RNA–Protein interactions for RNA: ENST00000279839.7

CWC15-201, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CWC15, Length 1,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-201ENST00000279839 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
CWC15-201ENST00000279839 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CWC15-201ENST00000279839 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
CWC15-201ENST00000279839 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
CWC15-201ENST00000279839 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
CWC15-201ENST00000279839 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
CWC15-201ENST00000279839 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
CWC15-201ENST00000279839 FBLN2P98095 1184 aa13.56□□□□□ -0.24
CWC15-201ENST00000279839 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
CWC15-201ENST00000279839 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
CWC15-201ENST00000279839 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
CWC15-201ENST00000279839 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
CWC15-201ENST00000279839 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.24
CWC15-201ENST00000279839 CUX1P39880 1505 aa13.51□□□□□ -0.25
CWC15-201ENST00000279839 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
CWC15-201ENST00000279839 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
CWC15-201ENST00000279839 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
CWC15-201ENST00000279839 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
CWC15-201ENST00000279839 CHD1O14646 1710 aa13.46□□□□□ -0.26
CWC15-201ENST00000279839 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.26
CWC15-201ENST00000279839 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.267e-7■■■□□ 18.5
CWC15-201ENST00000279839 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
CWC15-201ENST00000279839 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
CWC15-201ENST00000279839 HAX1O00165 279 aa13.41□□□□□ -0.26
CWC15-201ENST00000279839 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
CWC15-201ENST00000279839 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
CWC15-201ENST00000279839 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
CWC15-201ENST00000279839 PBRM1Q86U86 1689 aa13.37□□□□□ -0.27
CWC15-201ENST00000279839 SOGA1O94964 1423 aa13.36□□□□□ -0.27
CWC15-201ENST00000279839 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
CWC15-201ENST00000279839 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
CWC15-201ENST00000279839 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
CWC15-201ENST00000279839 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
CWC15-201ENST00000279839 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
CWC15-201ENST00000279839 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
CWC15-201ENST00000279839 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
CWC15-201ENST00000279839 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
CWC15-201ENST00000279839 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
CWC15-201ENST00000279839 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
CWC15-201ENST00000279839 EVX2Q03828 476 aa13.29□□□□□ -0.28
CWC15-201ENST00000279839 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
CWC15-201ENST00000279839 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
CWC15-201ENST00000279839 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
CWC15-201ENST00000279839 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
CWC15-201ENST00000279839 ABCA10Q8WWZ4 1543 aa13.25□□□□□ -0.29
CWC15-201ENST00000279839 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
CWC15-201ENST00000279839 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
CWC15-201ENST00000279839 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
CWC15-201ENST00000279839 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.29
CWC15-201ENST00000279839 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
CWC15-201ENST00000279839 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
CWC15-201ENST00000279839 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
CWC15-201ENST00000279839 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
CWC15-201ENST00000279839 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
CWC15-201ENST00000279839 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
CWC15-201ENST00000279839 CHMP7Q8WUX9 453 aaPredicted RBP13.13□□□□□ -0.31
CWC15-201ENST00000279839 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
CWC15-201ENST00000279839 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
CWC15-201ENST00000279839 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
CWC15-201ENST00000279839 CYB5RLQ6IPT4 315 aa13.08□□□□□ -0.32
CWC15-201ENST00000279839 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
CWC15-201ENST00000279839 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
CWC15-201ENST00000279839 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
CWC15-201ENST00000279839 NUP160Q12769 1436 aa13.04□□□□□ -0.32
CWC15-201ENST00000279839 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
CWC15-201ENST00000279839 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
CWC15-201ENST00000279839 CUL7Q14999 1698 aa12.97□□□□□ -0.33
CWC15-201ENST00000279839 GABBR2O75899 941 aa12.97□□□□□ -0.33
CWC15-201ENST00000279839 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
CWC15-201ENST00000279839 IGF1RP08069 1367 aa12.93□□□□□ -0.34
CWC15-201ENST00000279839 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
CWC15-201ENST00000279839 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.35
CWC15-201ENST00000279839 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
CWC15-201ENST00000279839 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
CWC15-201ENST00000279839 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
CWC15-201ENST00000279839 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
CWC15-201ENST00000279839 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
CWC15-201ENST00000279839 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
CWC15-201ENST00000279839 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
CWC15-201ENST00000279839 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
CWC15-201ENST00000279839 TTBK1Q5TCY1 1321 aaPredicted RBP12.8□□□□□ -0.36
CWC15-201ENST00000279839 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
CWC15-201ENST00000279839 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
CWC15-201ENST00000279839 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
CWC15-201ENST00000279839 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
CWC15-201ENST00000279839 DISP1Q96F81 1524 aa12.74□□□□□ -0.37
CWC15-201ENST00000279839 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
CWC15-201ENST00000279839 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
CWC15-201ENST00000279839 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
CWC15-201ENST00000279839 LHX8Q68G74 356 aa12.72□□□□□ -0.37
CWC15-201ENST00000279839 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
CWC15-201ENST00000279839 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
CWC15-201ENST00000279839 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
CWC15-201ENST00000279839 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
CWC15-201ENST00000279839 CLCN6P51797 869 aa12.69□□□□□ -0.38
CWC15-201ENST00000279839 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
CWC15-201ENST00000279839 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
CWC15-201ENST00000279839 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
CWC15-201ENST00000279839 PTPRGP23470 1445 aa12.66□□□□□ -0.38
CWC15-201ENST00000279839 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms