RNA–Protein interactions for RNA: ENST00000282588.6

ITGA1-201, Transcript of integrin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA1, Length 10,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-201ENST00000282588 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
ITGA1-201ENST00000282588 CNKSR2Q8WXI2 1034 aa9.6□□□□□ -0.87
ITGA1-201ENST00000282588 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
ITGA1-201ENST00000282588 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
ITGA1-201ENST00000282588 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
ITGA1-201ENST00000282588 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
ITGA1-201ENST00000282588 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
ITGA1-201ENST00000282588 NBR1Q14596 966 aa9.56□□□□□ -0.88
ITGA1-201ENST00000282588 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
ITGA1-201ENST00000282588 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
ITGA1-201ENST00000282588 HSP90AA1P07900 732 aaKnown RBP9.55□□□□□ -0.88
ITGA1-201ENST00000282588 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
ITGA1-201ENST00000282588 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
ITGA1-201ENST00000282588 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
ITGA1-201ENST00000282588 KDM2AQ9Y2K7 1162 aa9.52□□□□□ -0.89
ITGA1-201ENST00000282588 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
ITGA1-201ENST00000282588 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
ITGA1-201ENST00000282588 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
ITGA1-201ENST00000282588 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
ITGA1-201ENST00000282588 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
ITGA1-201ENST00000282588 EVA1CP58658 441 aa9.45□□□□□ -0.9
ITGA1-201ENST00000282588 LAS1LQ9Y4W2 734 aaKnown RBP9.44□□□□□ -0.9
ITGA1-201ENST00000282588 NAP1L2Q9ULW6 460 aaPredicted RBP9.44□□□□□ -0.9
ITGA1-201ENST00000282588 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
ITGA1-201ENST00000282588 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
ITGA1-201ENST00000282588 POGKQ9P215 609 aa9.41□□□□□ -0.9
ITGA1-201ENST00000282588 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
ITGA1-201ENST00000282588 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
ITGA1-201ENST00000282588 PDE4CQ08493 712 aa9.41□□□□□ -0.9
ITGA1-201ENST00000282588 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
ITGA1-201ENST00000282588 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
ITGA1-201ENST00000282588 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
ITGA1-201ENST00000282588 TSPY4P0CV99 314 aa9.38□□□□□ -0.91
ITGA1-201ENST00000282588 TSPY10P0CW01 314 aa9.38□□□□□ -0.91
ITGA1-201ENST00000282588 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
ITGA1-201ENST00000282588 SYTL4Q96C24 671 aaPredicted RBP9.37□□□□□ -0.91
ITGA1-201ENST00000282588 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
ITGA1-201ENST00000282588 RAD21O60216 631 aa9.36□□□□□ -0.91
ITGA1-201ENST00000282588 VPS53Q5VIR6 699 aa9.36□□□□□ -0.91
ITGA1-201ENST00000282588 MYH16Q9H6N6 1097 aa9.36□□□□□ -0.91
ITGA1-201ENST00000282588 OS9Q13438 667 aaPredicted RBP9.35□□□□□ -0.91
ITGA1-201ENST00000282588 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
ITGA1-201ENST00000282588 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
ITGA1-201ENST00000282588 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
ITGA1-201ENST00000282588 GRM1Q13255 1194 aa9.35□□□□□ -0.91
ITGA1-201ENST00000282588 RGL3Q3MIN7 710 aa9.34□□□□□ -0.91
ITGA1-201ENST00000282588 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
ITGA1-201ENST00000282588 SAFB2Q14151 953 aaKnown RBP eCLIP9.34□□□□□ -0.91
ITGA1-201ENST00000282588 CCAR1Q8IX12 1150 aaKnown RBP9.34□□□□□ -0.91
ITGA1-201ENST00000282588 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
ITGA1-201ENST00000282588 CTDP1Q9Y5B0 961 aaPredicted RBP9.33□□□□□ -0.92
ITGA1-201ENST00000282588 PPM1FP49593 454 aaPredicted RBP9.32□□□□□ -0.92
ITGA1-201ENST00000282588 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
ITGA1-201ENST00000282588 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
ITGA1-201ENST00000282588 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
ITGA1-201ENST00000282588 NUTM2FA1L443 756 aa9.3□□□□□ -0.92
ITGA1-201ENST00000282588 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
ITGA1-201ENST00000282588 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
ITGA1-201ENST00000282588 NUTM2DQ5VT03 806 aaPredicted RBP9.29□□□□□ -0.92
ITGA1-201ENST00000282588 ANP32CO43423 234 aa9.29□□□□□ -0.92
ITGA1-201ENST00000282588 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
ITGA1-201ENST00000282588 FGD1P98174 961 aa9.29□□□□□ -0.92
ITGA1-201ENST00000282588 STK26Q9P289 416 aa9.29□□□□□ -0.92
ITGA1-201ENST00000282588 GGT6Q6P531 493 aa9.28□□□□□ -0.92
ITGA1-201ENST00000282588 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.92
ITGA1-201ENST00000282588 C16orf71Q8IYS4 520 aaPredicted RBP9.27□□□□□ -0.92
ITGA1-201ENST00000282588 IBSPP21815 317 aaPredicted RBP9.27□□□□□ -0.93
ITGA1-201ENST00000282588 ZRSR1Q15695 479 aaKnown RBP9.27□□□□□ -0.93
ITGA1-201ENST00000282588 ANP32BQ92688 251 aaKnown RBP9.27□□□□□ -0.93
ITGA1-201ENST00000282588 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
ITGA1-201ENST00000282588 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
ITGA1-201ENST00000282588 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
ITGA1-201ENST00000282588 PLCD3Q8N3E9 789 aa9.24□□□□□ -0.93
ITGA1-201ENST00000282588 LOC105371045A0A1W2PR82 267 aa9.24□□□□□ -0.93
ITGA1-201ENST00000282588 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
ITGA1-201ENST00000282588 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
ITGA1-201ENST00000282588 TCEAL9Q9UHQ7 104 aa9.23□□□□□ -0.93
ITGA1-201ENST00000282588 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
ITGA1-201ENST00000282588 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
ITGA1-201ENST00000282588 UPF2Q9HAU5 1272 aaKnown RBP9.21□□□□□ -0.93
ITGA1-201ENST00000282588 KCNJ4P48050 445 aa9.21□□□□□ -0.93
ITGA1-201ENST00000282588 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.94
ITGA1-201ENST00000282588 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
ITGA1-201ENST00000282588 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
ITGA1-201ENST00000282588 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
ITGA1-201ENST00000282588 U2SURPO15042 1029 aaKnown RBP9.17□□□□□ -0.94
ITGA1-201ENST00000282588 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
ITGA1-201ENST00000282588 PAF1Q8N7H5 531 aa9.16□□□□□ -0.94
ITGA1-201ENST00000282588 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
ITGA1-201ENST00000282588 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.94
ITGA1-201ENST00000282588 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.94
ITGA1-201ENST00000282588 MARCH6O60337 910 aa9.14□□□□□ -0.95
ITGA1-201ENST00000282588 GNL2Q13823 731 aaKnown RBP9.14□□□□□ -0.95
ITGA1-201ENST00000282588 NGDNQ8NEJ9 315 aaKnown RBP9.14□□□□□ -0.95
ITGA1-201ENST00000282588 NGEFQ8N5V2 710 aa9.13□□□□□ -0.95
ITGA1-201ENST00000282588 NCLP19338 710 aaKnown RBP9.12□□□□□ -0.95
ITGA1-201ENST00000282588 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
ITGA1-201ENST00000282588 ATF3P18847 181 aa9.11□□□□□ -0.95
ITGA1-201ENST00000282588 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
ITGA1-201ENST00000282588 CHMP4BP1P59074 171 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms