RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
TRUB1-201ENST00000298746 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
TRUB1-201ENST00000298746 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
TRUB1-201ENST00000298746 RRBP1Q9P2E9 1410 aaKnown RBP15.78■□□□□ 0.12
TRUB1-201ENST00000298746 B4GALNT3Q6L9W6 998 aa15.75■□□□□ 0.11
TRUB1-201ENST00000298746 WDR97A6NE52 1622 aa15.74■□□□□ 0.11
TRUB1-201ENST00000298746 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
TRUB1-201ENST00000298746 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
TRUB1-201ENST00000298746 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
TRUB1-201ENST00000298746 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.1
TRUB1-201ENST00000298746 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
TRUB1-201ENST00000298746 PPP4R2Q9NY27 417 aa15.69■□□□□ 0.1
TRUB1-201ENST00000298746 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
TRUB1-201ENST00000298746 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
TRUB1-201ENST00000298746 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
TRUB1-201ENST00000298746 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
TRUB1-201ENST00000298746 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
TRUB1-201ENST00000298746 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
TRUB1-201ENST00000298746 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
TRUB1-201ENST00000298746 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
TRUB1-201ENST00000298746 NOP58Q9Y2X3 529 aaKnown RBP15.62■□□□□ 0.09
TRUB1-201ENST00000298746 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
TRUB1-201ENST00000298746 ATAD2BQ9ULI0 1458 aa15.61■□□□□ 0.09
TRUB1-201ENST00000298746 CHIC2Q9UKJ5 165 aa15.59■□□□□ 0.09
TRUB1-201ENST00000298746 NPM2Q86SE8 214 aaKnown RBP15.59■□□□□ 0.09
TRUB1-201ENST00000298746 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
TRUB1-201ENST00000298746 CUX2O14529 1486 aa15.58■□□□□ 0.08
TRUB1-201ENST00000298746 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
TRUB1-201ENST00000298746 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
TRUB1-201ENST00000298746 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRUB1-201ENST00000298746 RRP7BPQ9NSQ0 103 aa15.56■□□□□ 0.08
TRUB1-201ENST00000298746 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
TRUB1-201ENST00000298746 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
TRUB1-201ENST00000298746 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
TRUB1-201ENST00000298746 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.07
TRUB1-201ENST00000298746 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
TRUB1-201ENST00000298746 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
TRUB1-201ENST00000298746 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
TRUB1-201ENST00000298746 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
TRUB1-201ENST00000298746 LRRC9Q6ZRR7 1453 aa15.5■□□□□ 0.07
TRUB1-201ENST00000298746 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
TRUB1-201ENST00000298746 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
TRUB1-201ENST00000298746 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
TRUB1-201ENST00000298746 ARID3CA6NKF2 412 aa15.47■□□□□ 0.07
TRUB1-201ENST00000298746 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
TRUB1-201ENST00000298746 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
TRUB1-201ENST00000298746 FOXD1Q16676 465 aa15.45■□□□□ 0.06
TRUB1-201ENST00000298746 FHOD3Q2V2M9 1422 aa15.44■□□□□ 0.06
TRUB1-201ENST00000298746 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
TRUB1-201ENST00000298746 PRKRIP1Q9H875 184 aaPredicted RBP15.43■□□□□ 0.06
TRUB1-201ENST00000298746 IGF1RP08069 1367 aa15.43■□□□□ 0.06
TRUB1-201ENST00000298746 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
TRUB1-201ENST00000298746 CCDC18Q5T9S5 1454 aa15.42■□□□□ 0.06
TRUB1-201ENST00000298746 CUX1P39880 1505 aa15.41■□□□□ 0.06
TRUB1-201ENST00000298746 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
TRUB1-201ENST00000298746 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
TRUB1-201ENST00000298746 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
TRUB1-201ENST00000298746 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
TRUB1-201ENST00000298746 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
TRUB1-201ENST00000298746 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
TRUB1-201ENST00000298746 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
TRUB1-201ENST00000298746 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
TRUB1-201ENST00000298746 NEFMP07197 916 aa15.35■□□□□ 0.05
TRUB1-201ENST00000298746 DAXXQ9UER7 740 aaPredicted RBP15.35■□□□□ 0.05
TRUB1-201ENST00000298746 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
TRUB1-201ENST00000298746 C11orf95C9JLR9 678 aaPredicted RBP15.33■□□□□ 0.05
TRUB1-201ENST00000298746 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
TRUB1-201ENST00000298746 FGD6Q6ZV73 1430 aa15.32■□□□□ 0.04
TRUB1-201ENST00000298746 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
TRUB1-201ENST00000298746 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
TRUB1-201ENST00000298746 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
TRUB1-201ENST00000298746 CNTLNQ9NXG0 1405 aa15.31■□□□□ 0.04
TRUB1-201ENST00000298746 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
TRUB1-201ENST00000298746 FMN1Q68DA7 1419 aa15.3■□□□□ 0.04
TRUB1-201ENST00000298746 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
TRUB1-201ENST00000298746 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
TRUB1-201ENST00000298746 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
TRUB1-201ENST00000298746 CCDC7Q96M83 1385 aa15.28■□□□□ 0.04
TRUB1-201ENST00000298746 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
TRUB1-201ENST00000298746 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
TRUB1-201ENST00000298746 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
TRUB1-201ENST00000298746 HFM1A2PYH4 1435 aa15.24■□□□□ 0.03
TRUB1-201ENST00000298746 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
TRUB1-201ENST00000298746 NAIPQ13075 1403 aa15.22■□□□□ 0.03
TRUB1-201ENST00000298746 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.034e-6■■■■■ 27.6
TRUB1-201ENST00000298746 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.03
TRUB1-201ENST00000298746 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
TRUB1-201ENST00000298746 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
TRUB1-201ENST00000298746 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
TRUB1-201ENST00000298746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRUB1-201ENST00000298746 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
TRUB1-201ENST00000298746 PDE4AP27815 886 aa15.18■□□□□ 0.02
TRUB1-201ENST00000298746 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
TRUB1-201ENST00000298746 CFTRP13569 1480 aa15.17■□□□□ 0.02
TRUB1-201ENST00000298746 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
TRUB1-201ENST00000298746 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
TRUB1-201ENST00000298746 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
TRUB1-201ENST00000298746 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
TRUB1-201ENST00000298746 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
TRUB1-201ENST00000298746 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms