RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
ACTC1-201ENST00000290378 CHIC2Q9UKJ5 165 aa15.42■□□□□ 0.06
ACTC1-201ENST00000290378 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
ACTC1-201ENST00000290378 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
ACTC1-201ENST00000290378 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
ACTC1-201ENST00000290378 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
ACTC1-201ENST00000290378 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
ACTC1-201ENST00000290378 ANP32CO43423 234 aa15.38■□□□□ 0.05
ACTC1-201ENST00000290378 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
ACTC1-201ENST00000290378 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
ACTC1-201ENST00000290378 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
ACTC1-201ENST00000290378 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.04
ACTC1-201ENST00000290378 ANO8Q9HCE9 1232 aaPredicted RBP15.33■□□□□ 0.04
ACTC1-201ENST00000290378 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
ACTC1-201ENST00000290378 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
ACTC1-201ENST00000290378 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
ACTC1-201ENST00000290378 MTUS2Q5JR59 1369 aa15.31■□□□□ 0.04
ACTC1-201ENST00000290378 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
ACTC1-201ENST00000290378 NESP48681 1621 aa15.3■□□□□ 0.04
ACTC1-201ENST00000290378 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
ACTC1-201ENST00000290378 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
ACTC1-201ENST00000290378 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
ACTC1-201ENST00000290378 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
ACTC1-201ENST00000290378 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
ACTC1-201ENST00000290378 RRP7BPQ9NSQ0 103 aa15.25■□□□□ 0.03
ACTC1-201ENST00000290378 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
ACTC1-201ENST00000290378 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
ACTC1-201ENST00000290378 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
ACTC1-201ENST00000290378 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
ACTC1-201ENST00000290378 IGF1RP08069 1367 aa15.17■□□□□ 0.02
ACTC1-201ENST00000290378 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
ACTC1-201ENST00000290378 SIN3AQ96ST3 1273 aa15.16■□□□□ 0.02
ACTC1-201ENST00000290378 CFTRP13569 1480 aa15.16■□□□□ 0.02
ACTC1-201ENST00000290378 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
ACTC1-201ENST00000290378 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
ACTC1-201ENST00000290378 CUX1P39880 1505 aa15.12■□□□□ 0.01
ACTC1-201ENST00000290378 ANP32AP39687 249 aaKnown RBP15.1■□□□□ 0.01
ACTC1-201ENST00000290378 DAXXQ9UER7 740 aaPredicted RBP15.1■□□□□ 0.01
ACTC1-201ENST00000290378 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
ACTC1-201ENST00000290378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
ACTC1-201ENST00000290378 HMGXB3Q12766 1538 aa15.07■□□□□ 0
ACTC1-201ENST00000290378 MSH5O43196 834 aa15.07■□□□□ 0
ACTC1-201ENST00000290378 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
ACTC1-201ENST00000290378 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -0
ACTC1-201ENST00000290378 TONSLQ96HA7 1378 aa15.04■□□□□ -0
ACTC1-201ENST00000290378 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
ACTC1-201ENST00000290378 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
ACTC1-201ENST00000290378 PLEKHD1A6NEE1 506 aa15.02□□□□□ -0.01
ACTC1-201ENST00000290378 PEG3Q9GZU2 1588 aa15.01□□□□□ -0.01
ACTC1-201ENST00000290378 CFDP1Q9UEE9 299 aaPredicted RBP15.01□□□□□ -0.01
ACTC1-201ENST00000290378 TOP2BQ02880 1626 aa15□□□□□ -0.01
ACTC1-201ENST00000290378 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
ACTC1-201ENST00000290378 KIF21BO75037 1637 aa14.99□□□□□ -0.01
ACTC1-201ENST00000290378 FOXD1Q16676 465 aa14.98□□□□□ -0.01
ACTC1-201ENST00000290378 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
ACTC1-201ENST00000290378 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
ACTC1-201ENST00000290378 ARXQ96QS3 562 aa14.97□□□□□ -0.01
ACTC1-201ENST00000290378 KDM2AQ9Y2K7 1162 aa14.97□□□□□ -0.01
ACTC1-201ENST00000290378 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
ACTC1-201ENST00000290378 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
ACTC1-201ENST00000290378 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
ACTC1-201ENST00000290378 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
ACTC1-201ENST00000290378 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
ACTC1-201ENST00000290378 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
ACTC1-201ENST00000290378 MRS2Q9HD23 443 aa14.94□□□□□ -0.02
ACTC1-201ENST00000290378 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
ACTC1-201ENST00000290378 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
ACTC1-201ENST00000290378 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
ACTC1-201ENST00000290378 JPH4Q96JJ6 628 aa14.91□□□□□ -0.02
ACTC1-201ENST00000290378 ARHGAP35Q9NRY4 1499 aa14.9□□□□□ -0.02
ACTC1-201ENST00000290378 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
ACTC1-201ENST00000290378 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
ACTC1-201ENST00000290378 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
ACTC1-201ENST00000290378 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
ACTC1-201ENST00000290378 NEFMP07197 916 aa14.87□□□□□ -0.03
ACTC1-201ENST00000290378 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
ACTC1-201ENST00000290378 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
ACTC1-201ENST00000290378 PHLDB1Q86UU1 1377 aa14.84□□□□□ -0.03
ACTC1-201ENST00000290378 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
ACTC1-201ENST00000290378 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
ACTC1-201ENST00000290378 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
ACTC1-201ENST00000290378 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
ACTC1-201ENST00000290378 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
ACTC1-201ENST00000290378 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
ACTC1-201ENST00000290378 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
ACTC1-201ENST00000290378 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
ACTC1-201ENST00000290378 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
ACTC1-201ENST00000290378 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
ACTC1-201ENST00000290378 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
ACTC1-201ENST00000290378 CCER2I3L3R5 266 aa14.73□□□□□ -0.05
ACTC1-201ENST00000290378 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
ACTC1-201ENST00000290378 LRRC9Q6ZRR7 1453 aa14.71□□□□□ -0.05
ACTC1-201ENST00000290378 EIF4G2P78344 907 aaKnown RBP eCLIP14.71□□□□□ -0.05
ACTC1-201ENST00000290378 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
ACTC1-201ENST00000290378 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
ACTC1-201ENST00000290378 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
ACTC1-201ENST00000290378 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
ACTC1-201ENST00000290378 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
ACTC1-201ENST00000290378 PKD2Q13563 968 aa14.68□□□□□ -0.06
ACTC1-201ENST00000290378 ERICH6BQ5W0A0 696 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms