RNA–Protein interactions for RNA: ENST00000293618.12

LARP4-201, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 6,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-201ENST00000293618 TRIM44Q96DX7 344 aaPredicted RBP17.96■□□□□ 0.47
LARP4-201ENST00000293618 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
LARP4-201ENST00000293618 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
LARP4-201ENST00000293618 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
LARP4-201ENST00000293618 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
LARP4-201ENST00000293618 MTUS2Q5JR59 1369 aa17.89■□□□□ 0.45
LARP4-201ENST00000293618 GOLGA6L22H0YM25 854 aa17.85■□□□□ 0.45
LARP4-201ENST00000293618 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
LARP4-201ENST00000293618 ARXQ96QS3 562 aa17.85■□□□□ 0.45
LARP4-201ENST00000293618 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
LARP4-201ENST00000293618 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
LARP4-201ENST00000293618 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
LARP4-201ENST00000293618 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.44
LARP4-201ENST00000293618 CHIC2Q9UKJ5 165 aa17.83■□□□□ 0.44
LARP4-201ENST00000293618 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
LARP4-201ENST00000293618 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
LARP4-201ENST00000293618 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
LARP4-201ENST00000293618 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
LARP4-201ENST00000293618 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
LARP4-201ENST00000293618 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
LARP4-201ENST00000293618 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
LARP4-201ENST00000293618 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
LARP4-201ENST00000293618 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
LARP4-201ENST00000293618 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
LARP4-201ENST00000293618 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
LARP4-201ENST00000293618 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
LARP4-201ENST00000293618 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
LARP4-201ENST00000293618 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
LARP4-201ENST00000293618 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
LARP4-201ENST00000293618 NCLP19338 710 aaKnown RBP17.66■□□□□ 0.42
LARP4-201ENST00000293618 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
LARP4-201ENST00000293618 MYH16Q9H6N6 1097 aa17.65■□□□□ 0.42
LARP4-201ENST00000293618 SETD5Q9C0A6 1442 aa17.65■□□□□ 0.42
LARP4-201ENST00000293618 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
LARP4-201ENST00000293618 KIF27Q86VH2 1401 aa17.63■□□□□ 0.41
LARP4-201ENST00000293618 RGS3P49796 1198 aa17.6■□□□□ 0.41
LARP4-201ENST00000293618 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.41
LARP4-201ENST00000293618 CARD11Q9BXL7 1154 aa17.58■□□□□ 0.4
LARP4-201ENST00000293618 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
LARP4-201ENST00000293618 FHAD1B1AJZ9 1412 aa17.58■□□□□ 0.4
LARP4-201ENST00000293618 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
LARP4-201ENST00000293618 FBLN2P98095 1184 aa17.57■□□□□ 0.4
LARP4-201ENST00000293618 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
LARP4-201ENST00000293618 SOGA1O94964 1423 aa17.56■□□□□ 0.4
LARP4-201ENST00000293618 MS4A1P11836 297 aa17.55■□□□□ 0.4
LARP4-201ENST00000293618 DNTTIP2Q5QJE6 756 aaKnown RBP17.54■□□□□ 0.4
LARP4-201ENST00000293618 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
LARP4-201ENST00000293618 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
LARP4-201ENST00000293618 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
LARP4-201ENST00000293618 CHMP4BQ9H444 224 aaKnown RBP17.51■□□□□ 0.39
LARP4-201ENST00000293618 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
LARP4-201ENST00000293618 PTMSP20962 102 aa17.5■□□□□ 0.39
LARP4-201ENST00000293618 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
LARP4-201ENST00000293618 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
LARP4-201ENST00000293618 MSNP26038 577 aaKnown RBP17.49■□□□□ 0.39
LARP4-201ENST00000293618 RCAN3Q9UKA8 241 aa17.49■□□□□ 0.39
LARP4-201ENST00000293618 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
LARP4-201ENST00000293618 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
LARP4-201ENST00000293618 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
LARP4-201ENST00000293618 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
LARP4-201ENST00000293618 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
LARP4-201ENST00000293618 PDE3BQ13370 1112 aa17.46■□□□□ 0.39
LARP4-201ENST00000293618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■□□□□ 9.6
LARP4-201ENST00000293618 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
LARP4-201ENST00000293618 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
LARP4-201ENST00000293618 RALBP1Q15311 655 aa17.44■□□□□ 0.38
LARP4-201ENST00000293618 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
LARP4-201ENST00000293618 SENP3-EIF4A1A0A087X0R7 540 aa17.43■□□□□ 0.38
LARP4-201ENST00000293618 CHGAP10645 457 aaKnown RBP17.42■□□□□ 0.38
LARP4-201ENST00000293618 KANK4Q5T7N3 995 aaPredicted RBP17.42■□□□□ 0.38
LARP4-201ENST00000293618 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
LARP4-201ENST00000293618 GSE1Q14687 1217 aa17.42■□□□□ 0.38
LARP4-201ENST00000293618 GOLGA6L3A6NEY3 463 aa17.4■□□□□ 0.38
LARP4-201ENST00000293618 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
LARP4-201ENST00000293618 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
LARP4-201ENST00000293618 NACADO15069 1562 aa17.39■□□□□ 0.37
LARP4-201ENST00000293618 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
LARP4-201ENST00000293618 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
LARP4-201ENST00000293618 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
LARP4-201ENST00000293618 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
LARP4-201ENST00000293618 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
LARP4-201ENST00000293618 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
LARP4-201ENST00000293618 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
LARP4-201ENST00000293618 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
LARP4-201ENST00000293618 TMF1P82094 1093 aa17.35■□□□□ 0.37
LARP4-201ENST00000293618 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
LARP4-201ENST00000293618 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
LARP4-201ENST00000293618 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
LARP4-201ENST00000293618 PDE4AP27815 886 aa17.34■□□□□ 0.37
LARP4-201ENST00000293618 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
LARP4-201ENST00000293618 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
LARP4-201ENST00000293618 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
LARP4-201ENST00000293618 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
LARP4-201ENST00000293618 SLKQ9H2G2 1235 aaPredicted RBP17.3■□□□□ 0.36
LARP4-201ENST00000293618 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
LARP4-201ENST00000293618 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
LARP4-201ENST00000293618 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
LARP4-201ENST00000293618 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
LARP4-201ENST00000293618 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
LARP4-201ENST00000293618 NRDCO43847 1150 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms