RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
CD164-201ENST00000275080 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
CD164-201ENST00000275080 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
CD164-201ENST00000275080 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
CD164-201ENST00000275080 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
CD164-201ENST00000275080 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
CD164-201ENST00000275080 CUX2O14529 1486 aa12.98□□□□□ -0.33
CD164-201ENST00000275080 NEFLP07196 543 aa12.96□□□□□ -0.34
CD164-201ENST00000275080 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
CD164-201ENST00000275080 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CD164-201ENST00000275080 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CD164-201ENST00000275080 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 ANP32CO43423 234 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 CLSPNQ9HAW4 1339 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
CD164-201ENST00000275080 MYT1Q01538 1121 aa12.92□□□□□ -0.34
CD164-201ENST00000275080 POLR3GLQ9BT43 218 aa12.91□□□□□ -0.34
CD164-201ENST00000275080 RRP7BPQ9NSQ0 103 aa12.9□□□□□ -0.34
CD164-201ENST00000275080 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
CD164-201ENST00000275080 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
CD164-201ENST00000275080 FOXD1Q16676 465 aa12.88□□□□□ -0.35
CD164-201ENST00000275080 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
CD164-201ENST00000275080 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
CD164-201ENST00000275080 SETD5Q9C0A6 1442 aa12.87□□□□□ -0.35
CD164-201ENST00000275080 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
CD164-201ENST00000275080 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
CD164-201ENST00000275080 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
CD164-201ENST00000275080 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
CD164-201ENST00000275080 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
CD164-201ENST00000275080 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
CD164-201ENST00000275080 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
CD164-201ENST00000275080 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
CD164-201ENST00000275080 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
CD164-201ENST00000275080 TIAM1Q13009 1591 aa12.82□□□□□ -0.36
CD164-201ENST00000275080 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
CD164-201ENST00000275080 NESP48681 1621 aa12.82□□□□□ -0.36
CD164-201ENST00000275080 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
CD164-201ENST00000275080 CUL7Q14999 1698 aa12.81□□□□□ -0.36
CD164-201ENST00000275080 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
CD164-201ENST00000275080 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
CD164-201ENST00000275080 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
CD164-201ENST00000275080 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
CD164-201ENST00000275080 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.36
CD164-201ENST00000275080 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.36
CD164-201ENST00000275080 CCDC184Q52MB2 194 aa12.77□□□□□ -0.36
CD164-201ENST00000275080 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
CD164-201ENST00000275080 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
CD164-201ENST00000275080 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
CD164-201ENST00000275080 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
CD164-201ENST00000275080 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
CD164-201ENST00000275080 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
CD164-201ENST00000275080 CTTNBP2Q8WZ74 1663 aa12.74□□□□□ -0.37
CD164-201ENST00000275080 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
CD164-201ENST00000275080 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
CD164-201ENST00000275080 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.372e-10■■■■□ 24.3
CD164-201ENST00000275080 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
CD164-201ENST00000275080 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
CD164-201ENST00000275080 B4GALNT3Q6L9W6 998 aa12.7□□□□□ -0.38
CD164-201ENST00000275080 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
CD164-201ENST00000275080 CASKIN1Q8WXD9 1431 aa12.69□□□□□ -0.38
CD164-201ENST00000275080 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
CD164-201ENST00000275080 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
CD164-201ENST00000275080 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
CD164-201ENST00000275080 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
CD164-201ENST00000275080 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
CD164-201ENST00000275080 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
CD164-201ENST00000275080 MSH5O43196 834 aa12.66□□□□□ -0.38
CD164-201ENST00000275080 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
CD164-201ENST00000275080 PTPRKQ15262 1439 aa12.65□□□□□ -0.38
CD164-201ENST00000275080 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
CD164-201ENST00000275080 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
CD164-201ENST00000275080 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
CD164-201ENST00000275080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.391e-7■■■□□ 18.7
CD164-201ENST00000275080 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
CD164-201ENST00000275080 SAMD9Q5K651 1589 aa12.63□□□□□ -0.39
CD164-201ENST00000275080 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
CD164-201ENST00000275080 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
CD164-201ENST00000275080 ZNF644Q9H582 1327 aaPredicted RBP12.61□□□□□ -0.39
CD164-201ENST00000275080 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
CD164-201ENST00000275080 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
CD164-201ENST00000275080 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
CD164-201ENST00000275080 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
CD164-201ENST00000275080 FBLN2P98095 1184 aa12.59□□□□□ -0.39
CD164-201ENST00000275080 NBR1Q14596 966 aa12.59□□□□□ -0.39
CD164-201ENST00000275080 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
CD164-201ENST00000275080 FGD6Q6ZV73 1430 aa12.59□□□□□ -0.39
CD164-201ENST00000275080 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
CD164-201ENST00000275080 WDR62O43379 1518 aa12.58□□□□□ -0.4
CD164-201ENST00000275080 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
CD164-201ENST00000275080 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
CD164-201ENST00000275080 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
CD164-201ENST00000275080 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
CD164-201ENST00000275080 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
CD164-201ENST00000275080 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
CD164-201ENST00000275080 PRKRIP1Q9H875 184 aaPredicted RBP12.52□□□□□ -0.4
CD164-201ENST00000275080 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
CD164-201ENST00000275080 NAIPQ13075 1403 aa12.52□□□□□ -0.41
CD164-201ENST00000275080 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms