RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 RRP7BPQ9NSQ0 103 aa25.04■■□□□ 1.6
ITGB5-201ENST00000296181 RBM19Q9Y4C8 960 aaKnown RBP25.04■■□□□ 1.6
ITGB5-201ENST00000296181 TMC1Q8TDI8 760 aa25.01■■□□□ 1.59
ITGB5-201ENST00000296181 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
ITGB5-201ENST00000296181 EIF4G2P78344 907 aaKnown RBP eCLIP25.01■■□□□ 1.59
ITGB5-201ENST00000296181 BCL11AQ9H165 835 aa24.99■■□□□ 1.59
ITGB5-201ENST00000296181 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
ITGB5-201ENST00000296181 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
ITGB5-201ENST00000296181 CCNB3Q8WWL7 1395 aa24.96■■□□□ 1.59
ITGB5-201ENST00000296181 EIF5BO60841 1220 aaKnown RBP24.94■■□□□ 1.58
ITGB5-201ENST00000296181 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
ITGB5-201ENST00000296181 RUSC2Q8N2Y8 1516 aa24.92■■□□□ 1.58
ITGB5-201ENST00000296181 B4GALNT3Q6L9W6 998 aa24.9■■□□□ 1.58
ITGB5-201ENST00000296181 KDM2AQ9Y2K7 1162 aa24.85■■□□□ 1.57
ITGB5-201ENST00000296181 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
ITGB5-201ENST00000296181 PPP4R2Q9NY27 417 aa24.81■■□□□ 1.56
ITGB5-201ENST00000296181 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
ITGB5-201ENST00000296181 CCER2I3L3R5 266 aa24.74■■□□□ 1.55
ITGB5-201ENST00000296181 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
ITGB5-201ENST00000296181 DHX57Q6P158 1386 aaKnown RBP24.72■■□□□ 1.55
ITGB5-201ENST00000296181 CUX2O14529 1486 aa24.69■■□□□ 1.54
ITGB5-201ENST00000296181 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
ITGB5-201ENST00000296181 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
ITGB5-201ENST00000296181 NOP58Q9Y2X3 529 aaKnown RBP24.65■■□□□ 1.54
ITGB5-201ENST00000296181 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
ITGB5-201ENST00000296181 RTN4Q9NQC3 1192 aaKnown RBP24.64■■□□□ 1.54
ITGB5-201ENST00000296181 ARXQ96QS3 562 aa24.64■■□□□ 1.53
ITGB5-201ENST00000296181 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
ITGB5-201ENST00000296181 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
ITGB5-201ENST00000296181 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
ITGB5-201ENST00000296181 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
ITGB5-201ENST00000296181 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
ITGB5-201ENST00000296181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
ITGB5-201ENST00000296181 HSPA5P11021 654 aaKnown RBP24.58■■□□□ 1.53
ITGB5-201ENST00000296181 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
ITGB5-201ENST00000296181 ATAD2BQ9ULI0 1458 aa24.54■■□□□ 1.52
ITGB5-201ENST00000296181 FOXD1Q16676 465 aa24.52■■□□□ 1.52
ITGB5-201ENST00000296181 RGL3Q3MIN7 710 aa24.49■■□□□ 1.51
ITGB5-201ENST00000296181 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
ITGB5-201ENST00000296181 NEFMP07197 916 aa24.48■■□□□ 1.51
ITGB5-201ENST00000296181 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
ITGB5-201ENST00000296181 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
ITGB5-201ENST00000296181 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
ITGB5-201ENST00000296181 CARD11Q9BXL7 1154 aa24.44■■□□□ 1.5
ITGB5-201ENST00000296181 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
ITGB5-201ENST00000296181 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
ITGB5-201ENST00000296181 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
ITGB5-201ENST00000296181 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.5
ITGB5-201ENST00000296181 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
ITGB5-201ENST00000296181 DDRGK1Q96HY6 314 aa24.34■■□□□ 1.49
ITGB5-201ENST00000296181 CHGAP10645 457 aaKnown RBP24.33■■□□□ 1.49
ITGB5-201ENST00000296181 HSP90AA1P07900 732 aaKnown RBP24.33■■□□□ 1.49
ITGB5-201ENST00000296181 RGS3P49796 1198 aa24.33■■□□□ 1.48
ITGB5-201ENST00000296181 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
ITGB5-201ENST00000296181 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
ITGB5-201ENST00000296181 ERICH6BQ5W0A0 696 aa24.29■■□□□ 1.48
ITGB5-201ENST00000296181 L3MBTL2Q969R5 705 aa24.28■■□□□ 1.48
ITGB5-201ENST00000296181 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
ITGB5-201ENST00000296181 CC2D1BQ5T0F9 858 aaKnown RBP24.26■■□□□ 1.47
ITGB5-201ENST00000296181 FHOD3Q2V2M9 1422 aa24.26■■□□□ 1.47
ITGB5-201ENST00000296181 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
ITGB5-201ENST00000296181 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
ITGB5-201ENST00000296181 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
ITGB5-201ENST00000296181 DCAF11Q8TEB1 546 aa24.19■■□□□ 1.46
ITGB5-201ENST00000296181 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
ITGB5-201ENST00000296181 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
ITGB5-201ENST00000296181 IPO9Q96P70 1041 aaKnown RBP24.15■■□□□ 1.46
ITGB5-201ENST00000296181 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.46
ITGB5-201ENST00000296181 PRKRIP1Q9H875 184 aaPredicted RBP24.13■■□□□ 1.45
ITGB5-201ENST00000296181 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
ITGB5-201ENST00000296181 ANP32BQ92688 251 aaKnown RBP24.13■■□□□ 1.45
ITGB5-201ENST00000296181 BECN1Q14457 450 aa24.12■■□□□ 1.45
ITGB5-201ENST00000296181 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
ITGB5-201ENST00000296181 FANCIQ9NVI1 1328 aa24.11■■□□□ 1.45
ITGB5-201ENST00000296181 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
ITGB5-201ENST00000296181 PKD2Q13563 968 aa24.1■■□□□ 1.45
ITGB5-201ENST00000296181 KIF21BO75037 1637 aa24.1■■□□□ 1.45
ITGB5-201ENST00000296181 IGF1RP08069 1367 aa24.08■■□□□ 1.45
ITGB5-201ENST00000296181 FMN1Q68DA7 1419 aa24.06■■□□□ 1.44
ITGB5-201ENST00000296181 FRAT1Q92837 279 aaPredicted RBP24.05■■□□□ 1.44
ITGB5-201ENST00000296181 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
ITGB5-201ENST00000296181 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.05■■□□□ 1.44
ITGB5-201ENST00000296181 GLIPR1L2Q4G1C9 344 aa24.03■■□□□ 1.44
ITGB5-201ENST00000296181 TCERG1O14776 1098 aaKnown RBP24.01■■□□□ 1.43
ITGB5-201ENST00000296181 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
ITGB5-201ENST00000296181 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
ITGB5-201ENST00000296181 ZBED9Q6R2W3 1325 aa23.97■■□□□ 1.43
ITGB5-201ENST00000296181 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
ITGB5-201ENST00000296181 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
ITGB5-201ENST00000296181 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
ITGB5-201ENST00000296181 NPM1P06748 294 aaKnown RBP eCLIP23.92■■□□□ 1.42
ITGB5-201ENST00000296181 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
ITGB5-201ENST00000296181 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
ITGB5-201ENST00000296181 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
ITGB5-201ENST00000296181 SLC4A3P48751 1232 aa23.91■■□□□ 1.42
ITGB5-201ENST00000296181 SPRYD3Q8NCJ5 442 aa23.91■■□□□ 1.42
ITGB5-201ENST00000296181 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
ITGB5-201ENST00000296181 PLIN1O60240 522 aa23.91■■□□□ 1.42
ITGB5-201ENST00000296181 TRIM44Q96DX7 344 aaPredicted RBP23.9■■□□□ 1.42
ITGB5-201ENST00000296181 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms