RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
CXCL13-201ENST00000286758 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
CXCL13-201ENST00000286758 DIEXFQ68CQ4 756 aaKnown RBP16.03■□□□□ 0.16
CXCL13-201ENST00000286758 C19orf67A6NJJ6 358 aa16.02■□□□□ 0.16
CXCL13-201ENST00000286758 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
CXCL13-201ENST00000286758 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
CXCL13-201ENST00000286758 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
CXCL13-201ENST00000286758 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
CXCL13-201ENST00000286758 GABBR2O75899 941 aa15.89■□□□□ 0.13
CXCL13-201ENST00000286758 PKNOX2Q96KN3 472 aa15.81■□□□□ 0.12
CXCL13-201ENST00000286758 CUX2O14529 1486 aa15.8■□□□□ 0.12
CXCL13-201ENST00000286758 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
CXCL13-201ENST00000286758 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
CXCL13-201ENST00000286758 LHX8Q68G74 356 aa15.73■□□□□ 0.11
CXCL13-201ENST00000286758 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
CXCL13-201ENST00000286758 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
CXCL13-201ENST00000286758 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
CXCL13-201ENST00000286758 NEFLP07196 543 aa15.68■□□□□ 0.1
CXCL13-201ENST00000286758 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
CXCL13-201ENST00000286758 SOCS7O14512 581 aa15.66■□□□□ 0.1
CXCL13-201ENST00000286758 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
CXCL13-201ENST00000286758 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
CXCL13-201ENST00000286758 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
CXCL13-201ENST00000286758 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
CXCL13-201ENST00000286758 CLCN6P51797 869 aa15.61■□□□□ 0.09
CXCL13-201ENST00000286758 LMTK3Q96Q04 1460 aa15.59■□□□□ 0.09
CXCL13-201ENST00000286758 DEKP35659 375 aaKnown RBP15.57■□□□□ 0.08
CXCL13-201ENST00000286758 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
CXCL13-201ENST00000286758 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
CXCL13-201ENST00000286758 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
CXCL13-201ENST00000286758 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
CXCL13-201ENST00000286758 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
CXCL13-201ENST00000286758 DCBLD2Q96PD2 775 aa15.48■□□□□ 0.07
CXCL13-201ENST00000286758 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
CXCL13-201ENST00000286758 ARXQ96QS3 562 aa15.43■□□□□ 0.06
CXCL13-201ENST00000286758 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
CXCL13-201ENST00000286758 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
CXCL13-201ENST00000286758 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
CXCL13-201ENST00000286758 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
CXCL13-201ENST00000286758 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
CXCL13-201ENST00000286758 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
CXCL13-201ENST00000286758 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
CXCL13-201ENST00000286758 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
CXCL13-201ENST00000286758 ILDR2Q71H61 639 aa15.3■□□□□ 0.04
CXCL13-201ENST00000286758 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
CXCL13-201ENST00000286758 MIER1Q8N108 512 aa15.29■□□□□ 0.04
CXCL13-201ENST00000286758 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.04
CXCL13-201ENST00000286758 CCDC136Q96JN2 1154 aa15.25■□□□□ 0.03
CXCL13-201ENST00000286758 GALR2O43603 387 aaPredicted RBP15.22■□□□□ 0.03
CXCL13-201ENST00000286758 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CXCL13-201ENST00000286758 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
CXCL13-201ENST00000286758 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
CXCL13-201ENST00000286758 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
CXCL13-201ENST00000286758 PDE4CQ08493 712 aa15.19■□□□□ 0.02
CXCL13-201ENST00000286758 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
CXCL13-201ENST00000286758 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
CXCL13-201ENST00000286758 FGD1P98174 961 aa15.12■□□□□ 0.01
CXCL13-201ENST00000286758 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
CXCL13-201ENST00000286758 USP35Q9P2H5 1018 aa15.11■□□□□ 0.01
CXCL13-201ENST00000286758 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
CXCL13-201ENST00000286758 TAF7LQ5H9L4 462 aa15.08■□□□□ 0
CXCL13-201ENST00000286758 ZMYND15Q9H091 742 aa15.08■□□□□ 0
CXCL13-201ENST00000286758 PLSCR2Q9NRY7 297 aa15.08■□□□□ 0
CXCL13-201ENST00000286758 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.08■□□□□ 0
CXCL13-201ENST00000286758 FBXO41Q8TF61 875 aa15.06■□□□□ 0
CXCL13-201ENST00000286758 NOP58Q9Y2X3 529 aaKnown RBP15.06■□□□□ 0
CXCL13-201ENST00000286758 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
CXCL13-201ENST00000286758 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
CXCL13-201ENST00000286758 OTUD5Q96G74 571 aa15.02■□□□□ -0
CXCL13-201ENST00000286758 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
CXCL13-201ENST00000286758 AAMPQ13685 434 aa15□□□□□ -0.01
CXCL13-201ENST00000286758 FKBP8Q14318 412 aa14.98□□□□□ -0.01
CXCL13-201ENST00000286758 IL27Q8NEV9 243 aa14.98□□□□□ -0.01
CXCL13-201ENST00000286758 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
CXCL13-201ENST00000286758 RRP9O43818 475 aaKnown RBP14.97□□□□□ -0.01
CXCL13-201ENST00000286758 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
CXCL13-201ENST00000286758 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
CXCL13-201ENST00000286758 FAM43AQ8N2R8 423 aa14.93□□□□□ -0.02
CXCL13-201ENST00000286758 MS4A3Q96HJ5 214 aa14.92□□□□□ -0.02
CXCL13-201ENST00000286758 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
CXCL13-201ENST00000286758 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
CXCL13-201ENST00000286758 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
CXCL13-201ENST00000286758 SLC39A7Q92504 469 aa14.89□□□□□ -0.03
CXCL13-201ENST00000286758 METRNQ9UJH8 293 aa14.89□□□□□ -0.03
CXCL13-201ENST00000286758 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
CXCL13-201ENST00000286758 C7P10643 843 aa14.87□□□□□ -0.03
CXCL13-201ENST00000286758 RBM10P98175 930 aaKnown RBP14.87□□□□□ -0.03
CXCL13-201ENST00000286758 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
CXCL13-201ENST00000286758 DISP3Q9P2K9 1392 aa14.86□□□□□ -0.03
CXCL13-201ENST00000286758 ATMINO43313 823 aaPredicted RBP14.85□□□□□ -0.03
CXCL13-201ENST00000286758 POTEMA6NI47 508 aa14.83□□□□□ -0.04
CXCL13-201ENST00000286758 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.04
CXCL13-201ENST00000286758 CENPJQ9HC77 1338 aaPredicted RBP14.82□□□□□ -0.04
CXCL13-201ENST00000286758 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
CXCL13-201ENST00000286758 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
CXCL13-201ENST00000286758 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
CXCL13-201ENST00000286758 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
CXCL13-201ENST00000286758 NCLP19338 710 aaKnown RBP14.8□□□□□ -0.04
CXCL13-201ENST00000286758 ANP32AP39687 249 aaKnown RBP14.8□□□□□ -0.04
CXCL13-201ENST00000286758 MAMSTRQ6ZN01 415 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms