RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
TTC39B-201ENST00000297615 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
TTC39B-201ENST00000297615 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
TTC39B-201ENST00000297615 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
TTC39B-201ENST00000297615 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
TTC39B-201ENST00000297615 CNGB1Q14028 1251 aaPredicted RBP19.66■□□□□ 0.74
TTC39B-201ENST00000297615 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
TTC39B-201ENST00000297615 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
TTC39B-201ENST00000297615 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
TTC39B-201ENST00000297615 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
TTC39B-201ENST00000297615 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
TTC39B-201ENST00000297615 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
TTC39B-201ENST00000297615 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
TTC39B-201ENST00000297615 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
TTC39B-201ENST00000297615 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
TTC39B-201ENST00000297615 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
TTC39B-201ENST00000297615 FOXD1Q16676 465 aa19.56■□□□□ 0.72
TTC39B-201ENST00000297615 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
TTC39B-201ENST00000297615 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.71
TTC39B-201ENST00000297615 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
TTC39B-201ENST00000297615 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
TTC39B-201ENST00000297615 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
TTC39B-201ENST00000297615 RRBP1Q9P2E9 1410 aaKnown RBP19.43■□□□□ 0.7
TTC39B-201ENST00000297615 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
TTC39B-201ENST00000297615 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
TTC39B-201ENST00000297615 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
TTC39B-201ENST00000297615 SETD5Q9C0A6 1442 aa19.4■□□□□ 0.7
TTC39B-201ENST00000297615 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
TTC39B-201ENST00000297615 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
TTC39B-201ENST00000297615 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
TTC39B-201ENST00000297615 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
TTC39B-201ENST00000297615 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
TTC39B-201ENST00000297615 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
TTC39B-201ENST00000297615 TIAM1Q13009 1591 aa19.36■□□□□ 0.69
TTC39B-201ENST00000297615 ZNF326Q5BKZ1 582 aaKnown RBP19.35■□□□□ 0.69
TTC39B-201ENST00000297615 BCANQ96GW7 911 aa19.35■□□□□ 0.69
TTC39B-201ENST00000297615 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
TTC39B-201ENST00000297615 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
TTC39B-201ENST00000297615 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
TTC39B-201ENST00000297615 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
TTC39B-201ENST00000297615 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
TTC39B-201ENST00000297615 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
TTC39B-201ENST00000297615 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
TTC39B-201ENST00000297615 CDK13Q14004 1512 aaKnown RBP19.22■□□□□ 0.67
TTC39B-201ENST00000297615 FGD6Q6ZV73 1430 aa19.21■□□□□ 0.67
TTC39B-201ENST00000297615 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
TTC39B-201ENST00000297615 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
TTC39B-201ENST00000297615 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
TTC39B-201ENST00000297615 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
TTC39B-201ENST00000297615 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
TTC39B-201ENST00000297615 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
TTC39B-201ENST00000297615 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
TTC39B-201ENST00000297615 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
TTC39B-201ENST00000297615 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
TTC39B-201ENST00000297615 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
TTC39B-201ENST00000297615 FYCO1Q9BQS8 1478 aa19.12■□□□□ 0.65
TTC39B-201ENST00000297615 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
TTC39B-201ENST00000297615 MPHOSPH9Q99550 1183 aa19.09■□□□□ 0.65
TTC39B-201ENST00000297615 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
TTC39B-201ENST00000297615 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
TTC39B-201ENST00000297615 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
TTC39B-201ENST00000297615 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
TTC39B-201ENST00000297615 L3MBTL2Q969R5 705 aa19.07■□□□□ 0.64
TTC39B-201ENST00000297615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.649e-8■□□□□ 10.2
TTC39B-201ENST00000297615 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
TTC39B-201ENST00000297615 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
TTC39B-201ENST00000297615 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
TTC39B-201ENST00000297615 ANP32CO43423 234 aa19.05■□□□□ 0.64
TTC39B-201ENST00000297615 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.649e-7■■■■□ 25.4
TTC39B-201ENST00000297615 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
TTC39B-201ENST00000297615 HSPA5P11021 654 aaKnown RBP19.03■□□□□ 0.64
TTC39B-201ENST00000297615 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
TTC39B-201ENST00000297615 FKBP8Q14318 412 aa19.02■□□□□ 0.64
TTC39B-201ENST00000297615 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
TTC39B-201ENST00000297615 NAIPQ13075 1403 aa19.02■□□□□ 0.63
TTC39B-201ENST00000297615 CUL7Q14999 1698 aa19.02■□□□□ 0.63
TTC39B-201ENST00000297615 ABCA5Q8WWZ7 1642 aa19.01■□□□□ 0.63
TTC39B-201ENST00000297615 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
TTC39B-201ENST00000297615 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
TTC39B-201ENST00000297615 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
TTC39B-201ENST00000297615 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
TTC39B-201ENST00000297615 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
TTC39B-201ENST00000297615 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
TTC39B-201ENST00000297615 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
TTC39B-201ENST00000297615 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
TTC39B-201ENST00000297615 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
TTC39B-201ENST00000297615 C11orf95C9JLR9 678 aaPredicted RBP18.96■□□□□ 0.63
TTC39B-201ENST00000297615 FAM9BQ8IZU0 186 aa18.96■□□□□ 0.63
TTC39B-201ENST00000297615 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
TTC39B-201ENST00000297615 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
TTC39B-201ENST00000297615 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
TTC39B-201ENST00000297615 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
TTC39B-201ENST00000297615 PKD2Q13563 968 aa18.93■□□□□ 0.62
TTC39B-201ENST00000297615 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
TTC39B-201ENST00000297615 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
TTC39B-201ENST00000297615 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
TTC39B-201ENST00000297615 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
TTC39B-201ENST00000297615 KDM6BO15054 1643 aa18.89■□□□□ 0.61
TTC39B-201ENST00000297615 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
TTC39B-201ENST00000297615 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms