RNA–Protein interactions for RNA: ENST00000270776.12

PGD-201, Transcript of phosphogluconate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGD, Length 1,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-201ENST00000270776 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
PGD-201ENST00000270776 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
PGD-201ENST00000270776 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
PGD-201ENST00000270776 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
PGD-201ENST00000270776 IQGAP2Q13576 1575 aa22.64■■□□□ 1.21
PGD-201ENST00000270776 CTTNBP2Q8WZ74 1663 aa22.61■■□□□ 1.21
PGD-201ENST00000270776 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
PGD-201ENST00000270776 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
PGD-201ENST00000270776 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.2
PGD-201ENST00000270776 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
PGD-201ENST00000270776 RIMBP3CA6NJZ7 1639 aa22.55■■□□□ 1.2
PGD-201ENST00000270776 RIMBP3BA6NNM3 1639 aa22.55■■□□□ 1.2
PGD-201ENST00000270776 RIMBP3Q9UFD9 1639 aa22.55■■□□□ 1.2
PGD-201ENST00000270776 UGGT2Q9NYU1 1516 aa22.54■■□□□ 1.2
PGD-201ENST00000270776 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
PGD-201ENST00000270776 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
PGD-201ENST00000270776 CARMIL2Q6F5E8 1435 aa22.46■■□□□ 1.19
PGD-201ENST00000270776 ARAP1Q96P48 1450 aa22.45■■□□□ 1.19
PGD-201ENST00000270776 TNIKQ9UKE5 1360 aa22.45■■□□□ 1.19
PGD-201ENST00000270776 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
PGD-201ENST00000270776 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
PGD-201ENST00000270776 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
PGD-201ENST00000270776 SAMD9Q5K651 1589 aa22.39■■□□□ 1.17
PGD-201ENST00000270776 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
PGD-201ENST00000270776 PTPRGP23470 1445 aa22.35■■□□□ 1.17
PGD-201ENST00000270776 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
PGD-201ENST00000270776 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
PGD-201ENST00000270776 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
PGD-201ENST00000270776 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
PGD-201ENST00000270776 CLIP1P30622 1438 aa22.27■■□□□ 1.16
PGD-201ENST00000270776 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
PGD-201ENST00000270776 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
PGD-201ENST00000270776 PLB1Q6P1J6 1458 aa22.21■■□□□ 1.15
PGD-201ENST00000270776 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
PGD-201ENST00000270776 ABCA8O94911 1581 aa22.17■■□□□ 1.14
PGD-201ENST00000270776 UHRF1BP1LA0JNW5 1464 aa22.16■■□□□ 1.14
PGD-201ENST00000270776 ABCC2Q92887 1545 aa22.15■■□□□ 1.14
PGD-201ENST00000270776 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
PGD-201ENST00000270776 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
PGD-201ENST00000270776 KDM5BQ9UGL1 1544 aa22.07■■□□□ 1.12
PGD-201ENST00000270776 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
PGD-201ENST00000270776 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
PGD-201ENST00000270776 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
PGD-201ENST00000270776 ATP10BO94823 1461 aa22.01■■□□□ 1.11
PGD-201ENST00000270776 ARID3CA6NKF2 412 aa22■■□□□ 1.11
PGD-201ENST00000270776 ZCCHC11Q5TAX3 1644 aaKnown RBP21.99■■□□□ 1.11
PGD-201ENST00000270776 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
PGD-201ENST00000270776 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
PGD-201ENST00000270776 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
PGD-201ENST00000270776 FYCO1Q9BQS8 1478 aa21.97■■□□□ 1.11
PGD-201ENST00000270776 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
PGD-201ENST00000270776 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
PGD-201ENST00000270776 EPRSP07814 1512 aaKnown RBP21.95■■□□□ 1.1
PGD-201ENST00000270776 ASXL2Q76L83 1435 aa21.93■■□□□ 1.1
PGD-201ENST00000270776 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
PGD-201ENST00000270776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
PGD-201ENST00000270776 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
PGD-201ENST00000270776 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.1
PGD-201ENST00000270776 CCDC18Q5T9S5 1454 aa21.87■■□□□ 1.09
PGD-201ENST00000270776 WDR7Q9Y4E6 1490 aa21.87■■□□□ 1.09
PGD-201ENST00000270776 ABCC10Q5T3U5 1492 aa21.85■■□□□ 1.09
PGD-201ENST00000270776 PLEKHD1A6NEE1 506 aa21.83■■□□□ 1.09
PGD-201ENST00000270776 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
PGD-201ENST00000270776 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
PGD-201ENST00000270776 DIP2BQ9P265 1576 aa21.8■■□□□ 1.08
PGD-201ENST00000270776 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
PGD-201ENST00000270776 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
PGD-201ENST00000270776 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
PGD-201ENST00000270776 KIF13AQ9H1H9 1805 aa21.75■■□□□ 1.07
PGD-201ENST00000270776 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
PGD-201ENST00000270776 GLI2P10070 1586 aa21.74■■□□□ 1.07
PGD-201ENST00000270776 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
PGD-201ENST00000270776 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
PGD-201ENST00000270776 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
PGD-201ENST00000270776 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
PGD-201ENST00000270776 APLP2Q06481 763 aa21.68■■□□□ 1.06
PGD-201ENST00000270776 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
PGD-201ENST00000270776 ABCA9Q8IUA7 1624 aa21.67■■□□□ 1.06
PGD-201ENST00000270776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.67■■□□□ 1.063e-9■■■□□ 15.8
PGD-201ENST00000270776 KIF14Q15058 1648 aa21.66■■□□□ 1.06
PGD-201ENST00000270776 MAP3K4Q9Y6R4 1608 aa21.66■■□□□ 1.06
PGD-201ENST00000270776 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
PGD-201ENST00000270776 CD109Q6YHK3 1445 aa21.64■■□□□ 1.05
PGD-201ENST00000270776 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
PGD-201ENST00000270776 TTC37Q6PGP7 1564 aa21.62■■□□□ 1.05
PGD-201ENST00000270776 PPRC1Q5VV67 1664 aaKnown RBP21.57■■□□□ 1.04
PGD-201ENST00000270776 TSPOAP1O95153 1857 aa21.57■■□□□ 1.04
PGD-201ENST00000270776 PLCH2O75038 1416 aa21.55■■□□□ 1.04
PGD-201ENST00000270776 NCOA2Q15596 1464 aa21.54■■□□□ 1.04
PGD-201ENST00000270776 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
PGD-201ENST00000270776 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.04
PGD-201ENST00000270776 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
PGD-201ENST00000270776 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
PGD-201ENST00000270776 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
PGD-201ENST00000270776 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
PGD-201ENST00000270776 FANCAO15360 1455 aa21.48■■□□□ 1.03
PGD-201ENST00000270776 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
PGD-201ENST00000270776 PREX2Q70Z35 1606 aa21.47■■□□□ 1.03
PGD-201ENST00000270776 PPARGC1BQ86YN6 1023 aaKnown RBP21.47■■□□□ 1.03
PGD-201ENST00000270776 CDC42BPBQ9Y5S2 1711 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms