□□□ 13.9
PPP4R4-201ENST00000304338 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
PPP4R4-201ENST00000304338 SUPT6HQ7KZ85 1726 aaKnown RBP21.29■■□□□ 1
PPP4R4-201ENST00000304338 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
PPP4R4-201ENST00000304338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
PPP4R4-201ENST00000304338 DISP1Q96F81 1524 aa21.26■□□□□ 0.99
PPP4R4-201ENST00000304338 NAIPQ13075 1403 aa21.26■□□□□ 0.99
PPP4R4-201ENST00000304338 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
PPP4R4-201ENST00000304338 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
PPP4R4-201ENST00000304338 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
PPP4R4-201ENST00000304338 TIMELESSQ9UNS1 1208 aa21.24■□□□□ 0.99
PPP4R4-201ENST00000304338 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
PPP4R4-201ENST00000304338 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms