RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
HMBOX1-201ENST00000287701 ANP32CO43423 234 aa13.63□□□□□ -0.23
HMBOX1-201ENST00000287701 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
HMBOX1-201ENST00000287701 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
HMBOX1-201ENST00000287701 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
HMBOX1-201ENST00000287701 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
HMBOX1-201ENST00000287701 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
HMBOX1-201ENST00000287701 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
HMBOX1-201ENST00000287701 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
HMBOX1-201ENST00000287701 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
HMBOX1-201ENST00000287701 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
HMBOX1-201ENST00000287701 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 IPO9Q96P70 1041 aaKnown RBP13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 NBR1Q14596 966 aa13.55□□□□□ -0.24
HMBOX1-201ENST00000287701 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
HMBOX1-201ENST00000287701 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
HMBOX1-201ENST00000287701 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
HMBOX1-201ENST00000287701 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
HMBOX1-201ENST00000287701 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
HMBOX1-201ENST00000287701 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.24
HMBOX1-201ENST00000287701 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
HMBOX1-201ENST00000287701 RAB3GAP2Q9H2M9 1393 aa13.52□□□□□ -0.25
HMBOX1-201ENST00000287701 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
HMBOX1-201ENST00000287701 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
HMBOX1-201ENST00000287701 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
HMBOX1-201ENST00000287701 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
HMBOX1-201ENST00000287701 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
HMBOX1-201ENST00000287701 MAP3K1Q13233 1512 aa13.46□□□□□ -0.25
HMBOX1-201ENST00000287701 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMBOX1-201ENST00000287701 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
HMBOX1-201ENST00000287701 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
HMBOX1-201ENST00000287701 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
HMBOX1-201ENST00000287701 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
HMBOX1-201ENST00000287701 PRXQ9BXM0 1461 aa13.39□□□□□ -0.27
HMBOX1-201ENST00000287701 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
HMBOX1-201ENST00000287701 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
HMBOX1-201ENST00000287701 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
HMBOX1-201ENST00000287701 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
HMBOX1-201ENST00000287701 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
HMBOX1-201ENST00000287701 PPM1GO15355 546 aaPredicted RBP13.37□□□□□ -0.27
HMBOX1-201ENST00000287701 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
HMBOX1-201ENST00000287701 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
HMBOX1-201ENST00000287701 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
HMBOX1-201ENST00000287701 NESP48681 1621 aa13.34□□□□□ -0.27
HMBOX1-201ENST00000287701 EIF5BO60841 1220 aaKnown RBP13.34□□□□□ -0.27
HMBOX1-201ENST00000287701 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
HMBOX1-201ENST00000287701 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
HMBOX1-201ENST00000287701 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
HMBOX1-201ENST00000287701 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
HMBOX1-201ENST00000287701 NEFMP07197 916 aa13.3□□□□□ -0.28
HMBOX1-201ENST00000287701 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
HMBOX1-201ENST00000287701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
HMBOX1-201ENST00000287701 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
HMBOX1-201ENST00000287701 WDR62O43379 1518 aa13.28□□□□□ -0.28
HMBOX1-201ENST00000287701 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
HMBOX1-201ENST00000287701 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
HMBOX1-201ENST00000287701 GSE1Q14687 1217 aa13.28□□□□□ -0.28
HMBOX1-201ENST00000287701 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
HMBOX1-201ENST00000287701 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
HMBOX1-201ENST00000287701 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
HMBOX1-201ENST00000287701 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
HMBOX1-201ENST00000287701 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
HMBOX1-201ENST00000287701 MS4A1P11836 297 aa13.22□□□□□ -0.29
HMBOX1-201ENST00000287701 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
HMBOX1-201ENST00000287701 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
HMBOX1-201ENST00000287701 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
HMBOX1-201ENST00000287701 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
HMBOX1-201ENST00000287701 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
HMBOX1-201ENST00000287701 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
HMBOX1-201ENST00000287701 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
HMBOX1-201ENST00000287701 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
HMBOX1-201ENST00000287701 BACH2Q9BYV9 841 aa13.16□□□□□ -0.3
HMBOX1-201ENST00000287701 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
HMBOX1-201ENST00000287701 LAS1LQ9Y4W2 734 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-201ENST00000287701 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
HMBOX1-201ENST00000287701 PDE4AP27815 886 aa13.14□□□□□ -0.31
HMBOX1-201ENST00000287701 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
HMBOX1-201ENST00000287701 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
HMBOX1-201ENST00000287701 RANGAP1P46060 587 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-201ENST00000287701 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-201ENST00000287701 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
HMBOX1-201ENST00000287701 NFKBIBQ15653 356 aa13.12□□□□□ -0.31
HMBOX1-201ENST00000287701 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
HMBOX1-201ENST00000287701 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
HMBOX1-201ENST00000287701 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
HMBOX1-201ENST00000287701 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
HMBOX1-201ENST00000287701 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
HMBOX1-201ENST00000287701 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
HMBOX1-201ENST00000287701 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
HMBOX1-201ENST00000287701 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
HMBOX1-201ENST00000287701 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■□□ 15.8
HMBOX1-201ENST00000287701 RRP9O43818 475 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms