RNA–Protein interactions for RNA: ENST00000289989.9

C8orf58-201, Transcript of chromosome 8 open reading frame 58, humanhuman

APPRIS P3 TSL 5 BASIC

Gene C8orf58, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf58-201ENST00000289989 CLIP1P30622 1438 aa37.06■■■■□ 3.52
C8orf58-201ENST00000289989 CHMP7Q8WUX9 453 aaPredicted RBP37.05■■■■□ 3.52
C8orf58-201ENST00000289989 FBLN2P98095 1184 aa37.04■■■■□ 3.52
C8orf58-201ENST00000289989 CHD1O14646 1710 aa36.97■■■■□ 3.51
C8orf58-201ENST00000289989 CTTNBP2Q8WZ74 1663 aa36.95■■■■□ 3.51
C8orf58-201ENST00000289989 PPARGC1BQ86YN6 1023 aaKnown RBP36.93■■■■□ 3.5
C8orf58-201ENST00000289989 RANGAP1P46060 587 aaPredicted RBP36.92■■■■□ 3.5
C8orf58-201ENST00000289989 CEP170Q5SW79 1584 aa36.9■■■■□ 3.5
C8orf58-201ENST00000289989 NUP160Q12769 1436 aa36.84■■■■□ 3.49
C8orf58-201ENST00000289989 VPS8Q8N3P4 1428 aa36.83■■■■□ 3.49
C8orf58-201ENST00000289989 KIAA0586Q9BVV6 1533 aa36.76■■■■□ 3.48
C8orf58-201ENST00000289989 IQGAP2Q13576 1575 aa36.74■■■■□ 3.47
C8orf58-201ENST00000289989 ARHGAP35Q9NRY4 1499 aa36.68■■■■□ 3.46
C8orf58-201ENST00000289989 ARAP1Q96P48 1450 aa36.61■■■■□ 3.45
C8orf58-201ENST00000289989 UGGT2Q9NYU1 1516 aa36.57■■■■□ 3.44
C8orf58-201ENST00000289989 SAMD9Q5K651 1589 aa36.56■■■■□ 3.44
C8orf58-201ENST00000289989 P3H3Q8IVL6 736 aa36.56■■■■□ 3.44
C8orf58-201ENST00000289989 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
C8orf58-201ENST00000289989 EFCAB5A4FU69 1503 aa36.52■■■■□ 3.44
C8orf58-201ENST00000289989 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
C8orf58-201ENST00000289989 APLP2Q06481 763 aa36.5■■■■□ 3.43
C8orf58-201ENST00000289989 TTBK1Q5TCY1 1321 aaPredicted RBP36.5■■■■□ 3.43
C8orf58-201ENST00000289989 DISP1Q96F81 1524 aa36.48■■■■□ 3.43
C8orf58-201ENST00000289989 FHOD3Q2V2M9 1422 aa36.48■■■■□ 3.43
C8orf58-201ENST00000289989 ZEB1P37275 1124 aaPredicted RBP36.45■■■■□ 3.43
C8orf58-201ENST00000289989 OSCARQ8IYS5 282 aa36.42■■■■□ 3.42
C8orf58-201ENST00000289989 SHROOM2Q13796 1616 aa36.42■■■■□ 3.42
C8orf58-201ENST00000289989 KIAA0556O60303 1618 aa36.41■■■■□ 3.42
C8orf58-201ENST00000289989 PRG4Q92954 1404 aaPredicted RBP36.34■■■■□ 3.41
C8orf58-201ENST00000289989 ERCC6L2Q5T890 1561 aa36.31■■■■□ 3.4
C8orf58-201ENST00000289989 CARMIL2Q6F5E8 1435 aa36.26■■■■□ 3.39
C8orf58-201ENST00000289989 FMN1Q68DA7 1419 aa36.18■■■■□ 3.38
C8orf58-201ENST00000289989 PCF11O94913 1555 aaKnown RBP36.17■■■■□ 3.38
C8orf58-201ENST00000289989 CASKIN1Q8WXD9 1431 aa36.08■■■■□ 3.37
C8orf58-201ENST00000289989 MAP3K1Q13233 1512 aa36.08■■■■□ 3.37
C8orf58-201ENST00000289989 KANK4Q5T7N3 995 aaPredicted RBP36.05■■■■□ 3.36
C8orf58-201ENST00000289989 FYCO1Q9BQS8 1478 aa36.04■■■■□ 3.36
C8orf58-201ENST00000289989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.03■■■■□ 3.36
C8orf58-201ENST00000289989 PTPRGP23470 1445 aa36.03■■■■□ 3.36
C8orf58-201ENST00000289989 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
C8orf58-201ENST00000289989 ATP1B4Q9UN42 357 aaPredicted RBP36.01■■■■□ 3.35
C8orf58-201ENST00000289989 LRRIQ1Q96JM4 1722 aa35.99■■■■□ 3.35
C8orf58-201ENST00000289989 CCER1Q8TC90 406 aaPredicted RBP35.99■■■■□ 3.35
C8orf58-201ENST00000289989 TIAM1Q13009 1591 aa35.96■■■■□ 3.35
C8orf58-201ENST00000289989 RAPGEF6Q8TEU7 1601 aa35.96■■■■□ 3.35
C8orf58-201ENST00000289989 ABCA8O94911 1581 aa35.93■■■■□ 3.34
C8orf58-201ENST00000289989 HECW1Q76N89 1606 aa35.9■■■■□ 3.34
C8orf58-201ENST00000289989 NUP153P49790 1475 aaKnown RBP35.9■■■■□ 3.34
C8orf58-201ENST00000289989 ARHGEF11O15085 1522 aa35.89■■■■□ 3.34
C8orf58-201ENST00000289989 ARID3CA6NKF2 412 aa35.86■■■■□ 3.33
C8orf58-201ENST00000289989 RRBP1Q9P2E9 1410 aaKnown RBP35.85■■■■□ 3.33
C8orf58-201ENST00000289989 HNRNPUL2Q1KMD3 747 aaKnown RBP35.84■■■■□ 3.33
C8orf58-201ENST00000289989 CFAP43Q8NDM7 1665 aa35.84■■■■□ 3.33
C8orf58-201ENST00000289989 EPRSP07814 1512 aaKnown RBP35.83■■■■□ 3.33
C8orf58-201ENST00000289989 UACAQ9BZF9 1416 aa35.82■■■■□ 3.32
C8orf58-201ENST00000289989 CDK13Q14004 1512 aaKnown RBP35.81■■■■□ 3.32
C8orf58-201ENST00000289989 LRRC9Q6ZRR7 1453 aa35.8■■■■□ 3.32
C8orf58-201ENST00000289989 RIMBP3CA6NJZ7 1639 aa35.77■■■■□ 3.32
C8orf58-201ENST00000289989 RIMBP3BA6NNM3 1639 aa35.77■■■■□ 3.32
C8orf58-201ENST00000289989 RIMBP3Q9UFD9 1639 aa35.77■■■■□ 3.32
C8orf58-201ENST00000289989 CCDC18Q5T9S5 1454 aa35.74■■■■□ 3.31
C8orf58-201ENST00000289989 ABCC2Q92887 1545 aa35.73■■■■□ 3.31
C8orf58-201ENST00000289989 MAGI3Q5TCQ9 1506 aa35.69■■■■□ 3.3
C8orf58-201ENST00000289989 ATP10BO94823 1461 aa35.69■■■■□ 3.3
C8orf58-201ENST00000289989 CCNB3Q8WWL7 1395 aa35.68■■■■□ 3.3
C8orf58-201ENST00000289989 UHRF1BP1LA0JNW5 1464 aa35.67■■■■□ 3.3
C8orf58-201ENST00000289989 ADCY10Q96PN6 1610 aa35.66■■■■□ 3.3
C8orf58-201ENST00000289989 MTUS2Q5JR59 1369 aa35.56■■■■□ 3.28
C8orf58-201ENST00000289989 KDM5BQ9UGL1 1544 aa35.55■■■■□ 3.28
C8orf58-201ENST00000289989 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
C8orf58-201ENST00000289989 ZCCHC11Q5TAX3 1644 aaKnown RBP35.53■■■■□ 3.28
C8orf58-201ENST00000289989 EHBP1L1Q8N3D4 1523 aa35.51■■■■□ 3.28
C8orf58-201ENST00000289989 PHLDB1Q86UU1 1377 aa35.51■■■■□ 3.27
C8orf58-201ENST00000289989 CDK11AQ9UQ88 783 aaPredicted RBP35.44■■■■□ 3.26
C8orf58-201ENST00000289989 TROQ12816 1431 aaPredicted RBP35.43■■■■□ 3.26
C8orf58-201ENST00000289989 PLEKHD1A6NEE1 506 aa35.4■■■■□ 3.26
C8orf58-201ENST00000289989 NCOA2Q15596 1464 aa35.39■■■■□ 3.26
C8orf58-201ENST00000289989 SUPT6HQ7KZ85 1726 aaKnown RBP35.39■■■■□ 3.26
C8orf58-201ENST00000289989 KIF14Q15058 1648 aa35.37■■■■□ 3.25
C8orf58-201ENST00000289989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.33■■■■□ 3.25
C8orf58-201ENST00000289989 CLSPNQ9HAW4 1339 aa35.29■■■■□ 3.24
C8orf58-201ENST00000289989 NPM1P06748 294 aaKnown RBP eCLIP35.25■■■■□ 3.23
C8orf58-201ENST00000289989 DNAJC5Q9H3Z4 198 aa35.25■■■■□ 3.23
C8orf58-201ENST00000289989 DHX57Q6P158 1386 aaKnown RBP35.25■■■■□ 3.23
C8orf58-201ENST00000289989 ITGAEP38570 1179 aa35.24■■■■□ 3.23
C8orf58-201ENST00000289989 ASXL2Q76L83 1435 aa35.24■■■■□ 3.23
C8orf58-201ENST00000289989 FAM50AQ14320 339 aaKnown RBP35.23■■■■□ 3.23
C8orf58-201ENST00000289989 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
C8orf58-201ENST00000289989 ABCC10Q5T3U5 1492 aa35.21■■■■□ 3.23
C8orf58-201ENST00000289989 KCNH8Q96L42 1107 aa35.21■■■■□ 3.23
C8orf58-201ENST00000289989 WDR7Q9Y4E6 1490 aa35.21■■■■□ 3.23
C8orf58-201ENST00000289989 MYOM3Q5VTT5 1437 aa35.18■■■■□ 3.22
C8orf58-201ENST00000289989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.15■■■■□ 3.22
C8orf58-201ENST00000289989 TTC37Q6PGP7 1564 aa35.13■■■■□ 3.21
C8orf58-201ENST00000289989 SETD5Q9C0A6 1442 aa35.13■■■■□ 3.21
C8orf58-201ENST00000289989 GPATCH8Q9UKJ3 1502 aaKnown RBP35.12■■■■□ 3.21
C8orf58-201ENST00000289989 RAB3GAP2Q9H2M9 1393 aa35.11■■■■□ 3.21
C8orf58-201ENST00000289989 MAPKBP1O60336 1514 aa35.1■■■■□ 3.21
C8orf58-201ENST00000289989 CDC42BPAQ5VT25 1732 aa35.09■■■■□ 3.21
C8orf58-201ENST00000289989 ITSN2Q9NZM3 1697 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms