RNA–Protein interactions for RNA: ENST00000268057.8

BBS4-201, Transcript of Bardet-Biedl syndrome 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-201ENST00000268057 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
BBS4-201ENST00000268057 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
BBS4-201ENST00000268057 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
BBS4-201ENST00000268057 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
BBS4-201ENST00000268057 RUSC2Q8N2Y8 1516 aa12.8□□□□□ -0.36
BBS4-201ENST00000268057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
BBS4-201ENST00000268057 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
BBS4-201ENST00000268057 TOP2BQ02880 1626 aa12.77□□□□□ -0.36
BBS4-201ENST00000268057 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
BBS4-201ENST00000268057 ACIN1Q9UKV3 1341 aaKnown RBP12.76□□□□□ -0.37
BBS4-201ENST00000268057 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
BBS4-201ENST00000268057 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
BBS4-201ENST00000268057 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
BBS4-201ENST00000268057 MAPKBP1O60336 1514 aa12.74□□□□□ -0.37
BBS4-201ENST00000268057 CLIP1P30622 1438 aa12.73□□□□□ -0.37
BBS4-201ENST00000268057 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
BBS4-201ENST00000268057 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
BBS4-201ENST00000268057 DIEXFQ68CQ4 756 aaKnown RBP12.72□□□□□ -0.37
BBS4-201ENST00000268057 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
BBS4-201ENST00000268057 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
BBS4-201ENST00000268057 KDM6BO15054 1643 aa12.7□□□□□ -0.38
BBS4-201ENST00000268057 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
BBS4-201ENST00000268057 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
BBS4-201ENST00000268057 NUP160Q12769 1436 aa12.69□□□□□ -0.38
BBS4-201ENST00000268057 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
BBS4-201ENST00000268057 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
BBS4-201ENST00000268057 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
BBS4-201ENST00000268057 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
BBS4-201ENST00000268057 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
BBS4-201ENST00000268057 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
BBS4-201ENST00000268057 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
BBS4-201ENST00000268057 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
BBS4-201ENST00000268057 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
BBS4-201ENST00000268057 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
BBS4-201ENST00000268057 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
BBS4-201ENST00000268057 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
BBS4-201ENST00000268057 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
BBS4-201ENST00000268057 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
BBS4-201ENST00000268057 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
BBS4-201ENST00000268057 CUX1P39880 1505 aa12.57□□□□□ -0.4
BBS4-201ENST00000268057 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
BBS4-201ENST00000268057 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
BBS4-201ENST00000268057 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
BBS4-201ENST00000268057 GLI2P10070 1586 aa12.54□□□□□ -0.4
BBS4-201ENST00000268057 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
BBS4-201ENST00000268057 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
BBS4-201ENST00000268057 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
BBS4-201ENST00000268057 MYT1Q01538 1121 aa12.52□□□□□ -0.4
BBS4-201ENST00000268057 APLP2Q06481 763 aa12.51□□□□□ -0.41
BBS4-201ENST00000268057 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
BBS4-201ENST00000268057 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
BBS4-201ENST00000268057 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
BBS4-201ENST00000268057 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
BBS4-201ENST00000268057 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
BBS4-201ENST00000268057 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
BBS4-201ENST00000268057 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
BBS4-201ENST00000268057 ARHGAP35Q9NRY4 1499 aa12.42□□□□□ -0.42
BBS4-201ENST00000268057 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
BBS4-201ENST00000268057 KIAA0586Q9BVV6 1533 aa12.41□□□□□ -0.42
BBS4-201ENST00000268057 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
BBS4-201ENST00000268057 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
BBS4-201ENST00000268057 TSPOAP1O95153 1857 aa12.39□□□□□ -0.43
BBS4-201ENST00000268057 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
BBS4-201ENST00000268057 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
BBS4-201ENST00000268057 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
BBS4-201ENST00000268057 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
BBS4-201ENST00000268057 MIER1Q8N108 512 aa12.37□□□□□ -0.43
BBS4-201ENST00000268057 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
BBS4-201ENST00000268057 LMTK3Q96Q04 1460 aa12.35□□□□□ -0.43
BBS4-201ENST00000268057 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
BBS4-201ENST00000268057 ABCC2Q92887 1545 aa12.34□□□□□ -0.43
BBS4-201ENST00000268057 ADRA2BP18089 450 aa12.32□□□□□ -0.44
BBS4-201ENST00000268057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
BBS4-201ENST00000268057 IGF1RP08069 1367 aa12.31□□□□□ -0.44
BBS4-201ENST00000268057 SOCS7O14512 581 aa12.3□□□□□ -0.44
BBS4-201ENST00000268057 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
BBS4-201ENST00000268057 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
BBS4-201ENST00000268057 LRRC9Q6ZRR7 1453 aa12.29□□□□□ -0.44
BBS4-201ENST00000268057 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
BBS4-201ENST00000268057 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
BBS4-201ENST00000268057 FOXD1Q16676 465 aa12.26□□□□□ -0.45
BBS4-201ENST00000268057 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
BBS4-201ENST00000268057 CUL7Q14999 1698 aa12.25□□□□□ -0.45
BBS4-201ENST00000268057 PTPRGP23470 1445 aa12.25□□□□□ -0.45
BBS4-201ENST00000268057 FYCO1Q9BQS8 1478 aa12.25□□□□□ -0.45
BBS4-201ENST00000268057 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
BBS4-201ENST00000268057 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
BBS4-201ENST00000268057 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
BBS4-201ENST00000268057 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
BBS4-201ENST00000268057 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
BBS4-201ENST00000268057 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
BBS4-201ENST00000268057 KDM5BQ9UGL1 1544 aa12.21□□□□□ -0.45
BBS4-201ENST00000268057 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.46
BBS4-201ENST00000268057 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
BBS4-201ENST00000268057 CASKIN1Q8WXD9 1431 aa12.19□□□□□ -0.46
BBS4-201ENST00000268057 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
BBS4-201ENST00000268057 COL17A1Q9UMD9 1497 aaPredicted RBP12.18□□□□□ -0.46
BBS4-201ENST00000268057 YTHDC1Q96MU7 727 aaKnown RBP12.18□□□□□ -0.46
BBS4-201ENST00000268057 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
BBS4-201ENST00000268057 UACAQ9BZF9 1416 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms